Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:28:33 (20823): wrapper (7.7.26015): starting
16:28:33 (20823): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:28:33] Arguments: --nthreads 8
[2025-06-04 16:28:33] Threads: 8
[2025-06-04 16:28:33] Checking for CVMFS
[2025-06-04 16:28:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:28:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:28:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:28:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:28:34] 2.11.2.0 2871 9013 76580 146793 2 1 17740250 20275200 1 130560 0 3240171 99.986 1367700 45626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 16:28:34] CVMFS is ok
[2025-06-04 16:28:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:28:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:28:34] Further information can be found at the LHC@home message board.
[2025-06-04 16:28:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:28:34] Checking for apptainer binary...
[2025-06-04 16:28:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:28:34] Running /usr/bin/apptainer --version
[2025-06-04 16:28:34] apptainer version 1.3.2-1.el7
[2025-06-04 16:28:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:28:36] c-115-7.aglt2.org
[2025-06-04 16:28:36] apptainer works
[2025-06-04 16:28:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:28:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:28:36] Starting ATLAS job with PandaID=6680029334
[2025-06-04 16:28:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:11:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:11:17] 2025-06-04 22:11:01,003 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:11:17] 2025-06-04 22:11:01,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:11:17] 2025-06-04 22:11:01,004 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:11:17] 2025-06-04 22:11:01,004 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:11:17] 2025-06-04 22:11:01,007 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:11:17] 2025-06-04 22:11:01,008 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,008 | INFO     | sum of deviations: 738457947.9999992
[2025-06-04 18:11:17] 2025-06-04 22:11:01,009 | INFO     | mean x: 1749071985.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,009 | INFO     | mean y: 2578456.92
[2025-06-04 18:11:17] 2025-06-04 22:11:01,009 | INFO     | -- intersect: -4163221974.722028
[2025-06-04 18:11:17] 2025-06-04 22:11:01,009 | INFO     | intersect: -4163221974.722028
[2025-06-04 18:11:17] 2025-06-04 22:11:01,010 | INFO     | chi2: 1.7190711812258068
[2025-06-04 18:11:17] 2025-06-04 22:11:01,010 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,010 | INFO     | sum of deviations: 1479373219.9999967
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | mean x: 1749071833.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | mean y: 2581012.9789473685
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | -- intersect: -9731260769.957684
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | intersect: -9731260769.957684
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | chi2: 1.7229493995329475
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | current chi2=1.7229493995329475 (change=-0.22559963481996245 %)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,011 | INFO     | right removable region: 94
[2025-06-04 18:11:17] 2025-06-04 22:11:01,012 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,012 | INFO     | sum of deviations: -15419774101.999998
[2025-06-04 18:11:17] 2025-06-04 22:11:01,012 | INFO     | mean x: 1749072138.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,012 | INFO     | mean y: 2632966.4210526315
[2025-06-04 18:11:17] 2025-06-04 22:11:01,013 | INFO     | -- intersect: 101460240540.62823
[2025-06-04 18:11:17] 2025-06-04 22:11:01,013 | INFO     | intersect: 101460240540.62823
[2025-06-04 18:11:17] 2025-06-04 22:11:01,013 | INFO     | chi2: 0.11545886168758838
[2025-06-04 18:11:17] 2025-06-04 22:11:01,013 | INFO     | current chi2=0.11545886168758838 (change=93.28364858020254 %)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,013 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,014 | INFO     | sum of deviations: -15672791030.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,014 | INFO     | mean x: 1749072290.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,014 | INFO     | mean y: 2633717.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,014 | INFO     | -- intersect: 121286147379.37465
[2025-06-04 18:11:17] 2025-06-04 22:11:01,014 | INFO     | intersect: 121286147379.37465
[2025-06-04 18:11:17] 2025-06-04 22:11:01,015 | INFO     | chi2: 0.0768732896018504
[2025-06-04 18:11:17] 2025-06-04 22:11:01,015 | INFO     | current chi2=0.0768732896018504 (change=33.41932487620035 %)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,015 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,015 | INFO     | sum of deviations: -13648088699.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,015 | INFO     | mean x: 1749072443.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,016 | INFO     | mean y: 2625030.494117647
[2025-06-04 18:11:17] 2025-06-04 22:11:01,016 | INFO     | -- intersect: 125375777661.19647
[2025-06-04 18:11:17] 2025-06-04 22:11:01,016 | INFO     | intersect: 125375777661.19647
[2025-06-04 18:11:17] 2025-06-04 22:11:01,016 | INFO     | chi2: 0.07607859523924938
[2025-06-04 18:11:17] 2025-06-04 22:11:01,016 | INFO     | current chi2=0.07607859523924938 (change=1.03377176483142 %)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,016 | INFO     | left removable region: 30
[2025-06-04 18:11:17] 2025-06-04 22:11:01,017 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,017 | INFO     | sum of deviations: -6196967643.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,017 | INFO     | mean x: 1749072717.5
[2025-06-04 18:11:17] 2025-06-04 22:11:01,017 | INFO     | mean y: 2593343.453125
[2025-06-04 18:11:17] 2025-06-04 22:11:01,017 | INFO     | -- intersect: 133377703185.27895
[2025-06-04 18:11:17] 2025-06-04 22:11:01,017 | INFO     | intersect: 133377703185.27895
[2025-06-04 18:11:17] 2025-06-04 22:11:01,018 | INFO     | chi2: 0.0670832554880235
[2025-06-04 18:11:17] 2025-06-04 22:11:01,018 | INFO     | -- intersect: 133377703185.27895
[2025-06-04 18:11:17] 2025-06-04 22:11:01,018 | INFO     | current memory leak: -76.25 B/s (using 64 data points, chi2=0.07)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,018 | INFO     | ..............................
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . Timing measurements:
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . get job = 0 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . initial setup = 2 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . payload setup = 11 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . stage-in = 0 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . payload execution = 6089 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . stage-out = 0 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | . log creation = 0 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,019 | INFO     | ..............................
[2025-06-04 18:11:17] 2025-06-04 22:11:01,443 | INFO     | 
[2025-06-04 18:11:17] 2025-06-04 22:11:01,443 | INFO     | job summary report
[2025-06-04 18:11:17] 2025-06-04 22:11:01,444 | INFO     | --------------------------------------------------
[2025-06-04 18:11:17] 2025-06-04 22:11:01,444 | INFO     | PanDA job id: 6680029334
[2025-06-04 18:11:17] 2025-06-04 22:11:01,444 | INFO     | task id: 45006595
[2025-06-04 18:11:17] 2025-06-04 22:11:01,444 | INFO     | errors: (none)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,444 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:11:17] 2025-06-04 22:11:01,445 | INFO     | pilot state: finished 
[2025-06-04 18:11:17] 2025-06-04 22:11:01,445 | INFO     | transexitcode: 0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,445 | INFO     | exeerrorcode: 0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,445 | INFO     | exeerrordiag: 
[2025-06-04 18:11:17] 2025-06-04 22:11:01,445 | INFO     | exitcode: 0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,445 | INFO     | exitmsg: OK
[2025-06-04 18:11:17] 2025-06-04 22:11:01,446 | INFO     | cpuconsumptiontime: 44914 s
[2025-06-04 18:11:17] 2025-06-04 22:11:01,446 | INFO     | nevents: 400
[2025-06-04 18:11:17] 2025-06-04 22:11:01,446 | INFO     | neventsw: 0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,446 | INFO     | pid: 31024
[2025-06-04 18:11:17] 2025-06-04 22:11:01,446 | INFO     | pgrp: 31024
[2025-06-04 18:11:17] 2025-06-04 22:11:01,446 | INFO     | corecount: 8
[2025-06-04 18:11:17] 2025-06-04 22:11:01,447 | INFO     | event service: False
[2025-06-04 18:11:17] 2025-06-04 22:11:01,447 | INFO     | sizes: {0: 2397070, 1: 2397269, 7: 2397475, 12: 2397503, 6105: 2424131, 6107: 2433256, 6112: 2433370}
[2025-06-04 18:11:17] 2025-06-04 22:11:01,447 | INFO     | --------------------------------------------------
[2025-06-04 18:11:17] 2025-06-04 22:11:01,447 | INFO     | 
[2025-06-04 18:11:17] 2025-06-04 22:11:01,447 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 18:11:17] 2025-06-04 22:11:01,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,476 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,476 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,476 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,479 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,479 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,479 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:11:17] 2025-06-04 22:11:01,479 | INFO     | job 6680029334 has completed (purged errors)
[2025-06-04 18:11:17] 2025-06-04 22:11:01,480 | INFO     | overall cleanup function is called
[2025-06-04 18:11:17] 2025-06-04 22:11:02,487 | INFO     | --- collectZombieJob: --- 10, [31024]
[2025-06-04 18:11:17] 2025-06-04 22:11:02,488 | INFO     | zombie collector waiting for pid 31024
[2025-06-04 18:11:17] 2025-06-04 22:11:02,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:11:17] 2025-06-04 22:11:02,488 | INFO     | collected zombie processes
[2025-06-04 18:11:17] 2025-06-04 22:11:02,488 | INFO     | will attempt to kill all subprocesses of pid=31024
[2025-06-04 18:11:17] 2025-06-04 22:11:02,575 | INFO     | process IDs to be killed: [31024] (in reverse order)
[2025-06-04 18:11:17] 2025-06-04 22:11:02,633 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:11:17] 2025-06-04 22:11:02,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:11:17] 2025-06-04 22:11:02,638 | INFO     | did not find any defunct processes belonging to 31024
[2025-06-04 18:11:17] 2025-06-04 22:11:02,641 | INFO     | did not find any defunct processes belonging to 31024
[2025-06-04 18:11:17] 2025-06-04 22:11:02,641 | INFO     | ready for new job
[2025-06-04 18:11:17] 2025-06-04 22:11:02,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:11:17] 2025-06-04 22:11:02,642 | INFO     | **************************************
[2025-06-04 18:11:17] 2025-06-04 22:11:02,642 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:11:17] 2025-06-04 22:11:02,642 | INFO     | **************************************
[2025-06-04 18:11:17] 2025-06-04 22:11:02,643 | INFO     | 
[2025-06-04 18:11:17] 2025-06-04 22:11:02,643 | INFO     | architecture information:
[2025-06-04 18:11:17] 2025-06-04 22:11:02,644 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:11:17] 2025-06-04 22:11:02,661 | INFO     | cat /etc/os-release:
[2025-06-04 18:11:17] NAME="CentOS Linux"
[2025-06-04 18:11:17] VERSION="7 (Core)"
[2025-06-04 18:11:17] ID="centos"
[2025-06-04 18:11:17] ID_LIKE="rhel fedora"
[2025-06-04 18:11:17] VERSION_ID="7"
[2025-06-04 18:11:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:11:17] ANSI_COLOR="0;31"
[2025-06-04 18:11:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:11:17] HOME_URL="https://www.centos.org/"
[2025-06-04 18:11:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:11:17] 
[2025-06-04 18:11:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:11:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:11:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:11:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:11:17] 
[2025-06-04 18:11:17] 2025-06-04 22:11:02,661 | INFO     | **************************************
[2025-06-04 18:11:17] 2025-06-04 22:11:03,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 18:11:17] 2025-06-04 22:11:03,185 | INFO     | sufficient remaining disk space (18639486976 B)
[2025-06-04 18:11:17] 2025-06-04 22:11:03,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:11:17] 2025-06-04 22:11:03,186 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:11:17] 2025-06-04 22:11:03,186 | INFO     | update_server=False
[2025-06-04 18:11:17] 2025-06-04 22:11:03,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:11:17] 2025-06-04 22:11:03,275 | INFO     | all job control threads have been joined
[2025-06-04 18:11:17] 2025-06-04 22:11:03,397 | INFO     | PID=24497 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 18:11:17] 2025-06-04 22:11:03,397 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:11:17] 2025-06-04 22:11:03,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:11:17] 2025-06-04 22:11:03,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:11:17] 2025-06-04 22:11:03,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:11:17] 2025-06-04 22:11:03,420 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 18:11:17] 2025-06-04 22:11:03,420 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 18:11:17] 2025-06-04 22:11:03,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:11:17] 2025-06-04 22:11:03,427 | INFO     | will abort loop
[2025-06-04 18:11:17] 2025-06-04 22:11:03,813 | INFO     | all payload control threads have been joined
[2025-06-04 18:11:17] 2025-06-04 22:11:04,192 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,240 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,281 | INFO     | [job] control thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,288 | INFO     | all data control threads have been joined
[2025-06-04 18:11:17] 2025-06-04 22:11:04,342 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,347 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,432 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,815 | INFO     | [payload] control thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:04,915 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,176 | INFO     | [job] validate thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,294 | INFO     | [data] control thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,409 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,425 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,667 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,680 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:05,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:11:17] 2025-06-04 22:11:06,114 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:11:17] 2025-06-04 22:11:07,119 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:09,992 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:11:17] 2025-06-04 22:11:11,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898868016960)>', '<ExcThread(monitor, started 139897595741952)>']
[2025-06-04 18:11:17] 2025-06-04 22:11:12,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:11:17] 2025-06-04 22:11:12,444 | INFO     | [monitor] control thread has ended
[2025-06-04 18:11:17] 2025-06-04 22:11:16,919 | INFO     | all workflow threads have been joined
[2025-06-04 18:11:17] 2025-06-04 22:11:16,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:11:17] 2025-06-04 22:11:16,920 | INFO     | traces error code: 0
[2025-06-04 18:11:17] 2025-06-04 22:11:16,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:11:17] 2025-06-04 22:11:17,014 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:11:17] 2025-06-04 22:11:17,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:11:17] 2025-06-04 22:11:17,024 [wrapper] pilotpid: 24497
[2025-06-04 18:11:17] 2025-06-04 22:11:17,028 [wrapper] Pilot exit status: 0
[2025-06-04 18:11:17] 2025-06-04 22:11:17,047 [wrapper] pandaids: 6680029334
[2025-06-04 18:11:17] 2025-06-04 22:11:17,092 [wrapper] cleanup supervisor_pilot 25640 24498
[2025-06-04 18:11:17] 2025-06-04 22:11:17,097 [wrapper] Test setup, not cleaning
[2025-06-04 18:11:17] 2025-06-04 22:11:17,101 [wrapper] apfmon messages muted
[2025-06-04 18:11:17] 2025-06-04 22:11:17,106 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:11:17] 2025-06-04 22:11:17,110 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:11:17]  *** Error codes and diagnostics ***
[2025-06-04 18:11:17]     "exeErrorCode": 0,
[2025-06-04 18:11:17]     "exeErrorDiag": "",
[2025-06-04 18:11:17]     "pilotErrorCode": 0,
[2025-06-04 18:11:17]     "pilotErrorDiag": "",
[2025-06-04 18:11:17]  *** Listing of results directory ***
[2025-06-04 18:11:17] total 395720
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 16:24 pilot3.tar.gz
[2025-06-04 18:11:17] -rwx------ 1 boincer umatlas     37140 Jun  4 16:28 runpilot2-wrapper.sh
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 16:28 queuedata.json
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas       100 Jun  4 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:11:17] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 16:28 run_atlas
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas       105 Jun  4 16:28 job.xml
[2025-06-04 18:11:17] -rw-r--r-- 2 boincer umatlas 215150311 Jun  4 16:28 EVNT.45006593._001587.pool.root.1
[2025-06-04 18:11:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 16:28 start_atlas.sh
[2025-06-04 18:11:17] drwxrwx--x 2 boincer umatlas      4096 Jun  4 16:28 shared
[2025-06-04 18:11:17] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 16:28 input.tar.gz
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas         0 Jun  4 16:28 boinc_lockfile
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 16:28 pandaJob.out
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas    987032 Jun  4 16:28 agis_schedconf.cvmfs.json
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas   1598969 Jun  4 16:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:11:17] drwx------ 4 boincer umatlas      4096 Jun  4 16:28 pilot3
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas      5823 Jun  4 18:03 init_data.xml
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas        95 Jun  4 18:10 pilot_heartbeat.json
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas 184437177 Jun  4 18:10 HITS.45006595._056912.pool.root.1
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas       529 Jun  4 18:10 boinc_task_state.xml
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas      1047 Jun  4 18:10 memory_monitor_summary.json
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas    330900 Jun  4 18:10 log.45006595._056912.job.log.tgz.1
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas      7749 Jun  4 18:11 heartbeat.json
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas        27 Jun  4 18:11 wrapper_checkpoint.txt
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 18:11 boinc_mmap_file
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas      4856 Jun  4 18:11 pilotlog.txt
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas    569914 Jun  4 18:11 log.45006595._056912.job.log.1
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas       357 Jun  4 18:11 output.list
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas       620 Jun  4 18:11 runtime_log
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas    921600 Jun  4 18:11 result.tar.gz
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 18:11 runtime_log.err
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas       657 Jun  4 18:11 opaKDmft9g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo2nKDmT6QJln.diag
[2025-06-04 18:11:17] -rw-r--r-- 1 boincer umatlas     20838 Jun  4 18:11 stderr.txt
[2025-06-04 18:11:17] HITS file was successfully produced:
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas 184437177 Jun  4 18:10 shared/HITS.pool.root.1
[2025-06-04 18:11:17]  *** Contents of shared directory: ***
[2025-06-04 18:11:17] total 391644
[2025-06-04 18:11:17] -rw-r--r-- 2 boincer umatlas 215150311 Jun  4 16:28 ATLAS.root_0
[2025-06-04 18:11:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 16:28 start_atlas.sh
[2025-06-04 18:11:17] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 16:28 input.tar.gz
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas 184437177 Jun  4 18:10 HITS.pool.root.1
[2025-06-04 18:11:17] -rw------- 1 boincer umatlas    921600 Jun  4 18:11 result.tar.gz
18:11:18 (20823): run_atlas exited; CPU time 44915.172812
18:11:18 (20823): called boinc_finish(0)

</stderr_txt>
]]>

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