Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:26:16 (3926291): wrapper (7.7.26015): starting
16:26:16 (3926291): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 16:26:16] Arguments: --nthreads 12
[2025-06-04 16:26:16] Threads: 12
[2025-06-04 16:26:16] Checking for CVMFS
[2025-06-04 16:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:26:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:26:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:26:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:26:16] 2.12.6.0 32194 1294 120136 146793 3 290 32241796 32935936 11030 16776704 0 7196759 99.774 3796035 39162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 16:26:16] CVMFS is ok
[2025-06-04 16:26:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:26:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:26:16] Further information can be found at the LHC@home message board.
[2025-06-04 16:26:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:26:16] Checking for apptainer binary...
[2025-06-04 16:26:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:26:16] Running /usr/bin/apptainer --version
[2025-06-04 16:26:16] apptainer version 1.4.1-1.el9
[2025-06-04 16:26:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:26:17] c6-1-24-4.aglt2.org
[2025-06-04 16:26:17] apptainer works
[2025-06-04 16:26:17] Set ATHENA_PROC_NUMBER=12
[2025-06-04 16:26:17] Set ATHENA_CORE_NUMBER=12
[2025-06-04 16:26:17] Starting ATLAS job with PandaID=6667102848
[2025-06-04 16:26:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:38:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:38:40]  is_tar=False
[2025-06-04 17:38:40]  lfn=log.44871837._068832.job.log.tgz.1
[2025-06-04 17:38:40]  mtime=0
[2025-06-04 17:38:40]  protocol_id=None
[2025-06-04 17:38:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:38:40]  replicas=None
[2025-06-04 17:38:40]  scope=mc23_13p6TeV
[2025-06-04 17:38:40]  status=None
[2025-06-04 17:38:40]  status_code=0
[2025-06-04 17:38:40]  storage_token=
[2025-06-04 17:38:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667102848/log.44871837._068832.job.log.tgz.1
[2025-06-04 17:38:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/dd/log.44871837._068832.job.log.tgz.1
[2025-06-04 17:38:40]  workdir=None
[2025-06-04 17:38:40] ]
[2025-06-04 17:38:40] 2025-06-04 21:38:23,335 | INFO     | transferring file log.44871837._068832.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667102848/log.44871837._068832.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 17:38:40] 2025-06-04 21:38:23,335 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667102848/log.44871837._068832.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._068832.job
[2025-06-04 17:38:40] 2025-06-04 21:38:23,348 | INFO     | adding to output.list: log.44871837._068832.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/dd/log.44871837._068832.job.log.tg
[2025-06-04 17:38:40] 2025-06-04 21:38:23,349 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:38:40] 2025-06-04 21:38:23,349 | INFO     | summary of transferred files:
[2025-06-04 17:38:40] 2025-06-04 21:38:23,349 | INFO     |  -- lfn=log.44871837._068832.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:38:40] 2025-06-04 21:38:23,349 | INFO     | stage-out finished correctly
[2025-06-04 17:38:40] 2025-06-04 21:38:23,441 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:38:40] 2025-06-04 21:38:23,781 | INFO     | job 6667102848 has state=finished
[2025-06-04 17:38:40] 2025-06-04 21:38:23,781 | INFO     | preparing for final server update for job 6667102848 in state='finished'
[2025-06-04 17:38:40] 2025-06-04 21:38:23,782 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:38:40] 2025-06-04 21:38:23,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:38:40] 2025-06-04 21:38:23,782 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:38:40] 2025-06-04 21:38:23,782 | INFO     | job 6667102848 has finished - writing final server update
[2025-06-04 17:38:40] 2025-06-04 21:38:23,782 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:38:40] 2025-06-04 21:38:23,797 | INFO     | executing command: lscpu
[2025-06-04 17:38:40] 2025-06-04 21:38:23,868 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:38:40] 2025-06-04 21:38:24,308 | WARNING  | process 3938935 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:38:40] 2025-06-04 21:38:24,309 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102848/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:38:40] 2025-06-04 21:38:24,616 | INFO     | number of running child processes to parent process 3938935: 1
[2025-06-04 17:38:40] 2025-06-04 21:38:24,616 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:38:40] 2025-06-04 21:38:25,808 | INFO     | PID=3929936 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 17:38:40] 2025-06-04 21:38:25,809 | INFO     | .. there are 15 such processes running
[2025-06-04 17:38:40] 2025-06-04 21:38:27,118 | INFO     | monitor loop #320: job 0:6667102848 is in state 'finished'
[2025-06-04 17:38:40] 2025-06-04 21:38:27,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:38:40] 2025-06-04 21:38:27,527 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 17:38:40] 2025-06-04 21:38:27,527 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102848/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:38:40] 2025-06-04 21:38:27,528 | INFO     | extracted standard info from prmon json
[2025-06-04 17:38:40] 2025-06-04 21:38:27,528 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:38:40] 2025-06-04 21:38:27,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:38:40] 2025-06-04 21:38:27,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:38:40] 2025-06-04 21:38:27,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:38:40] 2025-06-04 21:38:27,530 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:38:40] 2025-06-04 21:38:27,530 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | sum of deviations: -10873070629.5
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | mean x: 1749071038.5
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | mean y: 2653692.859375
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | -- intersect: 234019624711.02148
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | intersect: 234019624711.02148
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | chi2: 0.1480849216668623
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | -- intersect: 234019624711.02148
[2025-06-04 17:38:40] 2025-06-04 21:38:27,531 | INFO     | current memory leak: -133.80 B/s (using 64 data points, chi2=0.15)
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | ..............................
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . Timing measurements:
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . get job = 0 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . initial setup = 2 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . payload setup = 6 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . stage-in = 0 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . payload execution = 4290 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . stage-out = 0 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | . log creation = 0 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,532 | INFO     | ..............................
[2025-06-04 17:38:40] 2025-06-04 21:38:27,614 | INFO     | 
[2025-06-04 17:38:40] 2025-06-04 21:38:27,614 | INFO     | job summary report
[2025-06-04 17:38:40] 2025-06-04 21:38:27,614 | INFO     | --------------------------------------------------
[2025-06-04 17:38:40] 2025-06-04 21:38:27,614 | INFO     | PanDA job id: 6667102848
[2025-06-04 17:38:40] 2025-06-04 21:38:27,614 | INFO     | task id: 44871837
[2025-06-04 17:38:40] 2025-06-04 21:38:27,614 | INFO     | errors: (none)
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | pilot state: finished 
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | transexitcode: 0
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | exeerrorcode: 0
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | exeerrordiag: 
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | exitcode: 0
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | exitmsg: OK
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | cpuconsumptiontime: 46238 s
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | nevents: 400
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | neventsw: 0
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | pid: 3938935
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | pgrp: 3938935
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | corecount: 12
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | event service: False
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | sizes: {0: 2397165, 1: 2397420, 5: 2397626, 12: 2397682, 4301: 2423571, 4302: 2432696, 4306: 2432810}
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | --------------------------------------------------
[2025-06-04 17:38:40] 2025-06-04 21:38:27,615 | INFO     | 
[2025-06-04 17:38:40] 2025-06-04 21:38:27,616 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 17:38:40] 2025-06-04 21:38:27,634 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | job 6667102848 has completed (purged errors)
[2025-06-04 17:38:40] 2025-06-04 21:38:27,636 | INFO     | overall cleanup function is called
[2025-06-04 17:38:40] 2025-06-04 21:38:28,643 | INFO     | --- collectZombieJob: --- 10, [3938935]
[2025-06-04 17:38:40] 2025-06-04 21:38:28,644 | INFO     | zombie collector waiting for pid 3938935
[2025-06-04 17:38:40] 2025-06-04 21:38:28,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:38:40] 2025-06-04 21:38:28,644 | INFO     | collected zombie processes
[2025-06-04 17:38:40] 2025-06-04 21:38:28,644 | INFO     | will attempt to kill all subprocesses of pid=3938935
[2025-06-04 17:38:40] 2025-06-04 21:38:28,877 | INFO     | process IDs to be killed: [3938935] (in reverse order)
[2025-06-04 17:38:40] 2025-06-04 21:38:28,963 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:38:40] 2025-06-04 21:38:28,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:38:40] 2025-06-04 21:38:28,974 | INFO     | did not find any defunct processes belonging to 3938935
[2025-06-04 17:38:40] 2025-06-04 21:38:28,983 | INFO     | did not find any defunct processes belonging to 3938935
[2025-06-04 17:38:40] 2025-06-04 21:38:28,984 | INFO     | ready for new job
[2025-06-04 17:38:40] 2025-06-04 21:38:28,984 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:38:40] 2025-06-04 21:38:28,985 | INFO     | **************************************
[2025-06-04 17:38:40] 2025-06-04 21:38:28,985 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:38:40] 2025-06-04 21:38:28,985 | INFO     | **************************************
[2025-06-04 17:38:40] 2025-06-04 21:38:28,985 | INFO     | 
[2025-06-04 17:38:40] 2025-06-04 21:38:29,001 | INFO     | architecture information:
[2025-06-04 17:38:40] 2025-06-04 21:38:29,002 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:38:40] 2025-06-04 21:38:29,014 | INFO     | cat /etc/os-release:
[2025-06-04 17:38:40] NAME="CentOS Linux"
[2025-06-04 17:38:40] VERSION="7 (Core)"
[2025-06-04 17:38:40] ID="centos"
[2025-06-04 17:38:40] ID_LIKE="rhel fedora"
[2025-06-04 17:38:40] VERSION_ID="7"
[2025-06-04 17:38:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:38:40] ANSI_COLOR="0;31"
[2025-06-04 17:38:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:38:40] HOME_URL="https://www.centos.org/"
[2025-06-04 17:38:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:38:40] 
[2025-06-04 17:38:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:38:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:38:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:38:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:38:40] 
[2025-06-04 17:38:40] 2025-06-04 21:38:29,015 | INFO     | **************************************
[2025-06-04 17:38:40] 2025-06-04 21:38:29,517 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 17:38:40] 2025-06-04 21:38:29,533 | INFO     | sufficient remaining disk space (76263981056 B)
[2025-06-04 17:38:40] 2025-06-04 21:38:29,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:38:40] 2025-06-04 21:38:29,534 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:38:40] 2025-06-04 21:38:29,534 | INFO     | update_server=False
[2025-06-04 17:38:40] 2025-06-04 21:38:29,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:38:40] 2025-06-04 21:38:29,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:38:40] 2025-06-04 21:38:29,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:38:40] 2025-06-04 21:38:29,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:38:40] 2025-06-04 21:38:29,621 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 17:38:40] 2025-06-04 21:38:29,622 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 17:38:40] 2025-06-04 21:38:29,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:38:40] 2025-06-04 21:38:29,622 | INFO     | will abort loop
[2025-06-04 17:38:40] 2025-06-04 21:38:29,818 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:38:40] 2025-06-04 21:38:29,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:38:40] 2025-06-04 21:38:29,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:38:40] 2025-06-04 21:38:29,951 | INFO     | all data control threads have been joined
[2025-06-04 17:38:40] 2025-06-04 21:38:30,535 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:30,539 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:30,627 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:30,956 | INFO     | [data] control thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:30,988 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,019 | INFO     | all payload control threads have been joined
[2025-06-04 17:38:40] 2025-06-04 21:38:31,060 | INFO     | all job control threads have been joined
[2025-06-04 17:38:40] 2025-06-04 21:38:31,473 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,540 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,569 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,743 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,744 | INFO     | [job] validate thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,775 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,846 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:31,885 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:32,021 | INFO     | [payload] control thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:32,065 | INFO     | [job] control thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:33,540 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:38:40] 2025-06-04 21:38:35,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694545553216)>', '<ExcThread(monitor, started 140693917914880)>']
[2025-06-04 17:38:40] 2025-06-04 21:38:35,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:38:40] 2025-06-04 21:38:35,845 | INFO     | [monitor] control thread has ended
[2025-06-04 17:38:40] 2025-06-04 21:38:40,235 | INFO     | all workflow threads have been joined
[2025-06-04 17:38:40] 2025-06-04 21:38:40,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:38:40] 2025-06-04 21:38:40,236 | INFO     | traces error code: 0
[2025-06-04 17:38:40] 2025-06-04 21:38:40,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:38:40] 2025-06-04 21:38:40,375 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:38:40] 2025-06-04 21:38:40,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:38:40] 2025-06-04 21:38:40,381 [wrapper] pilotpid: 3929936
[2025-06-04 17:38:40] 2025-06-04 21:38:40,384 [wrapper] Pilot exit status: 0
[2025-06-04 17:38:40] 2025-06-04 21:38:40,395 [wrapper] pandaids: 6667102848
[2025-06-04 17:38:40] 2025-06-04 21:38:40,453 [wrapper] cleanup supervisor_pilot 4111368 3929937
[2025-06-04 17:38:40] 2025-06-04 21:38:40,455 [wrapper] Test setup, not cleaning
[2025-06-04 17:38:40] 2025-06-04 21:38:40,458 [wrapper] apfmon messages muted
[2025-06-04 17:38:40] 2025-06-04 21:38:40,461 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:38:40] 2025-06-04 21:38:40,463 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:38:40]  *** Error codes and diagnostics ***
[2025-06-04 17:38:40]     "exeErrorCode": 0,
[2025-06-04 17:38:40]     "exeErrorDiag": "",
[2025-06-04 17:38:40]     "pilotErrorCode": 0,
[2025-06-04 17:38:40]     "pilotErrorDiag": "",
[2025-06-04 17:38:40]  *** Listing of results directory ***
[2025-06-04 17:38:40] total 414120
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas      5111 May 27 10:30 queuedata.json
[2025-06-04 17:38:40] -rwx------. 1 boincer umatlas     37140 May 27 10:33 runpilot2-wrapper.sh
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas       100 Jun  4 16:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:38:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 16:26 run_atlas
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas       105 Jun  4 16:26 job.xml
[2025-06-04 17:38:40] -rw-r--r--. 2 boincer umatlas 224681185 Jun  4 16:26 EVNT.44871834._002707.pool.root.1
[2025-06-04 17:38:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:26 start_atlas.sh
[2025-06-04 17:38:40] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 16:26 shared
[2025-06-04 17:38:40] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 16:26 input.tar.gz
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas         0 Jun  4 16:26 boinc_lockfile
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 16:26 pandaJob.out
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas    987032 Jun  4 16:26 agis_schedconf.cvmfs.json
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas   1598969 Jun  4 16:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:38:40] drwx------. 4 boincer umatlas      4096 Jun  4 16:26 pilot3
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 17:36 init_data.xml
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas 193968424 Jun  4 17:37 HITS.44871837._068832.pool.root.1
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas        95 Jun  4 17:37 pilot_heartbeat.json
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas       529 Jun  4 17:38 boinc_task_state.xml
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas      1037 Jun  4 17:38 memory_monitor_summary.json
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas    362058 Jun  4 17:38 log.44871837._068832.job.log.tgz.1
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas      7727 Jun  4 17:38 heartbeat.json
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas        27 Jun  4 17:38 wrapper_checkpoint.txt
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 17:38 boinc_mmap_file
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas      4539 Jun  4 17:38 pilotlog.txt
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas    429550 Jun  4 17:38 log.44871837._068832.job.log.1
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas       357 Jun  4 17:38 output.list
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas       620 Jun  4 17:38 runtime_log
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas    808960 Jun  4 17:38 result.tar.gz
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 17:38 runtime_log.err
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas       654 Jun  4 17:38 HCaMDmPYAe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZwRKDmcHrTJm.diag
[2025-06-04 17:38:40] -rw-r--r--. 1 boincer umatlas     21560 Jun  4 17:38 stderr.txt
[2025-06-04 17:38:40] HITS file was successfully produced:
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas 193968424 Jun  4 17:37 shared/HITS.pool.root.1
[2025-06-04 17:38:40]  *** Contents of shared directory: ***
[2025-06-04 17:38:40] total 410152
[2025-06-04 17:38:40] -rw-r--r--. 2 boincer umatlas 224681185 Jun  4 16:26 ATLAS.root_0
[2025-06-04 17:38:40] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:26 start_atlas.sh
[2025-06-04 17:38:40] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 16:26 input.tar.gz
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas 193968424 Jun  4 17:37 HITS.pool.root.1
[2025-06-04 17:38:40] -rw-------. 1 boincer umatlas    808960 Jun  4 17:38 result.tar.gz
17:38:42 (3926291): run_atlas exited; CPU time 46323.218896
17:38:42 (3926291): called boinc_finish(0)

</stderr_txt>
]]>

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