Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:30 (661182): wrapper (7.7.26015): starting
23:27:30 (661182): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 23:27:30] Arguments: --nthreads 12
[2025-06-04 23:27:30] Threads: 12
[2025-06-04 23:27:30] Checking for CVMFS
[2025-06-04 23:27:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 23:27:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 23:27:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 23:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 23:27:30] 2.12.7.0 628303 62 54044 146795 1 56 3641295 4097024 0 130560 0 71388 99.984 72702 10119 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 23:27:30] CVMFS is ok
[2025-06-04 23:27:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 23:27:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 23:27:30] Further information can be found at the LHC@home message board.
[2025-06-04 23:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 23:27:30] Checking for apptainer binary...
[2025-06-04 23:27:30] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 23:27:30] apptainer is not installed, using version from CVMFS
[2025-06-04 23:27:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 23:27:30] pckelar5.cern.ch
[2025-06-04 23:27:30] apptainer works
[2025-06-04 23:27:30] Set ATHENA_PROC_NUMBER=12
[2025-06-04 23:27:30] Set ATHENA_CORE_NUMBER=12
[2025-06-04 23:27:30] Starting ATLAS job with PandaID=6680028435
[2025-06-04 23:27:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:31:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:31:44]  filesize=362679
[2025-06-05 00:31:44]  filetype=log
[2025-06-05 00:31:44]  guid=9b34c0b8-3a1f-4038-a6a3-57fb59726264
[2025-06-05 00:31:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 00:31:44]  is_altstaged=None
[2025-06-05 00:31:44]  is_tar=False
[2025-06-05 00:31:44]  lfn=log.45006595._056903.job.log.tgz.1
[2025-06-05 00:31:44]  mtime=0
[2025-06-05 00:31:44]  protocol_id=None
[2025-06-05 00:31:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 00:31:44]  replicas=None
[2025-06-05 00:31:44]  scope=mc23_13p6TeV
[2025-06-05 00:31:44]  status=None
[2025-06-05 00:31:44]  status_code=0
[2025-06-05 00:31:44]  storage_token=
[2025-06-05 00:31:44]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6680028435/log.45006595._056903.job.log.tgz.1
[2025-06-05 00:31:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/68/log.45006595._056903.job.log.tgz.1
[2025-06-05 00:31:44]  workdir=None
[2025-06-05 00:31:44] ]
[2025-06-05 00:31:44] 2025-06-04 22:31:19,792 | INFO     | transferring file log.45006595._056903.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6680028435/log.45006595._056903.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 00:31:44] 2025-06-04 22:31:19,793 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6680028435/log.45006595._056903.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._056903.job
[2025-06-05 00:31:44] 2025-06-04 22:31:19,806 | INFO     | adding to output.list: log.45006595._056903.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/68/log.45006595._056903.job.log.tg
[2025-06-05 00:31:44] 2025-06-04 22:31:19,807 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 00:31:44] 2025-06-04 22:31:19,807 | INFO     | summary of transferred files:
[2025-06-05 00:31:44] 2025-06-04 22:31:19,807 | INFO     |  -- lfn=log.45006595._056903.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 00:31:44] 2025-06-04 22:31:19,807 | INFO     | stage-out finished correctly
[2025-06-05 00:31:44] 2025-06-04 22:31:21,047 | INFO     | monitor loop #289: job 0:6680028435 is in state 'finished'
[2025-06-05 00:31:44] 2025-06-04 22:31:21,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:31:44] 2025-06-04 22:31:22,046 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 00:31:44] 2025-06-04 22:31:22,108 | INFO     | job 6680028435 has state=finished
[2025-06-05 00:31:44] 2025-06-04 22:31:22,108 | INFO     | preparing for final server update for job 6680028435 in state='finished'
[2025-06-05 00:31:44] 2025-06-04 22:31:22,109 | INFO     | this job has now completed (state=finished)
[2025-06-05 00:31:44] 2025-06-04 22:31:22,109 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 00:31:44] 2025-06-04 22:31:22,109 | INFO     | log transfer has been attempted: DONE
[2025-06-05 00:31:44] 2025-06-04 22:31:22,109 | INFO     | job 6680028435 has finished - writing final server update
[2025-06-05 00:31:44] 2025-06-04 22:31:22,109 | INFO     | total number of processed events: 400 (read)
[2025-06-05 00:31:44] 2025-06-04 22:31:22,111 | INFO     | executing command: lscpu
[2025-06-05 00:31:44] 2025-06-04 22:31:22,131 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 00:31:44] 2025-06-04 22:31:23,555 | INFO     | monitor loop #290: job 0:6680028435 is in state 'finished'
[2025-06-05 00:31:44] 2025-06-04 22:31:23,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:31:44] 2025-06-04 22:31:24,682 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 00:31:44] 2025-06-04 22:31:24,683 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6680028435/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:31:44] 2025-06-04 22:31:24,683 | INFO     | extracted standard info from prmon json
[2025-06-05 00:31:44] 2025-06-04 22:31:24,684 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:31:44] 2025-06-04 22:31:24,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:31:44] 2025-06-04 22:31:24,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:31:44] 2025-06-04 22:31:24,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:31:44] 2025-06-04 22:31:24,685 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | sum of square deviations: 54438230.0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | sum of deviations: -6615612931.0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | mean x: 1749074462.5
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | mean y: 3016135.3214285714
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | -- intersect: 212559516069.2259
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | intersect: 212559516069.2259
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | chi2: 0.1396066995728496
[2025-06-05 00:31:44] 2025-06-04 22:31:24,686 | INFO     | -- intersect: 212559516069.2259
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | current memory leak: -121.53 B/s (using 56 data points, chi2=0.14)
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | ..............................
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . Timing measurements:
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . get job = 0 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . initial setup = 1 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . payload setup = 5 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . stage-in = 0 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . payload execution = 3798 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,687 | INFO     | . stage-out = 0 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,688 | INFO     | . log creation = 0 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,688 | INFO     | ..............................
[2025-06-05 00:31:44] 2025-06-04 22:31:24,758 | INFO     | 
[2025-06-05 00:31:44] 2025-06-04 22:31:24,758 | INFO     | job summary report
[2025-06-05 00:31:44] 2025-06-04 22:31:24,758 | INFO     | --------------------------------------------------
[2025-06-05 00:31:44] 2025-06-04 22:31:24,758 | INFO     | PanDA job id: 6680028435
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | task id: 45006595
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | errors: (none)
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | pilot state: finished 
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | transexitcode: 0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | exeerrorcode: 0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | exeerrordiag: 
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | exitcode: 0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | exitmsg: OK
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | cpuconsumptiontime: 40095 s
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | nevents: 400
[2025-06-05 00:31:44] 2025-06-04 22:31:24,759 | INFO     | neventsw: 0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | pid: 672006
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | pgrp: 672006
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | corecount: 12
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | event service: False
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | sizes: {0: 2397121, 1: 2397320, 3: 2397526, 11: 2397554, 3807: 2423283, 3809: 2432224, 3811: 2432408, 3813: 2432578}
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | --------------------------------------------------
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | 
[2025-06-05 00:31:44] 2025-06-04 22:31:24,760 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,780 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:31:44] 2025-06-04 22:31:24,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:31:44] 2025-06-04 22:31:24,782 | INFO     | job 6680028435 has completed (purged errors)
[2025-06-05 00:31:44] 2025-06-04 22:31:24,782 | INFO     | overall cleanup function is called
[2025-06-05 00:31:44] 2025-06-04 22:31:25,787 | INFO     | --- collectZombieJob: --- 10, [672006]
[2025-06-05 00:31:44] 2025-06-04 22:31:25,787 | INFO     | zombie collector waiting for pid 672006
[2025-06-05 00:31:44] 2025-06-04 22:31:25,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:31:44] 2025-06-04 22:31:25,787 | INFO     | collected zombie processes
[2025-06-05 00:31:44] 2025-06-04 22:31:25,787 | INFO     | will attempt to kill all subprocesses of pid=672006
[2025-06-05 00:31:44] 2025-06-04 22:31:25,861 | INFO     | process IDs to be killed: [672006] (in reverse order)
[2025-06-05 00:31:44] 2025-06-04 22:31:25,893 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:31:44] 2025-06-04 22:31:25,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:31:44] 2025-06-04 22:31:25,896 | INFO     | did not find any defunct processes belonging to 672006
[2025-06-05 00:31:44] 2025-06-04 22:31:25,898 | INFO     | did not find any defunct processes belonging to 672006
[2025-06-05 00:31:44] 2025-06-04 22:31:25,898 | INFO     | ready for new job
[2025-06-05 00:31:44] 2025-06-04 22:31:25,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:31:44] 2025-06-04 22:31:25,899 | INFO     | **************************************
[2025-06-05 00:31:44] 2025-06-04 22:31:25,899 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:31:44] 2025-06-04 22:31:25,900 | INFO     | **************************************
[2025-06-05 00:31:44] 2025-06-04 22:31:25,900 | INFO     | 
[2025-06-05 00:31:44] 2025-06-04 22:31:25,900 | INFO     | architecture information:
[2025-06-05 00:31:44] 2025-06-04 22:31:25,900 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:31:44] 2025-06-04 22:31:25,908 | INFO     | cat /etc/os-release:
[2025-06-05 00:31:44] NAME="CentOS Linux"
[2025-06-05 00:31:44] VERSION="7 (Core)"
[2025-06-05 00:31:44] ID="centos"
[2025-06-05 00:31:44] ID_LIKE="rhel fedora"
[2025-06-05 00:31:44] VERSION_ID="7"
[2025-06-05 00:31:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:31:44] ANSI_COLOR="0;31"
[2025-06-05 00:31:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:31:44] HOME_URL="https://www.centos.org/"
[2025-06-05 00:31:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:31:44] 
[2025-06-05 00:31:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:31:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:31:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:31:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:31:44] 
[2025-06-05 00:31:44] 2025-06-04 22:31:25,909 | INFO     | **************************************
[2025-06-05 00:31:44] 2025-06-04 22:31:26,412 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-05 00:31:44] 2025-06-04 22:31:26,423 | INFO     | sufficient remaining disk space (1815919722496 B)
[2025-06-05 00:31:44] 2025-06-04 22:31:26,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:31:44] 2025-06-04 22:31:26,424 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:31:44] 2025-06-04 22:31:26,424 | INFO     | update_server=False
[2025-06-05 00:31:44] 2025-06-04 22:31:26,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:31:44] 2025-06-04 22:31:26,424 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:31:44] 2025-06-04 22:31:26,477 | INFO     | all payload control threads have been joined
[2025-06-05 00:31:44] 2025-06-04 22:31:27,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:31:44] 2025-06-04 22:31:27,063 | INFO     | aborting loop
[2025-06-05 00:31:44] 2025-06-04 22:31:27,374 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:31:44] 2025-06-04 22:31:27,374 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:31:44] 2025-06-04 22:31:27,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:31:44] 2025-06-04 22:31:27,429 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:27,430 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:27,458 | INFO     | all data control threads have been joined
[2025-06-05 00:31:44] 2025-06-04 22:31:27,482 | INFO     | [payload] control thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:27,825 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:27,877 | INFO     | all job control threads have been joined
[2025-06-05 00:31:44] 2025-06-04 22:31:27,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:31:44] 2025-06-04 22:31:28,069 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:31:44] 2025-06-04 22:31:28,463 | INFO     | [data] control thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,655 | INFO     | [job] validate thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,736 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,768 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,817 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,824 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,882 | INFO     | [job] control thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:28,922 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:29,889 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:32,119 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:36,529 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:31:44] 2025-06-04 22:31:37,534 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:31:44] 2025-06-04 22:31:39,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864116950848)>', '<ExcThread(monitor, started 139863059855104)>']
[2025-06-05 00:31:44] 2025-06-04 22:31:39,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:31:44] 2025-06-04 22:31:39,436 | INFO     | [monitor] control thread has ended
[2025-06-05 00:31:44] 2025-06-04 22:31:44,266 | INFO     | all workflow threads have been joined
[2025-06-05 00:31:44] 2025-06-04 22:31:44,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:31:44] 2025-06-04 22:31:44,266 | INFO     | traces error code: 0
[2025-06-05 00:31:44] 2025-06-04 22:31:44,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:31:44] 2025-06-04 22:31:44,343 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:31:44] 2025-06-04 22:31:44,346 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:31:44] 2025-06-04 22:31:44,348 [wrapper] pilotpid: 664861
[2025-06-05 00:31:44] 2025-06-04 22:31:44,351 [wrapper] Pilot exit status: 0
[2025-06-05 00:31:44] 2025-06-04 22:31:44,359 [wrapper] pandaids: 6680028435
[2025-06-05 00:31:44] 2025-06-04 22:31:44,377 [wrapper] cleanup supervisor_pilot  688849 664862
[2025-06-05 00:31:44] 2025-06-04 22:31:44,378 [wrapper] Test setup, not cleaning
[2025-06-05 00:31:44] 2025-06-04 22:31:44,380 [wrapper] apfmon messages muted
[2025-06-05 00:31:44] 2025-06-04 22:31:44,382 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:31:44] 2025-06-04 22:31:44,383 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:31:44]  *** Error codes and diagnostics ***
[2025-06-05 00:31:44]     "exeErrorCode": 0,
[2025-06-05 00:31:44]     "exeErrorDiag": "",
[2025-06-05 00:31:44]     "pilotErrorCode": 0,
[2025-06-05 00:31:44]     "pilotErrorDiag": "",
[2025-06-05 00:31:44]  *** Listing of results directory ***
[2025-06-05 00:31:44] total 393756
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc    495897 Jun  4 21:30 pilot3.tar.gz
[2025-06-05 00:31:44] -rwx------ 1 boinc boinc     37140 Jun  4 22:22 runpilot2-wrapper.sh
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc      5111 Jun  4 22:22 queuedata.json
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc       100 Jun  4 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:31:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 23:27 run_atlas
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc       105 Jun  4 23:27 job.xml
[2025-06-05 00:31:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:27 start_atlas.sh
[2025-06-05 00:31:44] drwxrwx--x 2 boinc boinc        68 Jun  4 23:27 shared
[2025-06-05 00:31:44] -rw-r--r-- 2 boinc boinc    508886 Jun  4 23:27 input.tar.gz
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc      6254 Jun  4 23:27 init_data.xml
[2025-06-05 00:31:44] -rw-r--r-- 2 boinc boinc 213917692 Jun  4 23:27 EVNT.45006593._002059.pool.root.1
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc         0 Jun  4 23:27 boinc_lockfile
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc      2525 Jun  4 23:27 pandaJob.out
[2025-06-05 00:31:44] -rw------- 1 boinc boinc    987032 Jun  4 23:27 agis_schedconf.cvmfs.json
[2025-06-05 00:31:44] -rw------- 1 boinc boinc   1598969 Jun  4 23:27 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:31:44] drwx------ 4 boinc boinc      4096 Jun  4 23:27 pilot3
[2025-06-05 00:31:44] -rw------- 1 boinc boinc 183996173 Jun  5 00:30 HITS.45006595._056903.pool.root.1
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc       529 Jun  5 00:30 boinc_task_state.xml
[2025-06-05 00:31:44] -rw------- 1 boinc boinc      1014 Jun  5 00:31 memory_monitor_summary.json
[2025-06-05 00:31:44] -rw------- 1 boinc boinc    362679 Jun  5 00:31 log.45006595._056903.job.log.tgz.1
[2025-06-05 00:31:44] -rw------- 1 boinc boinc        95 Jun  5 00:31 pilot_heartbeat.json
[2025-06-05 00:31:44] -rw------- 1 boinc boinc      7688 Jun  5 00:31 heartbeat.json
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc      8192 Jun  5 00:31 boinc_mmap_file
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc        27 Jun  5 00:31 wrapper_checkpoint.txt
[2025-06-05 00:31:44] -rw------- 1 boinc boinc      4427 Jun  5 00:31 pilotlog.txt
[2025-06-05 00:31:44] -rw------- 1 boinc boinc    376884 Jun  5 00:31 log.45006595._056903.job.log.1
[2025-06-05 00:31:44] -rw------- 1 boinc boinc       357 Jun  5 00:31 output.list
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc       620 Jun  5 00:31 runtime_log
[2025-06-05 00:31:44] -rw------- 1 boinc boinc    757760 Jun  5 00:31 result.tar.gz
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc      8683 Jun  5 00:31 runtime_log.err
[2025-06-05 00:31:44] -rw------- 1 boinc boinc       654 Jun  5 00:31 JftKDmco9g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf2nKDmucNadn.diag
[2025-06-05 00:31:44] -rw-r--r-- 1 boinc boinc     21187 Jun  5 00:31 stderr.txt
[2025-06-05 00:31:44] HITS file was successfully produced:
[2025-06-05 00:31:44] -rw------- 1 boinc boinc 183996173 Jun  5 00:30 shared/HITS.pool.root.1
[2025-06-05 00:31:44]  *** Contents of shared directory: ***
[2025-06-05 00:31:44] total 389844
[2025-06-05 00:31:44] -rw-r--r-- 2 boinc boinc     15093 Jun  4 23:27 start_atlas.sh
[2025-06-05 00:31:44] -rw-r--r-- 2 boinc boinc    508886 Jun  4 23:27 input.tar.gz
[2025-06-05 00:31:44] -rw-r--r-- 2 boinc boinc 213917692 Jun  4 23:27 ATLAS.root_0
[2025-06-05 00:31:44] -rw------- 1 boinc boinc 183996173 Jun  5 00:30 HITS.pool.root.1
[2025-06-05 00:31:44] -rw------- 1 boinc boinc    757760 Jun  5 00:31 result.tar.gz
00:31:45 (661182): run_atlas exited; CPU time 40113.334946
00:31:45 (661182): called boinc_finish(0)

</stderr_txt>
]]>

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