Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:31:48 (693906): wrapper (7.7.26015): starting
00:31:48 (693906): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 00:31:48] Arguments: --nthreads 12
[2025-06-05 00:31:48] Threads: 12
[2025-06-05 00:31:48] Checking for CVMFS
[2025-06-05 00:31:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:31:48] 2.12.7.0 628303 127 56980 146797 1 55 3652104 4097025 0 130560 0 142794 99.987 74014 10085 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-05 00:31:48] CVMFS is ok
[2025-06-05 00:31:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:31:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:31:48] Further information can be found at the LHC@home message board.
[2025-06-05 00:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:31:48] Checking for apptainer binary...
[2025-06-05 00:31:48] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-05 00:31:48] apptainer is not installed, using version from CVMFS
[2025-06-05 00:31:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:31:48] pckelar5.cern.ch
[2025-06-05 00:31:48] apptainer works
[2025-06-05 00:31:48] Set ATHENA_PROC_NUMBER=12
[2025-06-05 00:31:48] Set ATHENA_CORE_NUMBER=12
[2025-06-05 00:31:48] Starting ATLAS job with PandaID=6680028432
[2025-06-05 00:31:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:33:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:33:45]  guid=c15d6d3b-be67-4d12-8f10-b81545000fcb
[2025-06-05 01:33:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-05 01:33:45]  is_altstaged=None
[2025-06-05 01:33:45]  is_tar=False
[2025-06-05 01:33:45]  lfn=log.45006595._056900.job.log.tgz.1
[2025-06-05 01:33:45]  mtime=0
[2025-06-05 01:33:45]  protocol_id=None
[2025-06-05 01:33:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-05 01:33:45]  replicas=None
[2025-06-05 01:33:45]  scope=mc23_13p6TeV
[2025-06-05 01:33:45]  status=None
[2025-06-05 01:33:45]  status_code=0
[2025-06-05 01:33:45]  storage_token=
[2025-06-05 01:33:45]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6680028432/log.45006595._056900.job.log.tgz.1
[2025-06-05 01:33:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/cc/log.45006595._056900.job.log.tgz.1
[2025-06-05 01:33:45]  workdir=None
[2025-06-05 01:33:45] ]
[2025-06-05 01:33:45] 2025-06-04 23:33:17,768 | INFO     | transferring file log.45006595._056900.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6680028432/log.45006595._056900.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 01:33:45] 2025-06-04 23:33:17,768 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6680028432/log.45006595._056900.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._056900.job
[2025-06-05 01:33:45] 2025-06-04 23:33:17,785 | INFO     | adding to output.list: log.45006595._056900.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/cc/log.45006595._056900.job.log.tg
[2025-06-05 01:33:45] 2025-06-04 23:33:17,785 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 01:33:45] 2025-06-04 23:33:17,785 | INFO     | summary of transferred files:
[2025-06-05 01:33:45] 2025-06-04 23:33:17,786 | INFO     |  -- lfn=log.45006595._056900.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 01:33:45] 2025-06-04 23:33:17,786 | INFO     | stage-out finished correctly
[2025-06-05 01:33:45] 2025-06-04 23:33:18,387 | INFO     | monitor loop #277: job 0:6680028432 is in state 'finished'
[2025-06-05 01:33:45] 2025-06-04 23:33:18,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:33:45] 2025-06-04 23:33:20,470 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 01:33:45] 2025-06-04 23:33:20,890 | INFO     | monitor loop #278: job 0:6680028432 is in state 'finished'
[2025-06-05 01:33:45] 2025-06-04 23:33:20,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:33:45] 2025-06-04 23:33:22,587 | INFO     | job 6680028432 has state=finished
[2025-06-05 01:33:45] 2025-06-04 23:33:22,588 | INFO     | preparing for final server update for job 6680028432 in state='finished'
[2025-06-05 01:33:45] 2025-06-04 23:33:22,588 | INFO     | this job has now completed (state=finished)
[2025-06-05 01:33:45] 2025-06-04 23:33:22,588 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 01:33:45] 2025-06-04 23:33:22,588 | INFO     | log transfer has been attempted: DONE
[2025-06-05 01:33:45] 2025-06-04 23:33:22,588 | INFO     | job 6680028432 has finished - writing final server update
[2025-06-05 01:33:45] 2025-06-04 23:33:22,589 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:33:45] 2025-06-04 23:33:22,589 | INFO     | executing command: lscpu
[2025-06-05 01:33:45] 2025-06-04 23:33:22,610 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:33:45] 2025-06-04 23:33:23,393 | INFO     | monitor loop #279: job 0:6680028432 is in state 'finished'
[2025-06-05 01:33:45] 2025-06-04 23:33:23,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:33:45] 2025-06-04 23:33:25,192 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 01:33:45] 2025-06-04 23:33:25,193 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6680028432/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:33:45] 2025-06-04 23:33:25,194 | INFO     | extracted standard info from prmon json
[2025-06-05 01:33:45] 2025-06-04 23:33:25,194 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:33:45] 2025-06-04 23:33:25,194 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:33:45] 2025-06-04 23:33:25,194 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:33:45] 2025-06-04 23:33:25,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:33:45] 2025-06-04 23:33:25,196 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:33:45] 2025-06-04 23:33:25,196 | INFO     | sum of square deviations: 46147842.0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,196 | INFO     | sum of deviations: -6866329457.999999
[2025-06-05 01:33:45] 2025-06-04 23:33:25,196 | INFO     | mean x: 1749078228.0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,196 | INFO     | mean y: 2999322.2264150945
[2025-06-05 01:33:45] 2025-06-04 23:33:25,196 | INFO     | -- intersect: 260248047427.896
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | intersect: 260248047427.896
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | chi2: 0.08555636705158871
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | -- intersect: 260248047427.896
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | current memory leak: -148.79 B/s (using 53 data points, chi2=0.09)
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | ..............................
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | . Timing measurements:
[2025-06-05 01:33:45] 2025-06-04 23:33:25,197 | INFO     | . get job = 0 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | . initial setup = 1 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | . payload setup = 5 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | . stage-in = 0 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | . payload execution = 3658 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | . stage-out = 0 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | . log creation = 0 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,198 | INFO     | ..............................
[2025-06-05 01:33:45] 2025-06-04 23:33:25,730 | INFO     | 
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | job summary report
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | --------------------------------------------------
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | PanDA job id: 6680028432
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | task id: 45006595
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | errors: (none)
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | pilot state: finished 
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | transexitcode: 0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | exeerrorcode: 0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | exeerrordiag: 
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | exitcode: 0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,731 | INFO     | exitmsg: OK
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | cpuconsumptiontime: 39747 s
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | nevents: 400
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | neventsw: 0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | pid: 704772
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | pgrp: 704772
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | corecount: 12
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | event service: False
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | sizes: {0: 2397178, 1: 2397320, 3: 2397526, 11: 2397554, 3667: 2423228, 3668: 2423227, 3669: 2432352, 3671: 2432408, 3676: 2432578}
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | --------------------------------------------------
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | 
[2025-06-05 01:33:45] 2025-06-04 23:33:25,732 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-05 01:33:45] 2025-06-04 23:33:25,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,750 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,750 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,750 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,751 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:33:45] 2025-06-04 23:33:25,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:33:45] 2025-06-04 23:33:25,752 | INFO     | job 6680028432 has completed (purged errors)
[2025-06-05 01:33:45] 2025-06-04 23:33:25,752 | INFO     | overall cleanup function is called
[2025-06-05 01:33:45] 2025-06-04 23:33:26,759 | INFO     | --- collectZombieJob: --- 10, [704772]
[2025-06-05 01:33:45] 2025-06-04 23:33:26,759 | INFO     | zombie collector waiting for pid 704772
[2025-06-05 01:33:45] 2025-06-04 23:33:26,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:33:45] 2025-06-04 23:33:26,759 | INFO     | collected zombie processes
[2025-06-05 01:33:45] 2025-06-04 23:33:26,759 | INFO     | will attempt to kill all subprocesses of pid=704772
[2025-06-05 01:33:45] 2025-06-04 23:33:26,836 | INFO     | process IDs to be killed: [704772] (in reverse order)
[2025-06-05 01:33:45] 2025-06-04 23:33:26,873 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:33:45] 2025-06-04 23:33:26,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:33:45] 2025-06-04 23:33:26,875 | INFO     | did not find any defunct processes belonging to 704772
[2025-06-05 01:33:45] 2025-06-04 23:33:26,877 | INFO     | did not find any defunct processes belonging to 704772
[2025-06-05 01:33:45] 2025-06-04 23:33:26,877 | INFO     | ready for new job
[2025-06-05 01:33:45] 2025-06-04 23:33:26,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:33:45] 2025-06-04 23:33:26,879 | INFO     | **************************************
[2025-06-05 01:33:45] 2025-06-04 23:33:26,879 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:33:45] 2025-06-04 23:33:26,879 | INFO     | **************************************
[2025-06-05 01:33:45] 2025-06-04 23:33:26,879 | INFO     | 
[2025-06-05 01:33:45] 2025-06-04 23:33:26,879 | INFO     | architecture information:
[2025-06-05 01:33:45] 2025-06-04 23:33:26,880 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:33:45] 2025-06-04 23:33:26,890 | INFO     | cat /etc/os-release:
[2025-06-05 01:33:45] NAME="CentOS Linux"
[2025-06-05 01:33:45] VERSION="7 (Core)"
[2025-06-05 01:33:45] ID="centos"
[2025-06-05 01:33:45] ID_LIKE="rhel fedora"
[2025-06-05 01:33:45] VERSION_ID="7"
[2025-06-05 01:33:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:33:45] ANSI_COLOR="0;31"
[2025-06-05 01:33:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:33:45] HOME_URL="https://www.centos.org/"
[2025-06-05 01:33:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:33:45] 
[2025-06-05 01:33:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:33:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:33:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:33:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:33:45] 
[2025-06-05 01:33:45] 2025-06-04 23:33:26,890 | INFO     | **************************************
[2025-06-05 01:33:45] 2025-06-04 23:33:27,393 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-05 01:33:45] 2025-06-04 23:33:27,406 | INFO     | sufficient remaining disk space (1816102174720 B)
[2025-06-05 01:33:45] 2025-06-04 23:33:27,407 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:33:45] 2025-06-04 23:33:27,407 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:33:45] 2025-06-04 23:33:27,407 | INFO     | update_server=False
[2025-06-05 01:33:45] 2025-06-04 23:33:27,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:33:45] 2025-06-04 23:33:27,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:33:45] 2025-06-04 23:33:27,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:33:45] 2025-06-04 23:33:27,408 | INFO     | aborting loop
[2025-06-05 01:33:45] 2025-06-04 23:33:27,577 | INFO     | all job control threads have been joined
[2025-06-05 01:33:45] 2025-06-04 23:33:28,096 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:33:45] 2025-06-04 23:33:28,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:33:45] 2025-06-04 23:33:28,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:33:45] 2025-06-04 23:33:28,148 | INFO     | all data control threads have been joined
[2025-06-05 01:33:45] 2025-06-04 23:33:28,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:33:45] 2025-06-04 23:33:28,409 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,412 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,509 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,582 | INFO     | [job] control thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,657 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,756 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,797 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:28,896 | INFO     | all payload control threads have been joined
[2025-06-05 01:33:45] 2025-06-04 23:33:29,153 | INFO     | [data] control thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:29,452 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:29,613 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:29,859 | INFO     | [job] validate thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:29,901 | INFO     | [payload] control thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:30,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:33:45] 2025-06-04 23:33:30,372 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:31,282 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:31,413 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:38,193 | INFO     | job.realtimelogging is not enabled
[2025-06-05 01:33:45] 2025-06-04 23:33:39,198 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:33:45] 2025-06-04 23:33:39,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140694757238592)>', '<ExcThread(monitor, started 140693850806016)>']
[2025-06-05 01:33:45] 2025-06-04 23:33:40,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:33:45] 2025-06-04 23:33:40,149 | INFO     | [monitor] control thread has ended
[2025-06-05 01:33:45] 2025-06-04 23:33:44,874 | INFO     | all workflow threads have been joined
[2025-06-05 01:33:45] 2025-06-04 23:33:44,874 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:33:45] 2025-06-04 23:33:44,874 | INFO     | traces error code: 0
[2025-06-05 01:33:45] 2025-06-04 23:33:44,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:33:45] 2025-06-04 23:33:44,947 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:33:45] 2025-06-04 23:33:44,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:33:45] 2025-06-04 23:33:44,952 [wrapper] pilotpid: 697602
[2025-06-05 01:33:45] 2025-06-04 23:33:44,954 [wrapper] Pilot exit status: 0
[2025-06-05 01:33:45] 2025-06-04 23:33:44,962 [wrapper] pandaids: 6680028432
[2025-06-05 01:33:45] 2025-06-04 23:33:44,984 [wrapper] cleanup supervisor_pilot  720806 697603
[2025-06-05 01:33:45] 2025-06-04 23:33:44,986 [wrapper] Test setup, not cleaning
[2025-06-05 01:33:45] 2025-06-04 23:33:44,988 [wrapper] apfmon messages muted
[2025-06-05 01:33:45] 2025-06-04 23:33:44,990 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:33:45] 2025-06-04 23:33:44,992 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:33:45]  *** Error codes and diagnostics ***
[2025-06-05 01:33:45]     "exeErrorCode": 0,
[2025-06-05 01:33:45]     "exeErrorDiag": "",
[2025-06-05 01:33:45]     "pilotErrorCode": 0,
[2025-06-05 01:33:45]     "pilotErrorDiag": "",
[2025-06-05 01:33:45]  *** Listing of results directory ***
[2025-06-05 01:33:45] total 389512
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc    495897 Jun  4 21:30 pilot3.tar.gz
[2025-06-05 01:33:45] -rwx------ 1 boinc boinc     37140 Jun  4 22:22 runpilot2-wrapper.sh
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc      5111 Jun  4 22:22 queuedata.json
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:33:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:31 run_atlas
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:31 job.xml
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc      6254 Jun  5 00:31 init_data.xml
[2025-06-05 01:33:45] -rw-r--r-- 2 boinc boinc 213440236 Jun  5 00:31 EVNT.45006593._001926.pool.root.1
[2025-06-05 01:33:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:31 start_atlas.sh
[2025-06-05 01:33:45] drwxrwx--x 2 boinc boinc        68 Jun  5 00:31 shared
[2025-06-05 01:33:45] -rw-r--r-- 2 boinc boinc    508884 Jun  5 00:31 input.tar.gz
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:31 boinc_lockfile
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc      2525 Jun  5 00:31 pandaJob.out
[2025-06-05 01:33:45] -rw------- 1 boinc boinc    987032 Jun  5 00:31 agis_schedconf.cvmfs.json
[2025-06-05 01:33:45] -rw------- 1 boinc boinc   1598969 Jun  5 00:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:33:45] drwx------ 4 boinc boinc      4096 Jun  5 00:31 pilot3
[2025-06-05 01:33:45] -rw------- 1 boinc boinc        95 Jun  5 01:32 pilot_heartbeat.json
[2025-06-05 01:33:45] -rw------- 1 boinc boinc 180166322 Jun  5 01:32 HITS.45006595._056900.pool.root.1
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc       530 Jun  5 01:32 boinc_task_state.xml
[2025-06-05 01:33:45] -rw------- 1 boinc boinc      1014 Jun  5 01:33 memory_monitor_summary.json
[2025-06-05 01:33:45] -rw------- 1 boinc boinc    357076 Jun  5 01:33 log.45006595._056900.job.log.tgz.1
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc        27 Jun  5 01:33 wrapper_checkpoint.txt
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:33 boinc_mmap_file
[2025-06-05 01:33:45] -rw------- 1 boinc boinc      7690 Jun  5 01:33 heartbeat.json
[2025-06-05 01:33:45] -rw------- 1 boinc boinc      4427 Jun  5 01:33 pilotlog.txt
[2025-06-05 01:33:45] -rw------- 1 boinc boinc    363814 Jun  5 01:33 log.45006595._056900.job.log.1
[2025-06-05 01:33:45] -rw------- 1 boinc boinc       357 Jun  5 01:33 output.list
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:33 runtime_log
[2025-06-05 01:33:45] -rw------- 1 boinc boinc    737280 Jun  5 01:33 result.tar.gz
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc      8683 Jun  5 01:33 runtime_log.err
[2025-06-05 01:33:45] -rw------- 1 boinc boinc       654 Jun  5 01:33 1spKDmco9g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc2nKDmZ552Lm.diag
[2025-06-05 01:33:45] -rw-r--r-- 1 boinc boinc     21389 Jun  5 01:33 stderr.txt
[2025-06-05 01:33:45] HITS file was successfully produced:
[2025-06-05 01:33:45] -rw------- 1 boinc boinc 180166322 Jun  5 01:32 shared/HITS.pool.root.1
[2025-06-05 01:33:45]  *** Contents of shared directory: ***
[2025-06-05 01:33:45] total 385620
[2025-06-05 01:33:45] -rw-r--r-- 2 boinc boinc 213440236 Jun  5 00:31 ATLAS.root_0
[2025-06-05 01:33:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:31 start_atlas.sh
[2025-06-05 01:33:45] -rw-r--r-- 2 boinc boinc    508884 Jun  5 00:31 input.tar.gz
[2025-06-05 01:33:45] -rw------- 1 boinc boinc 180166322 Jun  5 01:32 HITS.pool.root.1
[2025-06-05 01:33:45] -rw------- 1 boinc boinc    737280 Jun  5 01:33 result.tar.gz
01:33:46 (693906): run_atlas exited; CPU time 39762.888467
01:33:46 (693906): called boinc_finish(0)

</stderr_txt>
]]>

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