Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:19:06 (2406206): wrapper (7.7.26015): starting
16:19:06 (2406206): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:19:06] Arguments: --nthreads 8
[2025-06-04 16:19:06] Threads: 8
[2025-06-04 16:19:06] Checking for CVMFS
[2025-06-04 16:19:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:19:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:19:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:19:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:19:07] 2.12.6.0 383503 23980 627072 146793 2 362 27306300 32935936 27102 16776704 0 229229065 99.693 182060421 22503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 16:19:07] CVMFS is ok
[2025-06-04 16:19:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:19:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:19:07] Further information can be found at the LHC@home message board.
[2025-06-04 16:19:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:19:07] Checking for apptainer binary...
[2025-06-04 16:19:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:19:07] Running /usr/bin/apptainer --version
[2025-06-04 16:19:07] apptainer version 1.4.1-1.el9
[2025-06-04 16:19:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:19:07] c7-2-14.aglt2.org
[2025-06-04 16:19:07] apptainer works
[2025-06-04 16:19:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:19:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:19:07] Starting ATLAS job with PandaID=6667101446
[2025-06-04 16:19:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:44:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:44:21] 2025-06-04 23:44:00,405 | INFO     | .. there are 27 such processes running
[2025-06-04 19:44:21] 2025-06-04 23:44:01,352 | INFO     | monitor loop #811: job 0:6667101446 is in state 'finished'
[2025-06-04 19:44:21] 2025-06-04 23:44:01,352 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:44:21] 2025-06-04 23:44:03,857 | INFO     | monitor loop #812: job 0:6667101446 is in state 'finished'
[2025-06-04 19:44:21] 2025-06-04 23:44:03,857 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:44:21] 2025-06-04 23:44:06,373 | INFO     | monitor loop #813: job 0:6667101446 is in state 'finished'
[2025-06-04 19:44:21] 2025-06-04 23:44:06,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,081 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 19:44:21] 2025-06-04 23:44:07,084 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667101446/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,085 | INFO     | extracted standard info from prmon json
[2025-06-04 19:44:21] 2025-06-04 23:44:07,085 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:44:21] 2025-06-04 23:44:07,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:44:21] 2025-06-04 23:44:07,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:44:21] 2025-06-04 23:44:07,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:44:21] 2025-06-04 23:44:07,092 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:44:21] 2025-06-04 23:44:07,092 | INFO     | sum of square deviations: 2517993624.995033
[2025-06-04 19:44:21] 2025-06-04 23:44:07,093 | INFO     | sum of deviations: -28568246722.975136
[2025-06-04 19:44:21] 2025-06-04 23:44:07,093 | INFO     | mean x: 1749074525.004975
[2025-06-04 19:44:21] 2025-06-04 23:44:07,093 | INFO     | mean y: 2267460.975124378
[2025-06-04 19:44:21] 2025-06-04 23:44:07,093 | INFO     | -- intersect: 19846635640.14843
[2025-06-04 19:44:21] 2025-06-04 23:44:07,093 | INFO     | intersect: 19846635640.14843
[2025-06-04 19:44:21] 2025-06-04 23:44:07,094 | INFO     | chi2: 2.6424381922236573
[2025-06-04 19:44:21] 2025-06-04 23:44:07,094 | INFO     | sum of square deviations: 2334716074.9948916
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | sum of deviations: -15009261806.94898
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | mean x: 1749074372.5051022
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | mean y: 2278547.948979592
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | -- intersect: 11246607337.183672
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | intersect: 11246607337.183672
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | chi2: 1.992597240092761
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | current chi2=1.992597240092761 (change=24.592475012028338 %)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,095 | INFO     | right removable region: 195
[2025-06-04 19:44:21] 2025-06-04 23:44:07,096 | INFO     | sum of square deviations: 2334715464.9948916
[2025-06-04 19:44:21] 2025-06-04 23:44:07,096 | INFO     | sum of deviations: -59095684159.56633
[2025-06-04 19:44:21] 2025-06-04 23:44:07,096 | INFO     | mean x: 1749074677.5051022
[2025-06-04 19:44:21] 2025-06-04 23:44:07,097 | INFO     | mean y: 2292626.0663265307
[2025-06-04 19:44:21] 2025-06-04 23:44:07,097 | INFO     | -- intersect: 44274396127.79347
[2025-06-04 19:44:21] 2025-06-04 23:44:07,097 | INFO     | intersect: 44274396127.79347
[2025-06-04 19:44:21] 2025-06-04 23:44:07,097 | INFO     | chi2: 1.0628690283427455
[2025-06-04 19:44:21] 2025-06-04 23:44:07,097 | INFO     | current chi2=1.0628690283427455 (change=59.77695783119442 %)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,097 | INFO     | sum of square deviations: 2160553754.9947653
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | sum of deviations: -57445813183.20941
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | mean x: 1749074830.0052357
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | mean y: 2291181.2094240836
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | -- intersect: 46507510362.01058
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | intersect: 46507510362.01058
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | chi2: 1.05693716310485
[2025-06-04 19:44:21] 2025-06-04 23:44:07,098 | INFO     | current chi2=1.05693716310485 (change=0.5580993593485915 %)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,099 | INFO     | left removable region: 20
[2025-06-04 19:44:21] 2025-06-04 23:44:07,099 | INFO     | sum of square deviations: 1661790670.9942875
[2025-06-04 19:44:21] 2025-06-04 23:44:07,099 | INFO     | sum of deviations: -34933064884.75429
[2025-06-04 19:44:21] 2025-06-04 23:44:07,100 | INFO     | mean x: 1749074952.0057142
[2025-06-04 19:44:21] 2025-06-04 23:44:07,100 | INFO     | mean y: 2294504.754285714
[2025-06-04 19:44:21] 2025-06-04 23:44:07,100 | INFO     | -- intersect: 36770191841.76138
[2025-06-04 19:44:21] 2025-06-04 23:44:07,100 | INFO     | intersect: 36770191841.76138
[2025-06-04 19:44:21] 2025-06-04 23:44:07,103 | INFO     | chi2: 0.3710238723123461
[2025-06-04 19:44:21] 2025-06-04 23:44:07,103 | INFO     | -- intersect: 36770191841.76138
[2025-06-04 19:44:21] 2025-06-04 23:44:07,103 | INFO     | current memory leak: -21.02 B/s (using 175 data points, chi2=0.37)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | ..............................
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . Timing measurements:
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . get job = 0 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . initial setup = 3 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . payload setup = 14 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . stage-in = 0 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . payload execution = 12216 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . stage-out = 2 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | . log creation = 0 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,104 | INFO     | ..............................
[2025-06-04 19:44:21] 2025-06-04 23:44:07,191 | INFO     | 
[2025-06-04 19:44:21] 2025-06-04 23:44:07,191 | INFO     | job summary report
[2025-06-04 19:44:21] 2025-06-04 23:44:07,191 | INFO     | --------------------------------------------------
[2025-06-04 19:44:21] 2025-06-04 23:44:07,191 | INFO     | PanDA job id: 6667101446
[2025-06-04 19:44:21] 2025-06-04 23:44:07,191 | INFO     | task id: 44871837
[2025-06-04 19:44:21] 2025-06-04 23:44:07,191 | INFO     | errors: (none)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | pilot state: finished 
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | transexitcode: 0
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | exeerrorcode: 0
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | exeerrordiag: 
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | exitcode: 0
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | exitmsg: OK
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | cpuconsumptiontime: 39711 s
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | nevents: 400
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | neventsw: 0
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | pid: 2418776
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | pgrp: 2418776
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | corecount: 8
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | event service: False
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | sizes: {0: 2397221, 1: 2397420, 12: 2397654, 22: 2397654, 12234: 2427137, 12235: 2427136, 12238: 2436317, 12245: 2436431}
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | --------------------------------------------------
[2025-06-04 19:44:21] 2025-06-04 23:44:07,192 | INFO     | 
[2025-06-04 19:44:21] 2025-06-04 23:44:07,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:44:21] 2025-06-04 23:44:07,347 | INFO     | job 6667101446 has completed (purged errors)
[2025-06-04 19:44:21] 2025-06-04 23:44:07,348 | INFO     | overall cleanup function is called
[2025-06-04 19:44:21] 2025-06-04 23:44:07,427 | INFO     | 12281s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 19:44:21] 2025-06-04 23:44:08,356 | INFO     | --- collectZombieJob: --- 10, [2418776]
[2025-06-04 19:44:21] 2025-06-04 23:44:08,356 | INFO     | zombie collector waiting for pid 2418776
[2025-06-04 19:44:21] 2025-06-04 23:44:08,356 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:44:21] 2025-06-04 23:44:08,356 | INFO     | collected zombie processes
[2025-06-04 19:44:21] 2025-06-04 23:44:08,356 | INFO     | will attempt to kill all subprocesses of pid=2418776
[2025-06-04 19:44:21] 2025-06-04 23:44:08,864 | INFO     | process IDs to be killed: [2418776] (in reverse order)
[2025-06-04 19:44:21] 2025-06-04 23:44:09,008 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:44:21] 2025-06-04 23:44:09,009 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:44:21] 2025-06-04 23:44:09,027 | INFO     | did not find any defunct processes belonging to 2418776
[2025-06-04 19:44:21] 2025-06-04 23:44:09,045 | INFO     | did not find any defunct processes belonging to 2418776
[2025-06-04 19:44:21] 2025-06-04 23:44:09,045 | INFO     | ready for new job
[2025-06-04 19:44:21] 2025-06-04 23:44:09,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:44:21] 2025-06-04 23:44:09,047 | INFO     | **************************************
[2025-06-04 19:44:21] 2025-06-04 23:44:09,047 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:44:21] 2025-06-04 23:44:09,047 | INFO     | **************************************
[2025-06-04 19:44:21] 2025-06-04 23:44:09,047 | INFO     | 
[2025-06-04 19:44:21] 2025-06-04 23:44:09,065 | INFO     | architecture information:
[2025-06-04 19:44:21] 2025-06-04 23:44:09,065 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:44:21] 2025-06-04 23:44:09,082 | INFO     | cat /etc/os-release:
[2025-06-04 19:44:21] NAME="CentOS Linux"
[2025-06-04 19:44:21] VERSION="7 (Core)"
[2025-06-04 19:44:21] ID="centos"
[2025-06-04 19:44:21] ID_LIKE="rhel fedora"
[2025-06-04 19:44:21] VERSION_ID="7"
[2025-06-04 19:44:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:44:21] ANSI_COLOR="0;31"
[2025-06-04 19:44:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:44:21] HOME_URL="https://www.centos.org/"
[2025-06-04 19:44:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:44:21] 
[2025-06-04 19:44:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:44:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:44:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:44:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:44:21] 
[2025-06-04 19:44:21] 2025-06-04 23:44:09,083 | INFO     | **************************************
[2025-06-04 19:44:21] 2025-06-04 23:44:09,586 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 19:44:21] 2025-06-04 23:44:09,660 | INFO     | sufficient remaining disk space (76624691200 B)
[2025-06-04 19:44:21] 2025-06-04 23:44:09,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:44:21] 2025-06-04 23:44:09,661 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:44:21] 2025-06-04 23:44:09,661 | INFO     | update_server=False
[2025-06-04 19:44:21] 2025-06-04 23:44:09,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:44:21] 2025-06-04 23:44:09,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:44:21] 2025-06-04 23:44:09,885 | INFO     | aborting loop
[2025-06-04 19:44:21] 2025-06-04 23:44:10,163 | INFO     | all data control threads have been joined
[2025-06-04 19:44:21] 2025-06-04 23:44:10,286 | INFO     | all payload control threads have been joined
[2025-06-04 19:44:21] 2025-06-04 23:44:10,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:44:21] 2025-06-04 23:44:10,466 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:44:21] 2025-06-04 23:44:10,466 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:44:21] 2025-06-04 23:44:10,466 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:44:21] 2025-06-04 23:44:10,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:44:21] 2025-06-04 23:44:10,667 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:10,703 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:10,710 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:10,716 | INFO     | all job control threads have been joined
[2025-06-04 19:44:21] 2025-06-04 23:44:10,891 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:10,944 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,169 | INFO     | [data] control thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,212 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,292 | INFO     | [payload] control thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,480 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,721 | INFO     | [job] control thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,774 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:11,790 | INFO     | [job] validate thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:12,075 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:12,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:44:21] 2025-06-04 23:44:12,469 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:13,211 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:14,568 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:44:21] 2025-06-04 23:44:15,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459896399680)>', '<ExcThread(monitor, started 140459187894016)>']
[2025-06-04 19:44:21] 2025-06-04 23:44:16,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:44:21] 2025-06-04 23:44:16,501 | INFO     | [monitor] control thread has ended
[2025-06-04 19:44:21] 2025-06-04 23:44:20,778 | INFO     | all workflow threads have been joined
[2025-06-04 19:44:21] 2025-06-04 23:44:20,782 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:44:21] 2025-06-04 23:44:20,782 | INFO     | traces error code: 0
[2025-06-04 19:44:21] 2025-06-04 23:44:20,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:44:21] 2025-06-04 23:44:20,998 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:44:21] 2025-06-04 23:44:21,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:44:21] 2025-06-04 23:44:21,013 [wrapper] pilotpid: 2409798
[2025-06-04 19:44:21] 2025-06-04 23:44:21,028 [wrapper] Pilot exit status: 0
[2025-06-04 19:44:21] 2025-06-04 23:44:21,127 [wrapper] pandaids: 6667101446
[2025-06-04 19:44:21] 2025-06-04 23:44:21,302 [wrapper] cleanup supervisor_pilot 3280963 2409799
[2025-06-04 19:44:21] 2025-06-04 23:44:21,305 [wrapper] Test setup, not cleaning
[2025-06-04 19:44:21] 2025-06-04 23:44:21,308 [wrapper] apfmon messages muted
[2025-06-04 19:44:21] 2025-06-04 23:44:21,311 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:44:21] 2025-06-04 23:44:21,314 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:44:21]  *** Error codes and diagnostics ***
[2025-06-04 19:44:21]     "exeErrorCode": 0,
[2025-06-04 19:44:21]     "exeErrorDiag": "",
[2025-06-04 19:44:21]     "pilotErrorCode": 0,
[2025-06-04 19:44:21]     "pilotErrorDiag": "",
[2025-06-04 19:44:21]  *** Listing of results directory ***
[2025-06-04 19:44:21] total 412380
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas      5111 May 27 09:50 queuedata.json
[2025-06-04 19:44:21] -rwx------. 1 boincer umatlas     37140 May 27 09:52 runpilot2-wrapper.sh
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:44:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 16:19 run_atlas
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 16:19 job.xml
[2025-06-04 19:44:21] -rw-r--r--. 2 boincer umatlas 225061818 Jun  4 16:19 EVNT.44871834._002690.pool.root.1
[2025-06-04 19:44:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:19 start_atlas.sh
[2025-06-04 19:44:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 16:19 shared
[2025-06-04 19:44:21] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 16:19 input.tar.gz
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 16:19 boinc_lockfile
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 16:19 pandaJob.out
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas    987032 Jun  4 16:19 agis_schedconf.cvmfs.json
[2025-06-04 19:44:21] drwx------. 4 boincer umatlas      4096 Jun  4 16:19 pilot3
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas      6935 Jun  4 19:39 init_data.xml
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas 190496903 Jun  4 19:43 HITS.44871837._068406.pool.root.1
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas       531 Jun  4 19:43 boinc_task_state.xml
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas      1046 Jun  4 19:43 memory_monitor_summary.json
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas   1598969 Jun  4 19:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas    377727 Jun  4 19:43 log.44871837._068406.job.log.tgz.1
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas      7701 Jun  4 19:44 heartbeat.json
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas        95 Jun  4 19:44 pilot_heartbeat.json
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 19:44 boinc_mmap_file
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas        28 Jun  4 19:44 wrapper_checkpoint.txt
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas      4353 Jun  4 19:44 pilotlog.txt
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas   1062842 Jun  4 19:44 log.44871837._068406.job.log.1
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas       357 Jun  4 19:44 output.list
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 19:44 runtime_log
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas   1464320 Jun  4 19:44 result.tar.gz
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas      8655 Jun  4 19:44 runtime_log.err
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas       658 Jun  4 19:44 HxoLDmpu9d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaaZKDmAlB3tm.diag
[2025-06-04 19:44:21] -rw-r--r--. 1 boincer umatlas     21146 Jun  4 19:44 stderr.txt
[2025-06-04 19:44:21] HITS file was successfully produced:
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas 190496903 Jun  4 19:43 shared/HITS.pool.root.1
[2025-06-04 19:44:21]  *** Contents of shared directory: ***
[2025-06-04 19:44:21] total 407776
[2025-06-04 19:44:21] -rw-r--r--. 2 boincer umatlas 225061818 Jun  4 16:19 ATLAS.root_0
[2025-06-04 19:44:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:19 start_atlas.sh
[2025-06-04 19:44:21] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 16:19 input.tar.gz
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas 190496903 Jun  4 19:43 HITS.pool.root.1
[2025-06-04 19:44:21] -rw-------. 1 boincer umatlas   1464320 Jun  4 19:44 result.tar.gz
19:44:22 (2406206): run_atlas exited; CPU time 40137.809498
19:44:22 (2406206): called boinc_finish(0)

</stderr_txt>
]]>

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