Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:03:26 (992602): wrapper (7.7.26015): starting
17:03:26 (992602): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 17:03:26] Arguments: --nthreads 12
[2025-06-04 17:03:26] Threads: 12
[2025-06-04 17:03:26] Checking for CVMFS
[2025-06-04 17:03:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:03:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:03:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:03:27] 2.12.6.0 5109 32018 441248 146793 0 72 19347449 32935936 4979 16776704 0 125839071 99.672 110875480 32510 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 17:03:27] CVMFS is ok
[2025-06-04 17:03:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:03:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:03:27] Further information can be found at the LHC@home message board.
[2025-06-04 17:03:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:03:27] Checking for apptainer binary...
[2025-06-04 17:03:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:03:27] Running /usr/bin/apptainer --version
[2025-06-04 17:03:27] apptainer version 1.4.1-1.el9
[2025-06-04 17:03:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:03:27] c6-2-29-2.aglt2.org
[2025-06-04 17:03:27] apptainer works
[2025-06-04 17:03:27] Set ATHENA_PROC_NUMBER=12
[2025-06-04 17:03:27] Set ATHENA_CORE_NUMBER=12
[2025-06-04 17:03:27] Starting ATLAS job with PandaID=6667102159
[2025-06-04 17:03:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:48:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:48:50]  mtime=0
[2025-06-04 17:48:50]  protocol_id=None
[2025-06-04 17:48:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:48:50]  replicas=None
[2025-06-04 17:48:50]  scope=mc23_13p6TeV
[2025-06-04 17:48:50]  status=None
[2025-06-04 17:48:50]  status_code=0
[2025-06-04 17:48:50]  storage_token=
[2025-06-04 17:48:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667102159/log.44871837._068723.job.log.tgz.1
[2025-06-04 17:48:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/08/log.44871837._068723.job.log.tgz.1
[2025-06-04 17:48:50]  workdir=None
[2025-06-04 17:48:50] ]
[2025-06-04 17:48:50] 2025-06-04 21:48:25,912 | INFO     | transferring file log.44871837._068723.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667102159/log.44871837._068723.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 17:48:50] 2025-06-04 21:48:25,912 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667102159/log.44871837._068723.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._068723.job
[2025-06-04 17:48:50] 2025-06-04 21:48:25,924 | INFO     | adding to output.list: log.44871837._068723.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/08/log.44871837._068723.job.log.tg
[2025-06-04 17:48:50] 2025-06-04 21:48:25,925 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:48:50] 2025-06-04 21:48:25,925 | INFO     | summary of transferred files:
[2025-06-04 17:48:50] 2025-06-04 21:48:25,925 | INFO     |  -- lfn=log.44871837._068723.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:48:50] 2025-06-04 21:48:25,925 | INFO     | stage-out finished correctly
[2025-06-04 17:48:50] 2025-06-04 21:48:27,002 | INFO     | monitor loop #207: job 0:6667102159 is in state 'finished'
[2025-06-04 17:48:50] 2025-06-04 21:48:27,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:48:50] 2025-06-04 21:48:28,856 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:48:50] 2025-06-04 21:48:29,505 | INFO     | monitor loop #208: job 0:6667102159 is in state 'finished'
[2025-06-04 17:48:50] 2025-06-04 21:48:29,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:48:50] 2025-06-04 21:48:31,574 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-06-04 17:48:50] 2025-06-04 21:48:31,919 | INFO     | job 6667102159 has state=finished
[2025-06-04 17:48:50] 2025-06-04 21:48:31,920 | INFO     | preparing for final server update for job 6667102159 in state='finished'
[2025-06-04 17:48:50] 2025-06-04 21:48:31,920 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:48:50] 2025-06-04 21:48:31,920 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:48:50] 2025-06-04 21:48:31,920 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:48:50] 2025-06-04 21:48:31,920 | INFO     | job 6667102159 has finished - writing final server update
[2025-06-04 17:48:50] 2025-06-04 21:48:31,920 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:48:50] 2025-06-04 21:48:31,934 | INFO     | executing command: lscpu
[2025-06-04 17:48:50] 2025-06-04 21:48:31,982 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:48:50] 2025-06-04 21:48:32,009 | INFO     | monitor loop #209: job 0:6667102159 is in state 'finished'
[2025-06-04 17:48:50] 2025-06-04 21:48:32,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:48:50] 2025-06-04 21:48:32,377 | INFO     | PID=996837 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 17:48:50] 2025-06-04 21:48:32,378 | INFO     | .. there are 8 such processes running
[2025-06-04 17:48:50] 2025-06-04 21:48:34,513 | INFO     | monitor loop #210: job 0:6667102159 is in state 'finished'
[2025-06-04 17:48:50] 2025-06-04 21:48:34,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:48:50] 2025-06-04 21:48:34,534 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 17:48:50] 2025-06-04 21:48:34,535 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667102159/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:48:50] 2025-06-04 21:48:34,536 | INFO     | extracted standard info from prmon json
[2025-06-04 17:48:50] 2025-06-04 21:48:34,536 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:48:50] 2025-06-04 21:48:34,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:48:50] 2025-06-04 21:48:34,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:48:50] 2025-06-04 21:48:34,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:48:50] 2025-06-04 21:48:34,538 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:48:50] 2025-06-04 21:48:34,538 | INFO     | sum of square deviations: 15695178.0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,538 | INFO     | sum of deviations: -2372603418.0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | mean x: 1749072438.0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | mean y: 2506801.2972972975
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | -- intersect: 264405704058.9769
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | intersect: 264405704058.9769
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | chi2: 0.0757968143590661
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | -- intersect: 264405704058.9769
[2025-06-04 17:48:50] 2025-06-04 21:48:34,539 | INFO     | current memory leak: -151.17 B/s (using 37 data points, chi2=0.08)
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | ..............................
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . Timing measurements:
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . get job = 0 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . initial setup = 2 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . payload setup = 4 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . stage-in = 0 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . payload execution = 2668 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . stage-out = 0 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | . log creation = 0 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,540 | INFO     | ..............................
[2025-06-04 17:48:50] 2025-06-04 21:48:34,625 | INFO     | 
[2025-06-04 17:48:50] 2025-06-04 21:48:34,625 | INFO     | job summary report
[2025-06-04 17:48:50] 2025-06-04 21:48:34,625 | INFO     | --------------------------------------------------
[2025-06-04 17:48:50] 2025-06-04 21:48:34,625 | INFO     | PanDA job id: 6667102159
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | task id: 44871837
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | errors: (none)
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | pilot state: finished 
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | transexitcode: 0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | exeerrorcode: 0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | exeerrordiag: 
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | exitcode: 0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | exitmsg: OK
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | cpuconsumptiontime: 28686 s
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | nevents: 400
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | neventsw: 0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | pid: 1003522
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | pgrp: 1003522
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | corecount: 12
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | event service: False
[2025-06-04 17:48:50] 2025-06-04 21:48:34,626 | INFO     | sizes: {0: 2397275, 1: 2397389, 3: 2397623, 11: 2397651, 2676: 2422857, 2678: 2431798, 2681: 2431982, 2687: 2432152}
[2025-06-04 17:48:50] 2025-06-04 21:48:34,627 | INFO     | --------------------------------------------------
[2025-06-04 17:48:50] 2025-06-04 21:48:34,627 | INFO     | 
[2025-06-04 17:48:50] 2025-06-04 21:48:34,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 17:48:50] 2025-06-04 21:48:34,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | job 6667102159 has completed (purged errors)
[2025-06-04 17:48:50] 2025-06-04 21:48:34,643 | INFO     | overall cleanup function is called
[2025-06-04 17:48:50] 2025-06-04 21:48:35,652 | INFO     | --- collectZombieJob: --- 10, [1003522]
[2025-06-04 17:48:50] 2025-06-04 21:48:35,652 | INFO     | zombie collector waiting for pid 1003522
[2025-06-04 17:48:50] 2025-06-04 21:48:35,652 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:48:50] 2025-06-04 21:48:35,652 | INFO     | collected zombie processes
[2025-06-04 17:48:50] 2025-06-04 21:48:35,652 | INFO     | will attempt to kill all subprocesses of pid=1003522
[2025-06-04 17:48:50] 2025-06-04 21:48:35,804 | INFO     | process IDs to be killed: [1003522] (in reverse order)
[2025-06-04 17:48:50] 2025-06-04 21:48:35,854 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:48:50] 2025-06-04 21:48:35,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:48:50] 2025-06-04 21:48:35,860 | INFO     | did not find any defunct processes belonging to 1003522
[2025-06-04 17:48:50] 2025-06-04 21:48:35,866 | INFO     | did not find any defunct processes belonging to 1003522
[2025-06-04 17:48:50] 2025-06-04 21:48:35,866 | INFO     | ready for new job
[2025-06-04 17:48:50] 2025-06-04 21:48:35,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:48:50] 2025-06-04 21:48:35,868 | INFO     | **************************************
[2025-06-04 17:48:50] 2025-06-04 21:48:35,868 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:48:50] 2025-06-04 21:48:35,868 | INFO     | **************************************
[2025-06-04 17:48:50] 2025-06-04 21:48:35,868 | INFO     | 
[2025-06-04 17:48:50] 2025-06-04 21:48:35,881 | INFO     | architecture information:
[2025-06-04 17:48:50] 2025-06-04 21:48:35,881 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:48:50] 2025-06-04 21:48:35,890 | INFO     | cat /etc/os-release:
[2025-06-04 17:48:50] NAME="CentOS Linux"
[2025-06-04 17:48:50] VERSION="7 (Core)"
[2025-06-04 17:48:50] ID="centos"
[2025-06-04 17:48:50] ID_LIKE="rhel fedora"
[2025-06-04 17:48:50] VERSION_ID="7"
[2025-06-04 17:48:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:48:50] ANSI_COLOR="0;31"
[2025-06-04 17:48:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:48:50] HOME_URL="https://www.centos.org/"
[2025-06-04 17:48:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:48:50] 
[2025-06-04 17:48:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:48:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:48:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:48:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:48:50] 
[2025-06-04 17:48:50] 2025-06-04 21:48:35,890 | INFO     | **************************************
[2025-06-04 17:48:50] 2025-06-04 21:48:36,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 17:48:50] 2025-06-04 21:48:36,403 | INFO     | sufficient remaining disk space (76460064768 B)
[2025-06-04 17:48:50] 2025-06-04 21:48:36,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:48:50] 2025-06-04 21:48:36,403 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:48:50] 2025-06-04 21:48:36,404 | INFO     | update_server=False
[2025-06-04 17:48:50] 2025-06-04 21:48:36,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:48:50] 2025-06-04 21:48:36,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:48:50] 2025-06-04 21:48:36,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:48:50] 2025-06-04 21:48:36,404 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:48:50] 2025-06-04 21:48:36,405 | INFO     | aborting loop
[2025-06-04 17:48:50] 2025-06-04 21:48:36,405 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:48:50] 2025-06-04 21:48:36,405 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:48:50] 2025-06-04 21:48:36,405 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:48:50] 2025-06-04 21:48:36,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:48:50] 2025-06-04 21:48:36,731 | INFO     | all data control threads have been joined
[2025-06-04 17:48:50] 2025-06-04 21:48:36,891 | INFO     | all job control threads have been joined
[2025-06-04 17:48:50] 2025-06-04 21:48:37,408 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:37,409 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:37,411 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:37,533 | INFO     | all payload control threads have been joined
[2025-06-04 17:48:50] 2025-06-04 21:48:37,736 | INFO     | [data] control thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:37,856 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:37,897 | INFO     | [job] control thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:37,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,096 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,097 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,225 | INFO     | [job] validate thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,394 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,430 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,486 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,538 | INFO     | [payload] control thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:38,879 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:39,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:48:50] 2025-06-04 21:48:43,459 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:48:50] 2025-06-04 21:48:45,226 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836305323840)>', '<ExcThread(monitor, started 139835662653184)>']
[2025-06-04 17:48:50] 2025-06-04 21:48:45,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:48:50] 2025-06-04 21:48:45,450 | INFO     | [monitor] control thread has ended
[2025-06-04 17:48:50] 2025-06-04 21:48:50,229 | INFO     | all workflow threads have been joined
[2025-06-04 17:48:50] 2025-06-04 21:48:50,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:48:50] 2025-06-04 21:48:50,230 | INFO     | traces error code: 0
[2025-06-04 17:48:50] 2025-06-04 21:48:50,230 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:48:50] 2025-06-04 21:48:50,340 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:48:50] 2025-06-04 21:48:50,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:48:50] 2025-06-04 21:48:50,343 [wrapper] pilotpid: 996837
[2025-06-04 17:48:50] 2025-06-04 21:48:50,345 [wrapper] Pilot exit status: 0
[2025-06-04 17:48:50] 2025-06-04 21:48:50,352 [wrapper] pandaids: 6667102159
[2025-06-04 17:48:50] 2025-06-04 21:48:50,387 [wrapper] cleanup supervisor_pilot 1122219 996838
[2025-06-04 17:48:50] 2025-06-04 21:48:50,388 [wrapper] Test setup, not cleaning
[2025-06-04 17:48:50] 2025-06-04 21:48:50,390 [wrapper] apfmon messages muted
[2025-06-04 17:48:50] 2025-06-04 21:48:50,392 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:48:50] 2025-06-04 21:48:50,394 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:48:50]  *** Error codes and diagnostics ***
[2025-06-04 17:48:50]     "exeErrorCode": 0,
[2025-06-04 17:48:50]     "exeErrorDiag": "",
[2025-06-04 17:48:50]     "pilotErrorCode": 0,
[2025-06-04 17:48:50]     "pilotErrorDiag": "",
[2025-06-04 17:48:50]  *** Listing of results directory ***
[2025-06-04 17:48:50] total 411816
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas      5111 May 27 10:25 queuedata.json
[2025-06-04 17:48:50] -rwx------. 1 boincer umatlas     37140 May 27 10:25 runpilot2-wrapper.sh
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas       100 Jun  4 17:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:48:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 17:03 run_atlas
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas       105 Jun  4 17:03 job.xml
[2025-06-04 17:48:50] -rw-r--r--. 2 boincer umatlas 224929901 Jun  4 17:03 EVNT.44871834._002703.pool.root.1
[2025-06-04 17:48:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:03 start_atlas.sh
[2025-06-04 17:48:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 17:03 shared
[2025-06-04 17:48:50] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 17:03 input.tar.gz
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas         0 Jun  4 17:03 boinc_lockfile
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas      2557 Jun  4 17:03 pandaJob.out
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas    987032 Jun  4 17:03 agis_schedconf.cvmfs.json
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas   1598969 Jun  4 17:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:48:50] drwx------. 4 boincer umatlas      4096 Jun  4 17:03 pilot3
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 17:45 init_data.xml
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas 191693340 Jun  4 17:47 HITS.44871837._068723.pool.root.1
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas       529 Jun  4 17:48 boinc_task_state.xml
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas        95 Jun  4 17:48 pilot_heartbeat.json
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas      1038 Jun  4 17:48 memory_monitor_summary.json
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas    332397 Jun  4 17:48 log.44871837._068723.job.log.tgz.1
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas      7722 Jun  4 17:48 heartbeat.json
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 17:48 boinc_mmap_file
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas        27 Jun  4 17:48 wrapper_checkpoint.txt
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas      4476 Jun  4 17:48 pilotlog.txt
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas    290637 Jun  4 17:48 log.44871837._068723.job.log.1
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas       357 Jun  4 17:48 output.list
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas       620 Jun  4 17:48 runtime_log
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas    645120 Jun  4 17:48 result.tar.gz
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 17:48 runtime_log.err
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas       651 Jun  4 17:48 mnwKDmlQAe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFeZKDmswHrDm.diag
[2025-06-04 17:48:50] -rw-r--r--. 1 boincer umatlas     21740 Jun  4 17:48 stderr.txt
[2025-06-04 17:48:50] HITS file was successfully produced:
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas 191693340 Jun  4 17:47 shared/HITS.pool.root.1
[2025-06-04 17:48:50]  *** Contents of shared directory: ***
[2025-06-04 17:48:50] total 408012
[2025-06-04 17:48:50] -rw-r--r--. 2 boincer umatlas 224929901 Jun  4 17:03 ATLAS.root_0
[2025-06-04 17:48:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 17:03 start_atlas.sh
[2025-06-04 17:48:50] -rw-r--r--. 2 boincer umatlas    508876 Jun  4 17:03 input.tar.gz
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas 191693340 Jun  4 17:47 HITS.pool.root.1
[2025-06-04 17:48:50] -rw-------. 1 boincer umatlas    645120 Jun  4 17:48 result.tar.gz
17:48:51 (992602): run_atlas exited; CPU time 28722.486388
17:48:51 (992602): called boinc_finish(0)

</stderr_txt>
]]>

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