Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:06:40 (3376999): wrapper (7.7.26015): starting
16:06:40 (3376999): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 16:06:40] Arguments: --nthreads 12
[2025-06-04 16:06:40] Threads: 12
[2025-06-04 16:06:40] Checking for CVMFS
[2025-06-04 16:06:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:06:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:06:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:06:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:06:40] 2.12.6.0 5653 1279 135476 146792 2 557 23144968 32935937 9038 16776704 0 4957245 99.697 3487769 37673 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 16:06:40] CVMFS is ok
[2025-06-04 16:06:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:06:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:06:40] Further information can be found at the LHC@home message board.
[2025-06-04 16:06:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:06:40] Checking for apptainer binary...
[2025-06-04 16:06:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:06:40] Running /usr/bin/apptainer --version
[2025-06-04 16:06:40] apptainer version 1.4.1-1.el9
[2025-06-04 16:06:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:06:41] c6-1-24-2.aglt2.org
[2025-06-04 16:06:41] apptainer works
[2025-06-04 16:06:41] Set ATHENA_PROC_NUMBER=12
[2025-06-04 16:06:41] Set ATHENA_CORE_NUMBER=12
[2025-06-04 16:06:41] Starting ATLAS job with PandaID=6677397941
[2025-06-04 16:06:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:56:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:56:04]  filesize=360755
[2025-06-04 16:56:04]  filetype=log
[2025-06-04 16:56:04]  guid=6753887c-3e91-40c5-ac55-704205e492f3
[2025-06-04 16:56:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 16:56:04]  is_altstaged=None
[2025-06-04 16:56:04]  is_tar=False
[2025-06-04 16:56:04]  lfn=log.45006595._010500.job.log.tgz.1
[2025-06-04 16:56:04]  mtime=0
[2025-06-04 16:56:04]  protocol_id=None
[2025-06-04 16:56:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:56:04]  replicas=None
[2025-06-04 16:56:04]  scope=mc23_13p6TeV
[2025-06-04 16:56:04]  status=None
[2025-06-04 16:56:04]  status_code=0
[2025-06-04 16:56:04]  storage_token=
[2025-06-04 16:56:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677397941/log.45006595._010500.job.log.tgz.1
[2025-06-04 16:56:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/53/log.45006595._010500.job.log.tgz.1
[2025-06-04 16:56:04]  workdir=None
[2025-06-04 16:56:04] ]
[2025-06-04 16:56:04] 2025-06-04 20:55:48,197 | INFO     | transferring file log.45006595._010500.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677397941/log.45006595._010500.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 16:56:04] 2025-06-04 20:55:48,197 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677397941/log.45006595._010500.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._010500.job
[2025-06-04 16:56:04] 2025-06-04 20:55:48,215 | INFO     | adding to output.list: log.45006595._010500.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/53/log.45006595._010500.job.log.tg
[2025-06-04 16:56:04] 2025-06-04 20:55:48,216 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:56:04] 2025-06-04 20:55:48,216 | INFO     | summary of transferred files:
[2025-06-04 16:56:04] 2025-06-04 20:55:48,216 | INFO     |  -- lfn=log.45006595._010500.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:56:04] 2025-06-04 20:55:48,216 | INFO     | stage-out finished correctly
[2025-06-04 16:56:04] 2025-06-04 20:55:49,014 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:56:04] 2025-06-04 20:55:49,459 | INFO     | job 6677397941 has state=finished
[2025-06-04 16:56:04] 2025-06-04 20:55:49,460 | INFO     | preparing for final server update for job 6677397941 in state='finished'
[2025-06-04 16:56:04] 2025-06-04 20:55:49,460 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:56:04] 2025-06-04 20:55:49,460 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:56:04] 2025-06-04 20:55:49,460 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:56:04] 2025-06-04 20:55:49,461 | INFO     | job 6677397941 has finished - writing final server update
[2025-06-04 16:56:04] 2025-06-04 20:55:49,461 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:56:04] 2025-06-04 20:55:49,476 | INFO     | executing command: lscpu
[2025-06-04 16:56:04] 2025-06-04 20:55:49,553 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:56:04] 2025-06-04 20:55:51,228 | WARNING  | process 3387122 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:56:04] 2025-06-04 20:55:51,229 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677397941/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:56:04] 2025-06-04 20:55:51,476 | INFO     | number of running child processes to parent process 3387122: 1
[2025-06-04 16:56:04] 2025-06-04 20:55:51,476 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:56:04] 2025-06-04 20:55:53,394 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 16:56:04] 2025-06-04 20:55:53,395 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677397941/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:56:04] 2025-06-04 20:55:53,396 | INFO     | extracted standard info from prmon json
[2025-06-04 16:56:04] 2025-06-04 20:55:53,396 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:56:04] 2025-06-04 20:55:53,396 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:56:04] 2025-06-04 20:55:53,396 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:56:04] 2025-06-04 20:55:53,397 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:56:04] 2025-06-04 20:55:53,398 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:56:04] 2025-06-04 20:55:53,399 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,399 | INFO     | sum of deviations: -1885898691.9999998
[2025-06-04 16:56:04] 2025-06-04 20:55:53,399 | INFO     | mean x: 1749069161.0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,399 | INFO     | mean y: 2433871.3170731706
[2025-06-04 16:56:04] 2025-06-04 20:55:53,399 | INFO     | -- intersect: 154440295398.71722
[2025-06-04 16:56:04] 2025-06-04 20:55:53,399 | INFO     | intersect: 154440295398.71722
[2025-06-04 16:56:04] 2025-06-04 20:55:53,400 | INFO     | chi2: 0.0752163414182632
[2025-06-04 16:56:04] 2025-06-04 20:55:53,400 | INFO     | -- intersect: 154440295398.71722
[2025-06-04 16:56:04] 2025-06-04 20:55:53,400 | INFO     | current memory leak: -88.30 B/s (using 41 data points, chi2=0.08)
[2025-06-04 16:56:04] 2025-06-04 20:55:53,400 | INFO     | ..............................
[2025-06-04 16:56:04] 2025-06-04 20:55:53,400 | INFO     | . Timing measurements:
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . get job = 0 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . initial setup = 2 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . payload setup = 6 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . stage-in = 0 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . payload execution = 2913 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . stage-out = 0 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | . log creation = 0 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,401 | INFO     | ..............................
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | 
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | job summary report
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | --------------------------------------------------
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | PanDA job id: 6677397941
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | task id: 45006595
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | errors: (none)
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:56:04] 2025-06-04 20:55:53,514 | INFO     | pilot state: finished 
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | transexitcode: 0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | exeerrorcode: 0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | exeerrordiag: 
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | exitcode: 0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | exitmsg: OK
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | cpuconsumptiontime: 30614 s
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | nevents: 400
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | neventsw: 0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | pid: 3387122
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | pgrp: 3387122
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | corecount: 12
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | event service: False
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | sizes: {0: 2397169, 1: 2397368, 4: 2397574, 11: 2397602, 2920: 2422934, 2922: 2431875, 2923: 2432059, 2928: 2432229}
[2025-06-04 16:56:04] 2025-06-04 20:55:53,515 | INFO     | --------------------------------------------------
[2025-06-04 16:56:04] 2025-06-04 20:55:53,516 | INFO     | 
[2025-06-04 16:56:04] 2025-06-04 20:55:53,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 16:56:04] 2025-06-04 20:55:53,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | job 6677397941 has completed (purged errors)
[2025-06-04 16:56:04] 2025-06-04 20:55:53,535 | INFO     | overall cleanup function is called
[2025-06-04 16:56:04] 2025-06-04 20:55:54,543 | INFO     | --- collectZombieJob: --- 10, [3387122]
[2025-06-04 16:56:04] 2025-06-04 20:55:54,543 | INFO     | zombie collector waiting for pid 3387122
[2025-06-04 16:56:04] 2025-06-04 20:55:54,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:56:04] 2025-06-04 20:55:54,543 | INFO     | collected zombie processes
[2025-06-04 16:56:04] 2025-06-04 20:55:54,543 | INFO     | will attempt to kill all subprocesses of pid=3387122
[2025-06-04 16:56:04] 2025-06-04 20:55:54,793 | INFO     | process IDs to be killed: [3387122] (in reverse order)
[2025-06-04 16:56:04] 2025-06-04 20:55:54,850 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:56:04] 2025-06-04 20:55:54,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:56:04] 2025-06-04 20:55:54,862 | INFO     | did not find any defunct processes belonging to 3387122
[2025-06-04 16:56:04] 2025-06-04 20:55:54,874 | INFO     | did not find any defunct processes belonging to 3387122
[2025-06-04 16:56:04] 2025-06-04 20:55:54,874 | INFO     | ready for new job
[2025-06-04 16:56:04] 2025-06-04 20:55:54,875 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:56:04] 2025-06-04 20:55:54,877 | INFO     | **************************************
[2025-06-04 16:56:04] 2025-06-04 20:55:54,877 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:56:04] 2025-06-04 20:55:54,877 | INFO     | **************************************
[2025-06-04 16:56:04] 2025-06-04 20:55:54,877 | INFO     | 
[2025-06-04 16:56:04] 2025-06-04 20:55:54,893 | INFO     | architecture information:
[2025-06-04 16:56:04] 2025-06-04 20:55:54,894 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:56:04] 2025-06-04 20:55:54,911 | INFO     | cat /etc/os-release:
[2025-06-04 16:56:04] NAME="CentOS Linux"
[2025-06-04 16:56:04] VERSION="7 (Core)"
[2025-06-04 16:56:04] ID="centos"
[2025-06-04 16:56:04] ID_LIKE="rhel fedora"
[2025-06-04 16:56:04] VERSION_ID="7"
[2025-06-04 16:56:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:56:04] ANSI_COLOR="0;31"
[2025-06-04 16:56:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:56:04] HOME_URL="https://www.centos.org/"
[2025-06-04 16:56:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:56:04] 
[2025-06-04 16:56:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:56:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:56:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:56:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:56:04] 
[2025-06-04 16:56:04] 2025-06-04 20:55:54,911 | INFO     | **************************************
[2025-06-04 16:56:04] 2025-06-04 20:55:55,414 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 16:56:04] 2025-06-04 20:55:55,430 | INFO     | sufficient remaining disk space (76509347840 B)
[2025-06-04 16:56:04] 2025-06-04 20:55:55,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:56:04] 2025-06-04 20:55:55,431 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:56:04] 2025-06-04 20:55:55,431 | INFO     | update_server=False
[2025-06-04 16:56:04] 2025-06-04 20:55:55,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:56:04] 2025-06-04 20:55:55,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:56:04] 2025-06-04 20:55:55,432 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:56:04] 2025-06-04 20:55:55,432 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:56:04] 2025-06-04 20:55:55,432 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:56:04] 2025-06-04 20:55:55,432 | INFO     | aborting loop
[2025-06-04 16:56:04] 2025-06-04 20:55:55,433 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:56:04] 2025-06-04 20:55:55,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:56:04] 2025-06-04 20:55:55,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:56:04] 2025-06-04 20:55:55,541 | INFO     | all data control threads have been joined
[2025-06-04 16:56:04] 2025-06-04 20:55:55,842 | INFO     | all job control threads have been joined
[2025-06-04 16:56:04] 2025-06-04 20:55:56,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:56:04] 2025-06-04 20:55:56,436 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:56,437 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:56,438 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:56,546 | INFO     | [data] control thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:56,838 | INFO     | all payload control threads have been joined
[2025-06-04 16:56:04] 2025-06-04 20:55:56,847 | INFO     | [job] control thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:56,870 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:56,888 | INFO     | [job] validate thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,012 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,093 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,408 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,766 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,820 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,841 | INFO     | [payload] control thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:57,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:58,280 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:59,438 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:56:04] 2025-06-04 20:55:59,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701078746944)>', '<ExcThread(monitor, started 140700310042368)>']
[2025-06-04 16:56:04] 2025-06-04 20:56:00,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:56:04] 2025-06-04 20:56:00,459 | INFO     | [monitor] control thread has ended
[2025-06-04 16:56:04] 2025-06-04 20:56:04,562 | INFO     | all workflow threads have been joined
[2025-06-04 16:56:04] 2025-06-04 20:56:04,563 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:56:04] 2025-06-04 20:56:04,563 | INFO     | traces error code: 0
[2025-06-04 16:56:04] 2025-06-04 20:56:04,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:56:04] 2025-06-04 20:56:04,728 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:56:04] 2025-06-04 20:56:04,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:56:04] 2025-06-04 20:56:04,734 [wrapper] pilotpid: 3380609
[2025-06-04 16:56:04] 2025-06-04 20:56:04,737 [wrapper] Pilot exit status: 0
[2025-06-04 16:56:04] 2025-06-04 20:56:04,749 [wrapper] pandaids: 6677397941
[2025-06-04 16:56:04] 2025-06-04 20:56:04,813 [wrapper] cleanup supervisor_pilot 3536082 3380610
[2025-06-04 16:56:04] 2025-06-04 20:56:04,817 [wrapper] Test setup, not cleaning
[2025-06-04 16:56:04] 2025-06-04 20:56:04,820 [wrapper] apfmon messages muted
[2025-06-04 16:56:04] 2025-06-04 20:56:04,823 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:56:04] 2025-06-04 20:56:04,826 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:56:04]  *** Error codes and diagnostics ***
[2025-06-04 16:56:04]     "exeErrorCode": 0,
[2025-06-04 16:56:04]     "exeErrorDiag": "",
[2025-06-04 16:56:04]     "pilotErrorCode": 0,
[2025-06-04 16:56:04]     "pilotErrorDiag": "",
[2025-06-04 16:56:04]  *** Listing of results directory ***
[2025-06-04 16:56:04] total 394420
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 15:34 pilot3.tar.gz
[2025-06-04 16:56:04] -rwx------. 1 boincer umatlas     37140 Jun  2 16:04 runpilot2-wrapper.sh
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 16:04 queuedata.json
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas       100 Jun  4 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:56:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 16:06 run_atlas
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas       105 Jun  4 16:06 job.xml
[2025-06-04 16:56:04] -rw-r--r--. 2 boincer umatlas 217643650 Jun  4 16:06 EVNT.45006593._000420.pool.root.1
[2025-06-04 16:56:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:06 start_atlas.sh
[2025-06-04 16:56:04] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 16:06 shared
[2025-06-04 16:56:04] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 16:06 input.tar.gz
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas         0 Jun  4 16:06 boinc_lockfile
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 16:06 pandaJob.out
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas    991007 Jun  4 16:06 agis_schedconf.cvmfs.json
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas   1598969 Jun  4 16:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:56:04] drwx------. 4 boincer umatlas      4096 Jun  4 16:06 pilot3
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 16:54 init_data.xml
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas 181055232 Jun  4 16:55 HITS.45006595._010500.pool.root.1
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas       529 Jun  4 16:55 boinc_task_state.xml
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas        95 Jun  4 16:55 pilot_heartbeat.json
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas      1039 Jun  4 16:55 memory_monitor_summary.json
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas    360755 Jun  4 16:55 log.45006595._010500.job.log.tgz.1
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas      7716 Jun  4 16:55 heartbeat.json
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 16:56 boinc_mmap_file
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas        27 Jun  4 16:56 wrapper_checkpoint.txt
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas      4476 Jun  4 16:56 pilotlog.txt
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas    311674 Jun  4 16:56 log.45006595._010500.job.log.1
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas       357 Jun  4 16:56 output.list
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas       620 Jun  4 16:56 runtime_log
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas    696320 Jun  4 16:56 result.tar.gz
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas       653 Jun  4 16:56 wTUKDm1ZQg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAWWKDmr2KPQn.diag
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 16:56 runtime_log.err
[2025-06-04 16:56:04] -rw-r--r--. 1 boincer umatlas     21175 Jun  4 16:56 stderr.txt
[2025-06-04 16:56:04] HITS file was successfully produced:
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas 181055232 Jun  4 16:55 shared/HITS.pool.root.1
[2025-06-04 16:56:04]  *** Contents of shared directory: ***
[2025-06-04 16:56:04] total 390560
[2025-06-04 16:56:04] -rw-r--r--. 2 boincer umatlas 217643650 Jun  4 16:06 ATLAS.root_0
[2025-06-04 16:56:04] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:06 start_atlas.sh
[2025-06-04 16:56:04] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 16:06 input.tar.gz
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas 181055232 Jun  4 16:55 HITS.pool.root.1
[2025-06-04 16:56:04] -rw-------. 1 boincer umatlas    696320 Jun  4 16:56 result.tar.gz
16:56:06 (3376999): run_atlas exited; CPU time 30650.350656
16:56:06 (3376999): called boinc_finish(0)

</stderr_txt>
]]>

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