Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:05:28 (1345411): wrapper (7.7.26015): starting
16:05:28 (1345411): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 16:05:28] Arguments: --nthreads 10
[2025-06-04 16:05:28] Threads: 10
[2025-06-04 16:05:28] Checking for CVMFS
[2025-06-04 16:05:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:05:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:05:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:05:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:05:29] 2.12.6.0 8362 279 105404 146792 1 217 15604408 21551104 17335 16776704 0 1399736 99.194 2947408 34766 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 16:05:29] CVMFS is ok
[2025-06-04 16:05:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:05:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:05:29] Further information can be found at the LHC@home message board.
[2025-06-04 16:05:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:05:29] Checking for apptainer binary...
[2025-06-04 16:05:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:05:29] Running /usr/bin/apptainer --version
[2025-06-04 16:05:29] apptainer version 1.4.1-1.el9
[2025-06-04 16:05:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:05:30] c-16-30.aglt2.org
[2025-06-04 16:05:30] apptainer works
[2025-06-04 16:05:30] Set ATHENA_PROC_NUMBER=10
[2025-06-04 16:05:30] Set ATHENA_CORE_NUMBER=10
[2025-06-04 16:05:30] Starting ATLAS job with PandaID=6667730613
[2025-06-04 16:05:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:42:47]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:42:47] 2025-06-05 14:42:24,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:42:47] 2025-06-05 14:42:27,010 | INFO     | monitor loop #3406: job 0:6667730613 is in state 'finished'
[2025-06-05 10:42:47] 2025-06-05 14:42:27,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:42:47] 2025-06-05 14:42:29,515 | INFO     | monitor loop #3407: job 0:6667730613 is in state 'finished'
[2025-06-05 10:42:47] 2025-06-05 14:42:29,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:42:47] 2025-06-05 14:42:32,020 | INFO     | monitor loop #3408: job 0:6667730613 is in state 'finished'
[2025-06-05 10:42:47] 2025-06-05 14:42:32,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:42:47] 2025-06-05 14:42:33,825 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 10:42:47] 2025-06-05 14:42:33,825 | INFO     | using path: /var/lib/condor/boinchome/slots/0/PanDA_Pilot-6667730613/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 10:42:47] 2025-06-05 14:42:33,826 | INFO     | extracted standard info from prmon json
[2025-06-05 10:42:47] 2025-06-05 14:42:33,826 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:42:47] 2025-06-05 14:42:33,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:42:47] 2025-06-05 14:42:33,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:42:47] 2025-06-05 14:42:33,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:42:47] 2025-06-05 14:42:33,902 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:42:47] 2025-06-05 14:42:33,910 | INFO     | sum of square deviations: 407108205634.60785
[2025-06-05 10:42:47] 2025-06-05 14:42:33,949 | INFO     | sum of deviations: 48599058463.142265
[2025-06-05 10:42:47] 2025-06-05 14:42:33,950 | INFO     | mean x: 1749101112.8739727
[2025-06-05 10:42:47] 2025-06-05 14:42:33,950 | INFO     | mean y: 2165606.682191781
[2025-06-05 10:42:47] 2025-06-05 14:42:33,950 | INFO     | -- intersect: -206635557.3965389
[2025-06-05 10:42:47] 2025-06-05 14:42:33,950 | INFO     | intersect: -206635557.3965389
[2025-06-05 10:42:47] 2025-06-05 14:42:33,952 | INFO     | chi2: 4.43553795741899
[2025-06-05 10:42:47] 2025-06-05 14:42:33,954 | INFO     | sum of square deviations: 401556960868.27124
[2025-06-05 10:42:47] 2025-06-05 14:42:33,993 | INFO     | sum of deviations: 167936580485.6753
[2025-06-05 10:42:47] 2025-06-05 14:42:33,994 | INFO     | mean x: 1749100960.3779817
[2025-06-05 10:42:47] 2025-06-05 14:42:33,994 | INFO     | mean y: 2168878.5614678897
[2025-06-05 10:42:47] 2025-06-05 14:42:33,994 | INFO     | -- intersect: -729328923.3318186
[2025-06-05 10:42:47] 2025-06-05 14:42:33,994 | INFO     | intersect: -729328923.3318186
[2025-06-05 10:42:47] 2025-06-05 14:42:33,996 | INFO     | chi2: 3.485107765610964
[2025-06-05 10:42:47] 2025-06-05 14:42:33,996 | INFO     | current chi2=3.485107765610964 (change=21.427619398867126 %)
[2025-06-05 10:42:47] 2025-06-05 14:42:33,996 | INFO     | right removable region: 1089
[2025-06-05 10:42:47] 2025-06-05 14:42:33,998 | INFO     | sum of square deviations: 401556377098.2716
[2025-06-05 10:42:47] 2025-06-05 14:42:34,034 | INFO     | sum of deviations: -157006169274.71753
[2025-06-05 10:42:47] 2025-06-05 14:42:34,034 | INFO     | mean x: 1749101265.3779817
[2025-06-05 10:42:47] 2025-06-05 14:42:34,034 | INFO     | mean y: 2171248.028440367
[2025-06-05 10:42:47] 2025-06-05 14:42:34,034 | INFO     | -- intersect: 686059501.3666539
[2025-06-05 10:42:47] 2025-06-05 14:42:34,035 | INFO     | intersect: 686059501.3666539
[2025-06-05 10:42:47] 2025-06-05 14:42:34,036 | INFO     | chi2: 2.458896997321456
[2025-06-05 10:42:47] 2025-06-05 14:42:34,036 | INFO     | current chi2=2.458896997321456 (change=44.56372550687693 %)
[2025-06-05 10:42:47] 2025-06-05 14:42:34,038 | INFO     | sum of square deviations: 396055247186.8987
[2025-06-05 10:42:47] 2025-06-05 14:42:34,070 | INFO     | sum of deviations: -245726501029.7548
[2025-06-05 10:42:47] 2025-06-05 14:42:34,070 | INFO     | mean x: 1749101417.8820276
[2025-06-05 10:42:47] 2025-06-05 14:42:34,070 | INFO     | mean y: 2173706.3612903226
[2025-06-05 10:42:47] 2025-06-05 14:42:34,070 | INFO     | -- intersect: 1087377284.435615
[2025-06-05 10:42:47] 2025-06-05 14:42:34,070 | INFO     | intersect: 1087377284.435615
[2025-06-05 10:42:47] 2025-06-05 14:42:34,072 | INFO     | chi2: 2.10925544233248
[2025-06-05 10:42:47] 2025-06-05 14:42:34,072 | INFO     | current chi2=2.10925544233248 (change=14.21944698658992 %)
[2025-06-05 10:42:47] 2025-06-05 14:42:34,072 | INFO     | left removable region: 20
[2025-06-05 10:42:47] 2025-06-05 14:42:34,074 | INFO     | sum of square deviations: 378790909081.3039
[2025-06-05 10:42:47] 2025-06-05 14:42:34,105 | INFO     | sum of deviations: -152111975973.7176
[2025-06-05 10:42:47] 2025-06-05 14:42:34,105 | INFO     | mean x: 1749101539.88681
[2025-06-05 10:42:47] 2025-06-05 14:42:34,106 | INFO     | mean y: 2178728.027128157
[2025-06-05 10:42:47] 2025-06-05 14:42:34,106 | INFO     | -- intersect: 704569638.2423143
[2025-06-05 10:42:47] 2025-06-05 14:42:34,106 | INFO     | intersect: 704569638.2423143
[2025-06-05 10:42:47] 2025-06-05 14:42:34,107 | INFO     | chi2: 0.9994095347401492
[2025-06-05 10:42:47] 2025-06-05 14:42:34,108 | INFO     | -- intersect: 704569638.2423143
[2025-06-05 10:42:47] 2025-06-05 14:42:34,108 | INFO     | current memory leak: -0.40 B/s (using 1069 data points, chi2=1.00)
[2025-06-05 10:42:47] 2025-06-05 14:42:34,109 | INFO     | ..............................
[2025-06-05 10:42:47] 2025-06-05 14:42:34,109 | INFO     | . Timing measurements:
[2025-06-05 10:42:47] 2025-06-05 14:42:34,109 | INFO     | . get job = 0 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | . initial setup = 16 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | . payload setup = 49 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | . stage-in = 0 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | . payload execution = 66806 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | . stage-out = 14 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | . log creation = 0 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,110 | INFO     | ..............................
[2025-06-05 10:42:47] 2025-06-05 14:42:34,294 | INFO     | 
[2025-06-05 10:42:47] 2025-06-05 14:42:34,294 | INFO     | job summary report
[2025-06-05 10:42:47] 2025-06-05 14:42:34,294 | INFO     | --------------------------------------------------
[2025-06-05 10:42:47] 2025-06-05 14:42:34,294 | INFO     | PanDA job id: 6667730613
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | task id: 44871837
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | errors: (none)
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | pilot state: finished 
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | transexitcode: 0
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | exeerrorcode: 0
[2025-06-05 10:42:47] 2025-06-05 14:42:34,295 | INFO     | exeerrordiag: 
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | exitcode: 0
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | exitmsg: OK
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | cpuconsumptiontime: 106886 s
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | nevents: 400
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | neventsw: 0
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | pid: 1364856
[2025-06-05 10:42:47] 2025-06-05 14:42:34,296 | INFO     | pgrp: 1364856
[2025-06-05 10:42:47] 2025-06-05 14:42:34,316 | INFO     | corecount: 10
[2025-06-05 10:42:47] 2025-06-05 14:42:34,316 | INFO     | event service: False
[2025-06-05 10:42:47] 2025-06-05 14:42:34,316 | INFO     | sizes: {0: 2397176, 1: 2397232, 2: 2397260, 3: 2397487, 14: 2397487, 17: 2397721, 25: 2397877, 66861: 2450564, 66876: 2459527, 66879: 2459583, 66900: 2459753}
[2025-06-05 10:42:47] 2025-06-05 14:42:34,316 | INFO     | --------------------------------------------------
[2025-06-05 10:42:47] 2025-06-05 14:42:34,317 | INFO     | 
[2025-06-05 10:42:47] 2025-06-05 14:42:34,317 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-06-05 10:42:47] 2025-06-05 14:42:34,409 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,409 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,409 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,410 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,411 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,412 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:42:47] 2025-06-05 14:42:34,412 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,412 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:42:47] 2025-06-05 14:42:34,412 | INFO     | job 6667730613 has completed (purged errors)
[2025-06-05 10:42:47] 2025-06-05 14:42:34,412 | INFO     | overall cleanup function is called
[2025-06-05 10:42:47] 2025-06-05 14:42:35,428 | INFO     | --- collectZombieJob: --- 10, [1364856]
[2025-06-05 10:42:47] 2025-06-05 14:42:35,428 | INFO     | zombie collector waiting for pid 1364856
[2025-06-05 10:42:47] 2025-06-05 14:42:35,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:42:47] 2025-06-05 14:42:35,428 | INFO     | collected zombie processes
[2025-06-05 10:42:47] 2025-06-05 14:42:35,428 | INFO     | will attempt to kill all subprocesses of pid=1364856
[2025-06-05 10:42:47] 2025-06-05 14:42:36,117 | INFO     | process IDs to be killed: [1364856] (in reverse order)
[2025-06-05 10:42:47] 2025-06-05 14:42:36,346 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:42:47] 2025-06-05 14:42:36,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:42:47] 2025-06-05 14:42:36,391 | INFO     | did not find any defunct processes belonging to 1364856
[2025-06-05 10:42:47] 2025-06-05 14:42:36,432 | INFO     | did not find any defunct processes belonging to 1364856
[2025-06-05 10:42:47] 2025-06-05 14:42:36,433 | INFO     | ready for new job
[2025-06-05 10:42:47] 2025-06-05 14:42:36,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:42:47] 2025-06-05 14:42:36,436 | INFO     | **************************************
[2025-06-05 10:42:47] 2025-06-05 14:42:36,436 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:42:47] 2025-06-05 14:42:36,436 | INFO     | **************************************
[2025-06-05 10:42:47] 2025-06-05 14:42:36,437 | INFO     | 
[2025-06-05 10:42:47] 2025-06-05 14:42:36,452 | INFO     | architecture information:
[2025-06-05 10:42:47] 2025-06-05 14:42:36,453 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:42:47] 2025-06-05 14:42:36,500 | INFO     | cat /etc/os-release:
[2025-06-05 10:42:47] NAME="CentOS Linux"
[2025-06-05 10:42:47] VERSION="7 (Core)"
[2025-06-05 10:42:47] ID="centos"
[2025-06-05 10:42:47] ID_LIKE="rhel fedora"
[2025-06-05 10:42:47] VERSION_ID="7"
[2025-06-05 10:42:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:42:47] ANSI_COLOR="0;31"
[2025-06-05 10:42:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:42:47] HOME_URL="https://www.centos.org/"
[2025-06-05 10:42:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:42:47] 
[2025-06-05 10:42:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:42:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:42:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:42:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:42:47] 
[2025-06-05 10:42:47] 2025-06-05 14:42:36,500 | INFO     | **************************************
[2025-06-05 10:42:47] 2025-06-05 14:42:37,006 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-06-05 10:42:47] 2025-06-05 14:42:37,064 | INFO     | sufficient remaining disk space (1799806255104 B)
[2025-06-05 10:42:47] 2025-06-05 14:42:37,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:42:47] 2025-06-05 14:42:37,065 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:42:47] 2025-06-05 14:42:37,065 | INFO     | update_server=False
[2025-06-05 10:42:47] 2025-06-05 14:42:37,065 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:42:47] 2025-06-05 14:42:37,065 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 10:42:47] 2025-06-05 14:42:37,066 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:42:47] 2025-06-05 14:42:37,066 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:42:47] 2025-06-05 14:42:37,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:42:47] 2025-06-05 14:42:37,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:42:47] 2025-06-05 14:42:37,666 | INFO     | all data control threads have been joined
[2025-06-05 10:42:47] 2025-06-05 14:42:38,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:42:47] 2025-06-05 14:42:38,051 | INFO     | aborting loop
[2025-06-05 10:42:47] 2025-06-05 14:42:38,071 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:38,185 | INFO     | all payload control threads have been joined
[2025-06-05 10:42:47] 2025-06-05 14:42:38,258 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:38,312 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:38,415 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:38,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:42:47] 2025-06-05 14:42:38,672 | INFO     | [data] control thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:38,708 | INFO     | all job control threads have been joined
[2025-06-05 10:42:47] 2025-06-05 14:42:38,770 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,057 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,067 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,149 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,191 | INFO     | [payload] control thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,228 | INFO     | [job] validate thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:39,308 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:42:47] 2025-06-05 14:42:39,714 | INFO     | [job] control thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:40,314 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:40,425 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:41,239 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:42:47] 2025-06-05 14:42:41,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364130105152)>', '<ExcThread(monitor, started 140363784234752)>']
[2025-06-05 10:42:47] 2025-06-05 14:42:42,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:42:47] 2025-06-05 14:42:42,094 | INFO     | [monitor] control thread has ended
[2025-06-05 10:42:47] 2025-06-05 14:42:46,881 | INFO     | all workflow threads have been joined
[2025-06-05 10:42:47] 2025-06-05 14:42:46,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:42:47] 2025-06-05 14:42:46,881 | INFO     | traces error code: 0
[2025-06-05 10:42:47] 2025-06-05 14:42:46,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:42:47] 2025-06-05 14:42:47,200 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:42:47] 2025-06-05 14:42:47,204 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:42:47] 2025-06-05 14:42:47,206 [wrapper] pilotpid: 1351570
[2025-06-05 10:42:47] 2025-06-05 14:42:47,209 [wrapper] Pilot exit status: 0
[2025-06-05 10:42:47] 2025-06-05 14:42:47,293 [wrapper] pandaids: 6667730613
[2025-06-05 10:42:47] 2025-06-05 14:42:47,479 [wrapper] cleanup supervisor_pilot 2249636 1351571
[2025-06-05 10:42:47] 2025-06-05 14:42:47,488 [wrapper] Test setup, not cleaning
[2025-06-05 10:42:47] 2025-06-05 14:42:47,492 [wrapper] apfmon messages muted
[2025-06-05 10:42:47] 2025-06-05 14:42:47,495 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:42:47] 2025-06-05 14:42:47,498 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:42:47]  *** Error codes and diagnostics ***
[2025-06-05 10:42:47]     "exeErrorCode": 0,
[2025-06-05 10:42:47]     "exeErrorDiag": "",
[2025-06-05 10:42:47]     "pilotErrorCode": 0,
[2025-06-05 10:42:47]     "pilotErrorDiag": "",
[2025-06-05 10:42:47]  *** Listing of results directory ***
[2025-06-05 10:42:47] total 433148
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas    495897 May 27 18:42 pilot3.tar.gz
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas      5111 May 27 19:10 queuedata.json
[2025-06-05 10:42:47] -rwx------. 1 boincer umatlas     37140 May 27 19:14 runpilot2-wrapper.sh
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas       100 Jun  4 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:42:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 16:05 run_atlas
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas       105 Jun  4 16:05 job.xml
[2025-06-05 10:42:47] -rw-r--r--. 2 boincer umatlas 226163071 Jun  4 16:05 EVNT.44871834._002936.pool.root.1
[2025-06-05 10:42:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:05 start_atlas.sh
[2025-06-05 10:42:47] drwxrwx--x. 2 boincer umatlas        68 Jun  4 16:05 shared
[2025-06-05 10:42:47] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 16:05 input.tar.gz
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas         0 Jun  4 16:05 boinc_lockfile
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 16:05 pandaJob.out
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas    991007 Jun  4 16:06 agis_schedconf.cvmfs.json
[2025-06-05 10:42:47] drwx------. 4 boincer umatlas      4096 Jun  4 16:06 pilot3
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas      6547 Jun  5 10:40 init_data.xml
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas 202285762 Jun  5 10:41 HITS.44871837._074943.pool.root.1
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas       532 Jun  5 10:41 boinc_task_state.xml
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas      1038 Jun  5 10:41 memory_monitor_summary.json
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas   1598969 Jun  5 10:42 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas    825922 Jun  5 10:42 log.44871837._074943.job.log.tgz.1
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas      7721 Jun  5 10:42 heartbeat.json
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas        95 Jun  5 10:42 pilot_heartbeat.json
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas        29 Jun  5 10:42 wrapper_checkpoint.txt
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  5 10:42 boinc_mmap_file
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas      4489 Jun  5 10:42 pilotlog.txt
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas   4806852 Jun  5 10:42 log.44871837._074943.job.log.1
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas       357 Jun  5 10:42 output.list
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas       620 Jun  5 10:42 runtime_log
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas   5652480 Jun  5 10:42 result.tar.gz
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas       659 Jun  5 10:42 wW3MDmkgIe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBdaKDmSYJC2n.diag
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas      8811 Jun  5 10:42 runtime_log.err
[2025-06-05 10:42:47] -rw-r--r--. 1 boincer umatlas     21275 Jun  5 10:42 stderr.txt
[2025-06-05 10:42:47] HITS file was successfully produced:
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas 202285762 Jun  5 10:41 shared/HITS.pool.root.1
[2025-06-05 10:42:47]  *** Contents of shared directory: ***
[2025-06-05 10:42:47] total 424452
[2025-06-05 10:42:47] -rw-r--r--. 2 boincer umatlas 226163071 Jun  4 16:05 ATLAS.root_0
[2025-06-05 10:42:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:05 start_atlas.sh
[2025-06-05 10:42:47] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 16:05 input.tar.gz
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas 202285762 Jun  5 10:41 HITS.pool.root.1
[2025-06-05 10:42:47] -rw-------. 1 boincer umatlas   5652480 Jun  5 10:42 result.tar.gz
10:42:49 (1345411): run_atlas exited; CPU time 110234.517581
10:42:49 (1345411): called boinc_finish(0)

</stderr_txt>
]]>

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