Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:04:52 (2657148): wrapper (7.7.26015): starting
16:04:52 (2657148): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 16:04:52] Arguments: --nthreads 10
[2025-06-04 16:04:52] Threads: 10
[2025-06-04 16:04:52] Checking for CVMFS
[2025-06-04 16:04:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:04:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:04:53] 2.12.6.0 6643 1793 209056 146792 0 589 26609659 32935937 34081 16776704 0 13782745 99.679 8860152 22368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 16:04:53] CVMFS is ok
[2025-06-04 16:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:04:53] Further information can be found at the LHC@home message board.
[2025-06-04 16:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:04:53] Checking for apptainer binary...
[2025-06-04 16:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:04:53] Running /usr/bin/apptainer --version
[2025-06-04 16:04:53] apptainer version 1.4.1-1.el9
[2025-06-04 16:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:04:53] c-3-40.aglt2.org
[2025-06-04 16:04:53] apptainer works
[2025-06-04 16:04:53] Set ATHENA_PROC_NUMBER=10
[2025-06-04 16:04:53] Set ATHENA_CORE_NUMBER=10
[2025-06-04 16:04:53] Starting ATLAS job with PandaID=6667366109
[2025-06-04 16:04:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:37:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:37:58] 2025-06-05 00:37:42,863 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 20:37:58] 2025-06-05 00:37:42,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667366109/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,864 | INFO     | extracted standard info from prmon json
[2025-06-04 20:37:58] 2025-06-05 00:37:42,864 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:37:58] 2025-06-05 00:37:42,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:37:58] 2025-06-05 00:37:42,865 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:37:58] 2025-06-05 00:37:42,865 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:37:58] 2025-06-05 00:37:42,871 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:37:58] 2025-06-05 00:37:42,872 | INFO     | sum of square deviations: 5902086354.99622
[2025-06-04 20:37:58] 2025-06-05 00:37:42,874 | INFO     | sum of deviations: 69249922297.19849
[2025-06-04 20:37:58] 2025-06-05 00:37:42,874 | INFO     | mean x: 1749075673.0037453
[2025-06-04 20:37:58] 2025-06-05 00:37:42,874 | INFO     | mean y: 2187834.801498127
[2025-06-04 20:37:58] 2025-06-05 00:37:42,874 | INFO     | -- intersect: -20519937251.507423
[2025-06-04 20:37:58] 2025-06-05 00:37:42,874 | INFO     | intersect: -20519937251.507423
[2025-06-04 20:37:58] 2025-06-05 00:37:42,875 | INFO     | chi2: 1.8579426485266008
[2025-06-04 20:37:58] 2025-06-05 00:37:42,875 | INFO     | sum of square deviations: 5576675907.496183
[2025-06-04 20:37:58] 2025-06-05 00:37:42,877 | INFO     | sum of deviations: 70861925548.28242
[2025-06-04 20:37:58] 2025-06-05 00:37:42,877 | INFO     | mean x: 1749075520.5038168
[2025-06-04 20:37:58] 2025-06-05 00:37:42,877 | INFO     | mean y: 2188578.717557252
[2025-06-04 20:37:58] 2025-06-05 00:37:42,878 | INFO     | -- intersect: -22223033286.096294
[2025-06-04 20:37:58] 2025-06-05 00:37:42,878 | INFO     | intersect: -22223033286.096294
[2025-06-04 20:37:58] 2025-06-05 00:37:42,878 | INFO     | chi2: 1.8410432403953716
[2025-06-04 20:37:58] 2025-06-05 00:37:42,878 | INFO     | current chi2=1.8410432403953716 (change=0.9095764147849744 %)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,878 | INFO     | right removable region: 261
[2025-06-04 20:37:58] 2025-06-05 00:37:42,879 | INFO     | sum of square deviations: 5576675297.496183
[2025-06-04 20:37:58] 2025-06-05 00:37:42,882 | INFO     | sum of deviations: 24943615376.702312
[2025-06-04 20:37:58] 2025-06-05 00:37:42,882 | INFO     | mean x: 1749075825.5038168
[2025-06-04 20:37:58] 2025-06-05 00:37:42,882 | INFO     | mean y: 2208473.2977099237
[2025-06-04 20:37:58] 2025-06-05 00:37:42,882 | INFO     | -- intersect: -7821140086.307961
[2025-06-04 20:37:58] 2025-06-05 00:37:42,882 | INFO     | intersect: -7821140086.307961
[2025-06-04 20:37:58] 2025-06-05 00:37:42,883 | INFO     | chi2: 0.1671900235340745
[2025-06-04 20:37:58] 2025-06-05 00:37:42,883 | INFO     | current chi2=0.1671900235340745 (change=91.00133560814373 %)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,883 | INFO     | sum of square deviations: 5263450514.996137
[2025-06-04 20:37:58] 2025-06-05 00:37:42,885 | INFO     | sum of deviations: 18689890750.712063
[2025-06-04 20:37:58] 2025-06-05 00:37:42,885 | INFO     | mean x: 1749075978.003891
[2025-06-04 20:37:58] 2025-06-05 00:37:42,885 | INFO     | mean y: 2211513.287937743
[2025-06-04 20:37:58] 2025-06-05 00:37:42,885 | INFO     | -- intersect: -6208550580.978957
[2025-06-04 20:37:58] 2025-06-05 00:37:42,885 | INFO     | intersect: -6208550580.978957
[2025-06-04 20:37:58] 2025-06-05 00:37:42,885 | INFO     | chi2: 0.10887998799287363
[2025-06-04 20:37:58] 2025-06-05 00:37:42,886 | INFO     | current chi2=0.10887998799287363 (change=34.876504176887615 %)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,886 | INFO     | sum of square deviations: 4962179444.996036
[2025-06-04 20:37:58] 2025-06-05 00:37:42,888 | INFO     | sum of deviations: 13585097925.00003
[2025-06-04 20:37:58] 2025-06-05 00:37:42,888 | INFO     | mean x: 1749076130.5039682
[2025-06-04 20:37:58] 2025-06-05 00:37:42,888 | INFO     | mean y: 2214093.0
[2025-06-04 20:37:58] 2025-06-05 00:37:42,888 | INFO     | -- intersect: -4786280715.493473
[2025-06-04 20:37:58] 2025-06-05 00:37:42,888 | INFO     | intersect: -4786280715.493473
[2025-06-04 20:37:58] 2025-06-05 00:37:42,889 | INFO     | chi2: 0.09577397627021425
[2025-06-04 20:37:58] 2025-06-05 00:37:42,889 | INFO     | current chi2=0.09577397627021425 (change=12.037117163823702 %)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,889 | INFO     | left removable region: 30
[2025-06-04 20:37:58] 2025-06-05 00:37:42,889 | INFO     | sum of square deviations: 3822127752.995676
[2025-06-04 20:37:58] 2025-06-05 00:37:42,890 | INFO     | sum of deviations: 10519026332.77489
[2025-06-04 20:37:58] 2025-06-05 00:37:42,890 | INFO     | mean x: 1749076405.004329
[2025-06-04 20:37:58] 2025-06-05 00:37:42,891 | INFO     | mean y: 2218346.225108225
[2025-06-04 20:37:58] 2025-06-05 00:37:42,891 | INFO     | -- intersect: -4811482804.359272
[2025-06-04 20:37:58] 2025-06-05 00:37:42,891 | INFO     | intersect: -4811482804.359272
[2025-06-04 20:37:58] 2025-06-05 00:37:42,891 | INFO     | chi2: 0.0741746448870473
[2025-06-04 20:37:58] 2025-06-05 00:37:42,891 | INFO     | -- intersect: -4811482804.359272
[2025-06-04 20:37:58] 2025-06-05 00:37:42,891 | INFO     | current memory leak: 2.75 B/s (using 231 data points, chi2=0.07)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,892 | INFO     | ..............................
[2025-06-04 20:37:58] 2025-06-05 00:37:42,892 | INFO     | . Timing measurements:
[2025-06-04 20:37:58] 2025-06-05 00:37:42,892 | INFO     | . get job = 0 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,892 | INFO     | . initial setup = 3 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,893 | INFO     | . payload setup = 15 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,893 | INFO     | . stage-in = 0 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,893 | INFO     | . payload execution = 16295 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,893 | INFO     | . stage-out = 2 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,893 | INFO     | . log creation = 0 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,893 | INFO     | ..............................
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | 
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | job summary report
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | --------------------------------------------------
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | PanDA job id: 6667366109
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | task id: 44871837
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | errors: (none)
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | pilot state: finished 
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | transexitcode: 0
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | exeerrorcode: 0
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | exeerrordiag: 
[2025-06-04 20:37:58] 2025-06-05 00:37:42,987 | INFO     | exitcode: 0
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | exitmsg: OK
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | cpuconsumptiontime: 54126 s
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | nevents: 400
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | neventsw: 0
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | pid: 2681091
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | pgrp: 2681091
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | corecount: 10
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | event service: False
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | sizes: {0: 2397114, 1: 2397369, 9: 2397575, 12: 2397603, 16314: 2429068, 16318: 2438009, 16320: 2438193, 16329: 2438363}
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | --------------------------------------------------
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | 
[2025-06-04 20:37:58] 2025-06-05 00:37:42,988 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 20:37:58] 2025-06-05 00:37:43,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | job 6667366109 has completed (purged errors)
[2025-06-04 20:37:58] 2025-06-05 00:37:43,012 | INFO     | overall cleanup function is called
[2025-06-04 20:37:58] 2025-06-05 00:37:44,020 | INFO     | --- collectZombieJob: --- 10, [2681091]
[2025-06-04 20:37:58] 2025-06-05 00:37:44,021 | INFO     | zombie collector waiting for pid 2681091
[2025-06-04 20:37:58] 2025-06-05 00:37:44,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:37:58] 2025-06-05 00:37:44,022 | INFO     | collected zombie processes
[2025-06-04 20:37:58] 2025-06-05 00:37:44,022 | INFO     | will attempt to kill all subprocesses of pid=2681091
[2025-06-04 20:37:58] 2025-06-05 00:37:44,568 | INFO     | process IDs to be killed: [2681091] (in reverse order)
[2025-06-04 20:37:58] 2025-06-05 00:37:44,722 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:37:58] 2025-06-05 00:37:44,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:37:58] 2025-06-05 00:37:44,743 | INFO     | did not find any defunct processes belonging to 2681091
[2025-06-04 20:37:58] 2025-06-05 00:37:44,762 | INFO     | did not find any defunct processes belonging to 2681091
[2025-06-04 20:37:58] 2025-06-05 00:37:44,763 | INFO     | ready for new job
[2025-06-04 20:37:58] 2025-06-05 00:37:44,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:37:58] 2025-06-05 00:37:44,765 | INFO     | **************************************
[2025-06-04 20:37:58] 2025-06-05 00:37:44,765 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:37:58] 2025-06-05 00:37:44,765 | INFO     | **************************************
[2025-06-04 20:37:58] 2025-06-05 00:37:44,766 | INFO     | 
[2025-06-04 20:37:58] 2025-06-05 00:37:44,783 | INFO     | architecture information:
[2025-06-04 20:37:58] 2025-06-05 00:37:44,783 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:37:58] 2025-06-05 00:37:44,803 | INFO     | cat /etc/os-release:
[2025-06-04 20:37:58] NAME="CentOS Linux"
[2025-06-04 20:37:58] VERSION="7 (Core)"
[2025-06-04 20:37:58] ID="centos"
[2025-06-04 20:37:58] ID_LIKE="rhel fedora"
[2025-06-04 20:37:58] VERSION_ID="7"
[2025-06-04 20:37:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:37:58] ANSI_COLOR="0;31"
[2025-06-04 20:37:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:37:58] HOME_URL="https://www.centos.org/"
[2025-06-04 20:37:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:37:58] 
[2025-06-04 20:37:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:37:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:37:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:37:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:37:58] 
[2025-06-04 20:37:58] 2025-06-05 00:37:44,803 | INFO     | **************************************
[2025-06-04 20:37:58] 2025-06-05 00:37:45,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 20:37:58] 2025-06-05 00:37:45,321 | INFO     | sufficient remaining disk space (76559679488 B)
[2025-06-04 20:37:58] 2025-06-05 00:37:45,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:37:58] 2025-06-05 00:37:45,322 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:37:58] 2025-06-05 00:37:45,322 | INFO     | update_server=False
[2025-06-04 20:37:58] 2025-06-05 00:37:45,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:37:58] 2025-06-05 00:37:45,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:37:58] 2025-06-05 00:37:45,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:37:58] 2025-06-05 00:37:45,323 | INFO     | aborting loop
[2025-06-04 20:37:58] 2025-06-05 00:37:45,951 | INFO     | all data control threads have been joined
[2025-06-04 20:37:58] 2025-06-05 00:37:46,120 | INFO     | all payload control threads have been joined
[2025-06-04 20:37:58] 2025-06-05 00:37:46,310 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:37:58] 2025-06-05 00:37:46,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:37:58] 2025-06-05 00:37:46,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:37:58] 2025-06-05 00:37:46,328 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,330 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,398 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,575 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,602 | INFO     | all job control threads have been joined
[2025-06-04 20:37:58] 2025-06-05 00:37:46,620 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,900 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,902 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:46,956 | INFO     | [data] control thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,011 | INFO     | [job] validate thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,015 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,127 | INFO     | [payload] control thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,329 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,608 | INFO     | [job] control thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:47,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:37:58] 2025-06-05 00:37:48,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:37:58] 2025-06-05 00:37:49,005 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:52,602 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:37:58] 2025-06-05 00:37:52,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123233089344)>', '<ExcThread(monitor, started 140122209109760)>']
[2025-06-04 20:37:58] 2025-06-05 00:37:53,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:37:58] 2025-06-05 00:37:53,352 | INFO     | [monitor] control thread has ended
[2025-06-04 20:37:58] 2025-06-05 00:37:57,967 | INFO     | all workflow threads have been joined
[2025-06-04 20:37:58] 2025-06-05 00:37:57,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:37:58] 2025-06-05 00:37:57,968 | INFO     | traces error code: 0
[2025-06-04 20:37:58] 2025-06-05 00:37:57,968 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:37:58] 2025-06-05 00:37:58,146 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:37:58] 2025-06-05 00:37:58,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:37:58] 2025-06-05 00:37:58,153 [wrapper] pilotpid: 2661423
[2025-06-04 20:37:58] 2025-06-05 00:37:58,156 [wrapper] Pilot exit status: 0
[2025-06-04 20:37:58] 2025-06-05 00:37:58,167 [wrapper] pandaids: 6667366109
[2025-06-04 20:37:58] 2025-06-05 00:37:58,268 [wrapper] cleanup supervisor_pilot    3458 2661424
[2025-06-04 20:37:58] 2025-06-05 00:37:58,272 [wrapper] Test setup, not cleaning
[2025-06-04 20:37:58] 2025-06-05 00:37:58,275 [wrapper] apfmon messages muted
[2025-06-04 20:37:58] 2025-06-05 00:37:58,278 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:37:58] 2025-06-05 00:37:58,281 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:37:58]  *** Error codes and diagnostics ***
[2025-06-04 20:37:58]     "exeErrorCode": 0,
[2025-06-04 20:37:58]     "exeErrorDiag": "",
[2025-06-04 20:37:58]     "pilotErrorCode": 0,
[2025-06-04 20:37:58]     "pilotErrorDiag": "",
[2025-06-04 20:37:58]  *** Listing of results directory ***
[2025-06-04 20:37:58] total 413940
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas    495897 May 27 13:43 pilot3.tar.gz
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas      5111 May 27 13:46 queuedata.json
[2025-06-04 20:37:58] -rwx------. 1 boincer umatlas     37140 May 27 13:49 runpilot2-wrapper.sh
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas       100 Jun  4 16:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:37:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 16:04 run_atlas
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas       105 Jun  4 16:04 job.xml
[2025-06-04 20:37:58] -rw-r--r--. 2 boincer umatlas 222788079 Jun  4 16:04 EVNT.44871834._002798.pool.root.1
[2025-06-04 20:37:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:04 start_atlas.sh
[2025-06-04 20:37:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 16:04 shared
[2025-06-04 20:37:58] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 16:04 input.tar.gz
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas         0 Jun  4 16:04 boinc_lockfile
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 16:04 pandaJob.out
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas    991007 Jun  4 16:05 agis_schedconf.cvmfs.json
[2025-06-04 20:37:58] drwx------. 4 boincer umatlas      4096 Jun  4 16:05 pilot3
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas      6840 Jun  4 20:27 init_data.xml
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas 193606537 Jun  4 20:36 HITS.44871837._071233.pool.root.1
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas       531 Jun  4 20:36 boinc_task_state.xml
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas      1043 Jun  4 20:37 memory_monitor_summary.json
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas   1598969 Jun  4 20:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas    448128 Jun  4 20:37 log.44871837._071233.job.log.tgz.1
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas        95 Jun  4 20:37 pilot_heartbeat.json
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas      7718 Jun  4 20:37 heartbeat.json
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 20:37 boinc_mmap_file
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas        28 Jun  4 20:37 wrapper_checkpoint.txt
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas      4353 Jun  4 20:37 pilotlog.txt
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas   1373587 Jun  4 20:37 log.44871837._071233.job.log.1
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas       357 Jun  4 20:37 output.list
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas       620 Jun  4 20:37 runtime_log
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas   1843200 Jun  4 20:37 result.tar.gz
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas      8652 Jun  4 20:37 runtime_log.err
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas       654 Jun  4 20:37 7SFODmUbDe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDms1ZKDmOacX5n.diag
[2025-06-04 20:37:58] -rw-r--r--. 1 boincer umatlas     20895 Jun  4 20:37 stderr.txt
[2025-06-04 20:37:58] HITS file was successfully produced:
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas 193606537 Jun  4 20:36 shared/HITS.pool.root.1
[2025-06-04 20:37:58]  *** Contents of shared directory: ***
[2025-06-04 20:37:58] total 408960
[2025-06-04 20:37:58] -rw-r--r--. 2 boincer umatlas 222788079 Jun  4 16:04 ATLAS.root_0
[2025-06-04 20:37:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 16:04 start_atlas.sh
[2025-06-04 20:37:58] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 16:04 input.tar.gz
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas 193606537 Jun  4 20:36 HITS.pool.root.1
[2025-06-04 20:37:58] -rw-------. 1 boincer umatlas   1843200 Jun  4 20:37 result.tar.gz
20:37:59 (2657148): run_atlas exited; CPU time 54920.015064
20:37:59 (2657148): called boinc_finish(0)

</stderr_txt>
]]>

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