Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:50:39 (44230): wrapper (7.7.26015): starting
15:50:39 (44230): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:50:39] Arguments: --nthreads 8
[2025-06-04 15:50:39] Threads: 8
[2025-06-04 15:50:39] Checking for CVMFS
[2025-06-04 15:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:50:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:50:39] 2.11.2.0 74184 13136 368760 146792 2 674 11355102 18432001 14598 130560 0 78467243 99.630 57361766 42971 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 15:50:39] CVMFS is ok
[2025-06-04 15:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:50:39] Further information can be found at the LHC@home message board.
[2025-06-04 15:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:50:39] Checking for apptainer binary...
[2025-06-04 15:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:50:39] Running /usr/bin/apptainer --version
[2025-06-04 15:50:39] apptainer version 1.3.2-1.el7
[2025-06-04 15:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:50:40] c-212-13.aglt2.org
[2025-06-04 15:50:40] apptainer works
[2025-06-04 15:50:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:50:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:50:40] Starting ATLAS job with PandaID=6678503742
[2025-06-04 15:50:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:43:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:43:55] 2025-06-04 21:43:38,161 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:43:55] 2025-06-04 21:43:38,162 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678503742/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,162 | INFO     | extracted standard info from prmon json
[2025-06-04 17:43:55] 2025-06-04 21:43:38,162 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:43:55] 2025-06-04 21:43:38,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:43:55] 2025-06-04 21:43:38,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:43:55] 2025-06-04 21:43:38,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:43:55] 2025-06-04 21:43:38,165 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:43:55] 2025-06-04 21:43:38,165 | INFO     | sum of square deviations: 412686807.5
[2025-06-04 17:43:55] 2025-06-04 21:43:38,165 | INFO     | sum of deviations: 2542228619.000001
[2025-06-04 17:43:55] 2025-06-04 21:43:38,165 | INFO     | mean x: 1749069998.5
[2025-06-04 17:43:55] 2025-06-04 21:43:38,165 | INFO     | mean y: 2433502.727272727
[2025-06-04 17:43:55] 2025-06-04 21:43:38,165 | INFO     | -- intersect: -10772167783.312115
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | intersect: -10772167783.312115
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | chi2: 2.043775955138628
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | sum of deviations: 9842482919.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | mean x: 1749069846.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | mean y: 2453419.466666667
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | -- intersect: -47960387013.03987
[2025-06-04 17:43:55] 2025-06-04 21:43:38,166 | INFO     | intersect: -47960387013.03987
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | chi2: 1.170401008557583
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | current chi2=1.170401008557583 (change=42.733399636351265 %)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | sum of deviations: 9400055805.499994
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | mean x: 1749069693.5
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | mean y: 2452037.97
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | -- intersect: -53025219103.05038
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | intersect: -53025219103.05038
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | chi2: 1.1725068945022201
[2025-06-04 17:43:55] 2025-06-04 21:43:38,167 | INFO     | current chi2=1.1725068945022201 (change=-0.17992858253194363 %)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | right removable region: 99
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | sum of square deviations: 358927660.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | sum of deviations: -9805462751.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | mean x: 1749070151.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | mean y: 2467623.8571428573
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | -- intersect: 47784915525.800514
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | intersect: 47784915525.800514
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | chi2: 0.9146022162822379
[2025-06-04 17:43:55] 2025-06-04 21:43:38,168 | INFO     | current chi2=0.9146022162822379 (change=55.249389543767236 %)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | sum of deviations: -9118011508.5
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | mean x: 1749070303.5
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | mean y: 2465458.01
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | -- intersect: 51439083959.3826
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | intersect: 51439083959.3826
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | chi2: 0.9159175933732032
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | current chi2=0.9159175933732032 (change=-0.14381958271566048 %)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | left removable region: 20
[2025-06-04 17:43:55] 2025-06-04 21:43:38,169 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | sum of deviations: -593236529.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | mean x: 1749070273.0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | mean y: 2483925.0126582277
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | -- intersect: 6790534022.865149
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | intersect: 6790534022.865149
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | chi2: 0.003104765488199376
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | -- intersect: 6790534022.865149
[2025-06-04 17:43:55] 2025-06-04 21:43:38,170 | INFO     | current memory leak: -3.88 B/s (using 79 data points, chi2=0.00)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | ..............................
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . Timing measurements:
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . get job = 0 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . initial setup = 2 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . payload setup = 5 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . stage-in = 0 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . payload execution = 6693 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . stage-out = 1 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | . log creation = 0 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,171 | INFO     | ..............................
[2025-06-04 17:43:55] 2025-06-04 21:43:38,618 | INFO     | 
[2025-06-04 17:43:55] 2025-06-04 21:43:38,618 | INFO     | job summary report
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | --------------------------------------------------
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | PanDA job id: 6678503742
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | task id: 45006595
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | errors: (none)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | pilot state: finished 
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | transexitcode: 0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | exeerrorcode: 0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | exeerrordiag: 
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | exitcode: 0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | exitmsg: OK
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | cpuconsumptiontime: 30234 s
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | nevents: 400
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | neventsw: 0
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | pid: 81809
[2025-06-04 17:43:55] 2025-06-04 21:43:38,619 | INFO     | pgrp: 81809
[2025-06-04 17:43:55] 2025-06-04 21:43:38,620 | INFO     | corecount: 8
[2025-06-04 17:43:55] 2025-06-04 21:43:38,620 | INFO     | event service: False
[2025-06-04 17:43:55] 2025-06-04 21:43:38,620 | INFO     | sizes: {0: 2397059, 1: 2397314, 4: 2397520, 12: 2397548, 6702: 2424676, 6704: 2433617, 6707: 2433801, 6754: 2433971}
[2025-06-04 17:43:55] 2025-06-04 21:43:38,620 | INFO     | --------------------------------------------------
[2025-06-04 17:43:55] 2025-06-04 21:43:38,620 | INFO     | 
[2025-06-04 17:43:55] 2025-06-04 21:43:38,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 17:43:55] 2025-06-04 21:43:38,819 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,820 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | job 6678503742 has completed (purged errors)
[2025-06-04 17:43:55] 2025-06-04 21:43:38,821 | INFO     | overall cleanup function is called
[2025-06-04 17:43:55] 2025-06-04 21:43:39,838 | INFO     | --- collectZombieJob: --- 10, [81809]
[2025-06-04 17:43:55] 2025-06-04 21:43:39,838 | INFO     | zombie collector waiting for pid 81809
[2025-06-04 17:43:55] 2025-06-04 21:43:39,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:43:55] 2025-06-04 21:43:39,839 | INFO     | collected zombie processes
[2025-06-04 17:43:55] 2025-06-04 21:43:39,839 | INFO     | will attempt to kill all subprocesses of pid=81809
[2025-06-04 17:43:55] 2025-06-04 21:43:40,356 | INFO     | process IDs to be killed: [81809] (in reverse order)
[2025-06-04 17:43:55] 2025-06-04 21:43:40,863 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:43:55] 2025-06-04 21:43:40,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:43:55] 2025-06-04 21:43:40,885 | INFO     | did not find any defunct processes belonging to 81809
[2025-06-04 17:43:55] 2025-06-04 21:43:40,903 | INFO     | did not find any defunct processes belonging to 81809
[2025-06-04 17:43:55] 2025-06-04 21:43:40,911 | INFO     | ready for new job
[2025-06-04 17:43:55] 2025-06-04 21:43:40,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:43:55] 2025-06-04 21:43:40,913 | INFO     | **************************************
[2025-06-04 17:43:55] 2025-06-04 21:43:40,913 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:43:55] 2025-06-04 21:43:40,913 | INFO     | **************************************
[2025-06-04 17:43:55] 2025-06-04 21:43:40,913 | INFO     | 
[2025-06-04 17:43:55] 2025-06-04 21:43:40,930 | INFO     | architecture information:
[2025-06-04 17:43:55] 2025-06-04 21:43:40,936 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:43:55] 2025-06-04 21:43:41,038 | INFO     | cat /etc/os-release:
[2025-06-04 17:43:55] NAME="CentOS Linux"
[2025-06-04 17:43:55] VERSION="7 (Core)"
[2025-06-04 17:43:55] ID="centos"
[2025-06-04 17:43:55] ID_LIKE="rhel fedora"
[2025-06-04 17:43:55] VERSION_ID="7"
[2025-06-04 17:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:43:55] ANSI_COLOR="0;31"
[2025-06-04 17:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:43:55] HOME_URL="https://www.centos.org/"
[2025-06-04 17:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:43:55] 
[2025-06-04 17:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:43:55] 
[2025-06-04 17:43:55] 2025-06-04 21:43:41,038 | INFO     | **************************************
[2025-06-04 17:43:55] 2025-06-04 21:43:41,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 17:43:55] 2025-06-04 21:43:41,589 | INFO     | sufficient remaining disk space (104874377216 B)
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | INFO     | update_server=False
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:43:55] 2025-06-04 21:43:41,590 | INFO     | aborting loop
[2025-06-04 17:43:55] 2025-06-04 21:43:41,665 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:43:55] 2025-06-04 21:43:41,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:43:55] 2025-06-04 21:43:41,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:43:55] 2025-06-04 21:43:41,730 | INFO     | all data control threads have been joined
[2025-06-04 17:43:55] 2025-06-04 21:43:42,090 | INFO     | all job control threads have been joined
[2025-06-04 17:43:55] 2025-06-04 21:43:42,365 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:43:55] 2025-06-04 21:43:42,596 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,600 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,660 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,736 | INFO     | [data] control thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,749 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,769 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,967 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:42,993 | INFO     | all payload control threads have been joined
[2025-06-04 17:43:55] 2025-06-04 21:43:43,055 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:43,096 | INFO     | [job] control thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:43,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:43:55] 2025-06-04 21:43:43,559 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:43,585 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:43,597 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:43,872 | INFO     | [job] validate thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:43,999 | INFO     | [payload] control thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:44,276 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:46,377 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:43:55] 2025-06-04 21:43:48,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890086438720)>', '<ExcThread(monitor, started 139889408460544)>']
[2025-06-04 17:43:55] 2025-06-04 21:43:48,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:43:55] 2025-06-04 21:43:48,723 | INFO     | [monitor] control thread has ended
[2025-06-04 17:43:55] 2025-06-04 21:43:53,101 | INFO     | all workflow threads have been joined
[2025-06-04 17:43:55] 2025-06-04 21:43:53,102 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:43:55] 2025-06-04 21:43:53,102 | INFO     | traces error code: 0
[2025-06-04 17:43:55] 2025-06-04 21:43:53,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:43:55] 2025-06-04 21:43:53,437 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:43:55] 2025-06-04 21:43:53,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:43:55] 2025-06-04 21:43:53,441 [wrapper] pilotpid: 53956
[2025-06-04 17:43:55] 2025-06-04 21:43:53,443 [wrapper] Pilot exit status: 0
[2025-06-04 17:43:55] 2025-06-04 21:43:53,668 [wrapper] pandaids: 6678503742
[2025-06-04 17:43:55] 2025-06-04 21:43:54,092 [wrapper] cleanup supervisor_pilot 69408 53957
[2025-06-04 17:43:55] 2025-06-04 21:43:54,106 [wrapper] Test setup, not cleaning
[2025-06-04 17:43:55] 2025-06-04 21:43:54,153 [wrapper] apfmon messages muted
[2025-06-04 17:43:55] 2025-06-04 21:43:54,194 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:43:55] 2025-06-04 21:43:54,238 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:43:55]  *** Error codes and diagnostics ***
[2025-06-04 17:43:55]     "exeErrorCode": 0,
[2025-06-04 17:43:55]     "exeErrorDiag": "",
[2025-06-04 17:43:55]     "pilotErrorCode": 0,
[2025-06-04 17:43:55]     "pilotErrorDiag": "",
[2025-06-04 17:43:55]  *** Listing of results directory ***
[2025-06-04 17:43:55] total 382708
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 17:43:55] -rwx------ 1 boincer umatlas     37140 Jun  4 03:46 runpilot2-wrapper.sh
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:46 queuedata.json
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas       100 Jun  4 15:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:43:55] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 15:50 run_atlas
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas       105 Jun  4 15:50 job.xml
[2025-06-04 17:43:55] -rw-r--r-- 2 boincer umatlas 212838253 Jun  4 15:50 EVNT.45006593._000346.pool.root.1
[2025-06-04 17:43:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:50 start_atlas.sh
[2025-06-04 17:43:55] drwxrwx--x 2 boincer umatlas      4096 Jun  4 15:50 shared
[2025-06-04 17:43:55] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 15:50 input.tar.gz
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas         0 Jun  4 15:50 boinc_lockfile
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas      2522 Jun  4 15:50 pandaJob.out
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas    991007 Jun  4 15:50 agis_schedconf.cvmfs.json
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas   1598969 Jun  4 15:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:43:55] drwx------ 4 boincer umatlas      4096 Jun  4 15:50 pilot3
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 17:38 init_data.xml
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas 173297558 Jun  4 17:41 HITS.45006595._055383.pool.root.1
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas       530 Jun  4 17:42 boinc_task_state.xml
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas      1072 Jun  4 17:42 memory_monitor_summary.json
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas    339278 Jun  4 17:42 log.45006595._055383.job.log.tgz.1
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas        95 Jun  4 17:42 pilot_heartbeat.json
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas      7736 Jun  4 17:43 heartbeat.json
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 17:43 boinc_mmap_file
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas        27 Jun  4 17:43 wrapper_checkpoint.txt
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas      4354 Jun  4 17:43 pilotlog.txt
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas    625766 Jun  4 17:43 log.45006595._055383.job.log.1
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas       357 Jun  4 17:43 output.list
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas       620 Jun  4 17:43 runtime_log
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas    983040 Jun  4 17:43 result.tar.gz
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas       658 Jun  4 17:43 ZzvNDmG0xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrinKDmGgI0Hn.diag
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 17:43 runtime_log.err
[2025-06-04 17:43:55] -rw-r--r-- 1 boincer umatlas     20757 Jun  4 17:43 stderr.txt
[2025-06-04 17:43:55] HITS file was successfully produced:
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas 173297558 Jun  4 17:41 shared/HITS.pool.root.1
[2025-06-04 17:43:55]  *** Contents of shared directory: ***
[2025-06-04 17:43:55] total 378568
[2025-06-04 17:43:55] -rw-r--r-- 2 boincer umatlas 212838253 Jun  4 15:50 ATLAS.root_0
[2025-06-04 17:43:55] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:50 start_atlas.sh
[2025-06-04 17:43:55] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 15:50 input.tar.gz
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas 173297558 Jun  4 17:41 HITS.pool.root.1
[2025-06-04 17:43:55] -rw------- 1 boincer umatlas    983040 Jun  4 17:43 result.tar.gz
17:43:56 (44230): run_atlas exited; CPU time 29995.554057
17:43:56 (44230): called boinc_finish(0)

</stderr_txt>
]]>

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