Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:40:22 (6018): wrapper (7.7.26015): starting
15:40:22 (6018): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:40:22] Arguments: --nthreads 8
[2025-06-04 15:40:22] Threads: 8
[2025-06-04 15:40:22] Checking for CVMFS
[2025-06-04 15:40:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:40:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:40:23] 2.11.2.0 2838 35953 73376 146792 0 1 17972932 20275200 1 130560 0 12515089 99.982 6316445 7574 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 15:40:23] CVMFS is ok
[2025-06-04 15:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:40:23] Further information can be found at the LHC@home message board.
[2025-06-04 15:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:40:23] Checking for apptainer binary...
[2025-06-04 15:40:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:40:23] Running /usr/bin/apptainer --version
[2025-06-04 15:40:23] apptainer version 1.3.2-1.el7
[2025-06-04 15:40:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:40:25] c-204-2.aglt2.org
[2025-06-04 15:40:25] apptainer works
[2025-06-04 15:40:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:40:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:40:25] Starting ATLAS job with PandaID=6667101344
[2025-06-04 15:40:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:20:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:20:56] 2025-06-04 22:20:33,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,100 | INFO     | monitor loop #718: job 0:6667101344 is in state 'finished'
[2025-06-04 18:20:56] 2025-06-04 22:20:36,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,373 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 18:20:56] 2025-06-04 22:20:36,374 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667101344/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,375 | INFO     | extracted standard info from prmon json
[2025-06-04 18:20:56] 2025-06-04 22:20:36,375 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:20:56] 2025-06-04 22:20:36,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:20:56] 2025-06-04 22:20:36,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:20:56] 2025-06-04 22:20:36,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:20:56] 2025-06-04 22:20:36,380 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:20:56] 2025-06-04 22:20:36,380 | INFO     | sum of square deviations: 1199940638.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,381 | INFO     | sum of deviations: -454961118.9999987
[2025-06-04 18:20:56] 2025-06-04 22:20:36,382 | INFO     | mean x: 1749070833.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,382 | INFO     | mean y: 2529192.738853503
[2025-06-04 18:20:56] 2025-06-04 22:20:36,382 | INFO     | -- intersect: 665694684.5904094
[2025-06-04 18:20:56] 2025-06-04 22:20:36,382 | INFO     | intersect: 665694684.5904094
[2025-06-04 18:20:56] 2025-06-04 22:20:36,382 | INFO     | chi2: 1.6695288139842681
[2025-06-04 18:20:56] 2025-06-04 22:20:36,383 | INFO     | sum of square deviations: 1088905998.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,383 | INFO     | sum of deviations: -194170808.00000077
[2025-06-04 18:20:56] 2025-06-04 22:20:36,383 | INFO     | mean x: 1749070680.5
[2025-06-04 18:20:56] 2025-06-04 22:20:36,384 | INFO     | mean y: 2529552.7236842103
[2025-06-04 18:20:56] 2025-06-04 22:20:36,384 | INFO     | -- intersect: 314419162.9430929
[2025-06-04 18:20:56] 2025-06-04 22:20:36,384 | INFO     | intersect: 314419162.9430929
[2025-06-04 18:20:56] 2025-06-04 22:20:36,384 | INFO     | chi2: 1.670189373244508
[2025-06-04 18:20:56] 2025-06-04 22:20:36,384 | INFO     | current chi2=1.670189373244508 (change=-0.039565610051579714 %)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,384 | INFO     | right removable region: 151
[2025-06-04 18:20:56] 2025-06-04 22:20:36,385 | INFO     | sum of square deviations: 1088905998.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,385 | INFO     | sum of deviations: -24789877718.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,386 | INFO     | mean x: 1749070985.5
[2025-06-04 18:20:56] 2025-06-04 22:20:36,386 | INFO     | mean y: 2562129.8684210526
[2025-06-04 18:20:56] 2025-06-04 22:20:36,386 | INFO     | -- intersect: 39821661235.103355
[2025-06-04 18:20:56] 2025-06-04 22:20:36,386 | INFO     | intersect: 39821661235.103355
[2025-06-04 18:20:56] 2025-06-04 22:20:36,386 | INFO     | chi2: 0.14830938751538147
[2025-06-04 18:20:56] 2025-06-04 22:20:36,386 | INFO     | current chi2=0.14830938751538147 (change=91.11669195085969 %)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,387 | INFO     | sum of square deviations: 984941258.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,387 | INFO     | sum of deviations: -24074430556.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,387 | INFO     | mean x: 1749071138.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,388 | INFO     | mean y: 2560997.482993197
[2025-06-04 18:20:56] 2025-06-04 22:20:36,388 | INFO     | -- intersect: 42754239137.952255
[2025-06-04 18:20:56] 2025-06-04 22:20:36,388 | INFO     | intersect: 42754239137.952255
[2025-06-04 18:20:56] 2025-06-04 22:20:36,388 | INFO     | chi2: 0.12919083555252164
[2025-06-04 18:20:56] 2025-06-04 22:20:36,388 | INFO     | current chi2=0.12919083555252164 (change=12.890992460525808 %)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,389 | INFO     | left removable region: 20
[2025-06-04 18:20:56] 2025-06-04 22:20:36,389 | INFO     | sum of square deviations: 697054930.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,389 | INFO     | sum of deviations: -14367897788.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,390 | INFO     | mean x: 1749071260.0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,390 | INFO     | mean y: 2547615.4045801526
[2025-06-04 18:20:56] 2025-06-04 22:20:36,390 | INFO     | -- intersect: 36054910214.157555
[2025-06-04 18:20:56] 2025-06-04 22:20:36,390 | INFO     | intersect: 36054910214.157555
[2025-06-04 18:20:56] 2025-06-04 22:20:36,390 | INFO     | chi2: 0.10868293695593566
[2025-06-04 18:20:56] 2025-06-04 22:20:36,390 | INFO     | -- intersect: 36054910214.157555
[2025-06-04 18:20:56] 2025-06-04 22:20:36,391 | INFO     | current memory leak: -20.61 B/s (using 131 data points, chi2=0.11)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,391 | INFO     | ..............................
[2025-06-04 18:20:56] 2025-06-04 22:20:36,391 | INFO     | . Timing measurements:
[2025-06-04 18:20:56] 2025-06-04 22:20:36,391 | INFO     | . get job = 0 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,391 | INFO     | . initial setup = 2 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,391 | INFO     | . payload setup = 11 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,392 | INFO     | . stage-in = 0 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,392 | INFO     | . payload execution = 9551 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,392 | INFO     | . stage-out = 0 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,392 | INFO     | . log creation = 0 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,392 | INFO     | ..............................
[2025-06-04 18:20:56] 2025-06-04 22:20:36,485 | INFO     | 
[2025-06-04 18:20:56] 2025-06-04 22:20:36,485 | INFO     | job summary report
[2025-06-04 18:20:56] 2025-06-04 22:20:36,485 | INFO     | --------------------------------------------------
[2025-06-04 18:20:56] 2025-06-04 22:20:36,485 | INFO     | PanDA job id: 6667101344
[2025-06-04 18:20:56] 2025-06-04 22:20:36,485 | INFO     | task id: 44871837
[2025-06-04 18:20:56] 2025-06-04 22:20:36,486 | INFO     | errors: (none)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:20:56] 2025-06-04 22:20:36,486 | INFO     | pilot state: finished 
[2025-06-04 18:20:56] 2025-06-04 22:20:36,486 | INFO     | transexitcode: 0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,486 | INFO     | exeerrorcode: 0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,486 | INFO     | exeerrordiag: 
[2025-06-04 18:20:56] 2025-06-04 22:20:36,487 | INFO     | exitcode: 0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,487 | INFO     | exitmsg: OK
[2025-06-04 18:20:56] 2025-06-04 22:20:36,487 | INFO     | cpuconsumptiontime: 71993 s
[2025-06-04 18:20:56] 2025-06-04 22:20:36,487 | INFO     | nevents: 400
[2025-06-04 18:20:56] 2025-06-04 22:20:36,487 | INFO     | neventsw: 0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,487 | INFO     | pid: 16260
[2025-06-04 18:20:56] 2025-06-04 22:20:36,488 | INFO     | pgrp: 16260
[2025-06-04 18:20:56] 2025-06-04 22:20:36,488 | INFO     | corecount: 8
[2025-06-04 18:20:56] 2025-06-04 22:20:36,488 | INFO     | event service: False
[2025-06-04 18:20:56] 2025-06-04 22:20:36,488 | INFO     | sizes: {0: 2397169, 1: 2397368, 7: 2397574, 11: 2397602, 9567: 2425833, 9568: 2434774, 9570: 2434958, 9579: 2435128}
[2025-06-04 18:20:56] 2025-06-04 22:20:36,488 | INFO     | --------------------------------------------------
[2025-06-04 18:20:56] 2025-06-04 22:20:36,488 | INFO     | 
[2025-06-04 18:20:56] 2025-06-04 22:20:36,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 18:20:56] 2025-06-04 22:20:36,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,518 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,518 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,519 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:20:56] 2025-06-04 22:20:36,520 | INFO     | job 6667101344 has completed (purged errors)
[2025-06-04 18:20:56] 2025-06-04 22:20:36,520 | INFO     | overall cleanup function is called
[2025-06-04 18:20:56] 2025-06-04 22:20:37,528 | INFO     | --- collectZombieJob: --- 10, [16260]
[2025-06-04 18:20:56] 2025-06-04 22:20:37,528 | INFO     | zombie collector waiting for pid 16260
[2025-06-04 18:20:56] 2025-06-04 22:20:37,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:20:56] 2025-06-04 22:20:37,529 | INFO     | collected zombie processes
[2025-06-04 18:20:56] 2025-06-04 22:20:37,529 | INFO     | will attempt to kill all subprocesses of pid=16260
[2025-06-04 18:20:56] 2025-06-04 22:20:37,601 | INFO     | process IDs to be killed: [16260] (in reverse order)
[2025-06-04 18:20:56] 2025-06-04 22:20:37,655 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:20:56] 2025-06-04 22:20:37,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:20:56] 2025-06-04 22:20:37,659 | INFO     | did not find any defunct processes belonging to 16260
[2025-06-04 18:20:56] 2025-06-04 22:20:37,662 | INFO     | did not find any defunct processes belonging to 16260
[2025-06-04 18:20:56] 2025-06-04 22:20:37,662 | INFO     | ready for new job
[2025-06-04 18:20:56] 2025-06-04 22:20:37,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:20:56] 2025-06-04 22:20:37,664 | INFO     | **************************************
[2025-06-04 18:20:56] 2025-06-04 22:20:37,665 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:20:56] 2025-06-04 22:20:37,665 | INFO     | **************************************
[2025-06-04 18:20:56] 2025-06-04 22:20:37,665 | INFO     | 
[2025-06-04 18:20:56] 2025-06-04 22:20:37,666 | INFO     | architecture information:
[2025-06-04 18:20:56] 2025-06-04 22:20:37,666 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:20:56] 2025-06-04 22:20:37,683 | INFO     | cat /etc/os-release:
[2025-06-04 18:20:56] NAME="CentOS Linux"
[2025-06-04 18:20:56] VERSION="7 (Core)"
[2025-06-04 18:20:56] ID="centos"
[2025-06-04 18:20:56] ID_LIKE="rhel fedora"
[2025-06-04 18:20:56] VERSION_ID="7"
[2025-06-04 18:20:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:20:56] ANSI_COLOR="0;31"
[2025-06-04 18:20:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:20:56] HOME_URL="https://www.centos.org/"
[2025-06-04 18:20:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:20:56] 
[2025-06-04 18:20:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:20:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:20:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:20:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:20:56] 
[2025-06-04 18:20:56] 2025-06-04 22:20:37,683 | INFO     | **************************************
[2025-06-04 18:20:56] 2025-06-04 22:20:37,963 | INFO     | PID=9693 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 18:20:56] 2025-06-04 22:20:38,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 18:20:56] 2025-06-04 22:20:38,205 | INFO     | sufficient remaining disk space (18608029696 B)
[2025-06-04 18:20:56] 2025-06-04 22:20:38,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:20:56] 2025-06-04 22:20:38,206 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:20:56] 2025-06-04 22:20:38,206 | INFO     | update_server=False
[2025-06-04 18:20:56] 2025-06-04 22:20:38,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:20:56] 2025-06-04 22:20:38,206 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:20:56] 2025-06-04 22:20:38,207 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:20:56] 2025-06-04 22:20:38,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:20:56] 2025-06-04 22:20:38,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:20:56] 2025-06-04 22:20:38,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:20:56] 2025-06-04 22:20:38,300 | INFO     | all job control threads have been joined
[2025-06-04 18:20:56] 2025-06-04 22:20:38,501 | INFO     | all data control threads have been joined
[2025-06-04 18:20:56] 2025-06-04 22:20:38,608 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 18:20:56] 2025-06-04 22:20:38,608 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 18:20:56] 2025-06-04 22:20:38,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:20:56] 2025-06-04 22:20:38,608 | INFO     | will abort loop
[2025-06-04 18:20:56] 2025-06-04 22:20:38,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:20:56] 2025-06-04 22:20:38,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:20:56] 2025-06-04 22:20:39,211 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:39,211 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:39,305 | INFO     | [job] control thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:39,504 | INFO     | [data] control thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:39,589 | INFO     | all payload control threads have been joined
[2025-06-04 18:20:56] 2025-06-04 22:20:39,614 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:39,933 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,049 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,289 | INFO     | [job] validate thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,382 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,399 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,547 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,552 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,594 | INFO     | [payload] control thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:40,653 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:42,703 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:48,455 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:20:56] 2025-06-04 22:20:49,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:20:56] 2025-06-04 22:20:50,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723844298560)>', '<ExcThread(monitor, started 139723121088256)>']
[2025-06-04 18:20:56] 2025-06-04 22:20:51,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:20:56] 2025-06-04 22:20:51,251 | INFO     | [monitor] control thread has ended
[2025-06-04 18:20:56] 2025-06-04 22:20:55,919 | INFO     | all workflow threads have been joined
[2025-06-04 18:20:56] 2025-06-04 22:20:55,919 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:20:56] 2025-06-04 22:20:55,920 | INFO     | traces error code: 0
[2025-06-04 18:20:56] 2025-06-04 22:20:55,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:20:56] 2025-06-04 22:20:56,034 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:20:56] 2025-06-04 22:20:56,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:20:56] 2025-06-04 22:20:56,043 [wrapper] pilotpid: 9693
[2025-06-04 18:20:56] 2025-06-04 22:20:56,048 [wrapper] Pilot exit status: 0
[2025-06-04 18:20:56] 2025-06-04 22:20:56,066 [wrapper] pandaids: 6667101344
[2025-06-04 18:20:56] 2025-06-04 22:20:56,109 [wrapper] cleanup supervisor_pilot 31364 9694
[2025-06-04 18:20:56] 2025-06-04 22:20:56,114 [wrapper] Test setup, not cleaning
[2025-06-04 18:20:56] 2025-06-04 22:20:56,118 [wrapper] apfmon messages muted
[2025-06-04 18:20:56] 2025-06-04 22:20:56,122 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:20:56] 2025-06-04 22:20:56,127 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:20:56]  *** Error codes and diagnostics ***
[2025-06-04 18:20:56]     "exeErrorCode": 0,
[2025-06-04 18:20:56]     "exeErrorDiag": "",
[2025-06-04 18:20:56]     "pilotErrorCode": 0,
[2025-06-04 18:20:56]     "pilotErrorDiag": "",
[2025-06-04 18:20:56]  *** Listing of results directory ***
[2025-06-04 18:20:56] total 417736
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas    495897 May 27 09:43 pilot3.tar.gz
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas      5111 May 27 09:45 queuedata.json
[2025-06-04 18:20:56] -rwx------ 1 boincer umatlas     37140 May 27 09:50 runpilot2-wrapper.sh
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas       100 Jun  4 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:20:56] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 15:40 run_atlas
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas       105 Jun  4 15:40 job.xml
[2025-06-04 18:20:56] -rw-r--r-- 2 boincer umatlas 222200197 Jun  4 15:40 EVNT.44871834._001341.pool.root.1
[2025-06-04 18:20:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:40 start_atlas.sh
[2025-06-04 18:20:56] drwxrwx--x 2 boincer umatlas      4096 Jun  4 15:40 shared
[2025-06-04 18:20:56] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 15:40 input.tar.gz
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas         0 Jun  4 15:40 boinc_lockfile
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 15:40 pandaJob.out
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas    991007 Jun  4 15:40 agis_schedconf.cvmfs.json
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas   1598969 Jun  4 15:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:20:56] drwx------ 4 boincer umatlas      4096 Jun  4 15:40 pilot3
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 18:19 init_data.xml
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas 199305337 Jun  4 18:19 HITS.44871837._068304.pool.root.1
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas       529 Jun  4 18:20 boinc_task_state.xml
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas      1048 Jun  4 18:20 memory_monitor_summary.json
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas    339996 Jun  4 18:20 log.44871837._068304.job.log.tgz.1
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 18:20 boinc_mmap_file
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas        27 Jun  4 18:20 wrapper_checkpoint.txt
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas        95 Jun  4 18:20 pilot_heartbeat.json
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas      7748 Jun  4 18:20 heartbeat.json
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas      5050 Jun  4 18:20 pilotlog.txt
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas    871086 Jun  4 18:20 log.44871837._068304.job.log.1
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas       357 Jun  4 18:20 output.list
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas       620 Jun  4 18:20 runtime_log
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas   1228800 Jun  4 18:20 result.tar.gz
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 18:20 runtime_log.err
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas       660 Jun  4 18:20 fKBLDm3r9d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoZZKDm2AhdKm.diag
[2025-06-04 18:20:56] -rw-r--r-- 1 boincer umatlas     21122 Jun  4 18:20 stderr.txt
[2025-06-04 18:20:56] HITS file was successfully produced:
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas 199305337 Jun  4 18:19 shared/HITS.pool.root.1
[2025-06-04 18:20:56]  *** Contents of shared directory: ***
[2025-06-04 18:20:56] total 413352
[2025-06-04 18:20:56] -rw-r--r-- 2 boincer umatlas 222200197 Jun  4 15:40 ATLAS.root_0
[2025-06-04 18:20:56] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:40 start_atlas.sh
[2025-06-04 18:20:56] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 15:40 input.tar.gz
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas 199305337 Jun  4 18:19 HITS.pool.root.1
[2025-06-04 18:20:56] -rw------- 1 boincer umatlas   1228800 Jun  4 18:20 result.tar.gz
18:20:57 (6018): run_atlas exited; CPU time 71918.335095
18:20:57 (6018): called boinc_finish(0)

</stderr_txt>
]]>

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