Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:24:49 (6868): wrapper (7.7.26015): starting
05:24:49 (6868): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 05:24:49] Arguments: --nthreads 8
[2025-06-05 05:24:49] Threads: 8
[2025-06-05 05:24:49] Checking for CVMFS
[2025-06-05 05:24:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:24:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:24:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:24:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:24:51] 2.11.2.0 26890 34093 91632 146804 1 59 13316645 25165824 4296 130560 0 18045846 99.765 20753785 2258 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 05:24:51] CVMFS is ok
[2025-06-05 05:24:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:24:51] Checking for apptainer binary...
[2025-06-05 05:24:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 05:24:51] Running /usr/bin/apptainer --version
[2025-06-05 05:24:51] apptainer version 1.3.2-1.el7
[2025-06-05 05:24:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:55:16] cg-vwn280.simple-grid.lan
[2025-06-05 05:55:16] apptainer works
[2025-06-05 05:55:16] Set ATHENA_PROC_NUMBER=8
[2025-06-05 05:55:16] Set ATHENA_CORE_NUMBER=8
[2025-06-05 05:55:16] Starting ATLAS job with PandaID=6668235285
[2025-06-05 05:55:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:33:14]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:33:14] 2025-06-05 09:17:25,497 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6668235285/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:33:14] 2025-06-05 09:17:25,498 | INFO     | extracted standard info from prmon json
[2025-06-05 11:33:14] 2025-06-05 09:17:25,498 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:33:14] 2025-06-05 09:17:25,498 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:33:14] 2025-06-05 09:17:25,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:33:14] 2025-06-05 09:17:25,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:33:14] 2025-06-05 09:17:25,505 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:33:14] 2025-06-05 09:17:25,506 | INFO     | sum of square deviations: 8797783560.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,509 | INFO     | sum of deviations: 123787932204.00002
[2025-06-05 11:33:14] 2025-06-05 09:17:25,510 | INFO     | mean x: 1749105672.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,510 | INFO     | mean y: 2436309.6163934427
[2025-06-05 11:33:14] 2025-06-05 09:17:25,510 | INFO     | -- intersect: -24608100295.033592
[2025-06-05 11:33:14] 2025-06-05 09:17:25,510 | INFO     | intersect: -24608100295.033592
[2025-06-05 11:33:14] 2025-06-05 09:17:25,510 | INFO     | chi2: 8.158941910016061
[2025-06-05 11:33:14] 2025-06-05 09:17:25,511 | INFO     | sum of square deviations: 8372156975.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,514 | INFO     | sum of deviations: 165487504479.50003
[2025-06-05 11:33:14] 2025-06-05 09:17:25,514 | INFO     | mean x: 1749105519.5
[2025-06-05 11:33:14] 2025-06-05 09:17:25,514 | INFO     | mean y: 2451089.756666667
[2025-06-05 11:33:14] 2025-06-05 09:17:25,514 | INFO     | -- intersect: -34571089320.16553
[2025-06-05 11:33:14] 2025-06-05 09:17:25,514 | INFO     | intersect: -34571089320.16553
[2025-06-05 11:33:14] 2025-06-05 09:17:25,515 | INFO     | chi2: 6.380047002097144
[2025-06-05 11:33:14] 2025-06-05 09:17:25,515 | INFO     | current chi2=6.380047002097144 (change=21.80300984537118 %)
[2025-06-05 11:33:14] 2025-06-05 09:17:25,515 | INFO     | right removable region: 299
[2025-06-05 11:33:14] 2025-06-05 09:17:25,516 | INFO     | sum of square deviations: 8372156975.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,519 | INFO     | sum of deviations: 18116989203.000023
[2025-06-05 11:33:14] 2025-06-05 09:17:25,519 | INFO     | mean x: 1749105824.5
[2025-06-05 11:33:14] 2025-06-05 09:17:25,519 | INFO     | mean y: 2474148.1666666665
[2025-06-05 11:33:14] 2025-06-05 09:17:25,519 | INFO     | -- intersect: -3782515960.3556304
[2025-06-05 11:33:14] 2025-06-05 09:17:25,519 | INFO     | intersect: -3782515960.3556304
[2025-06-05 11:33:14] 2025-06-05 09:17:25,520 | INFO     | chi2: 3.4738865022791456
[2025-06-05 11:33:14] 2025-06-05 09:17:25,520 | INFO     | current chi2=3.4738865022791456 (change=57.42234053640532 %)
[2025-06-05 11:33:14] 2025-06-05 09:17:25,521 | INFO     | sum of square deviations: 7960484140.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,529 | INFO     | sum of deviations: -38144465526.999985
[2025-06-05 11:33:14] 2025-06-05 09:17:25,529 | INFO     | mean x: 1749105977.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,529 | INFO     | mean y: 2494912.786440678
[2025-06-05 11:33:14] 2025-06-05 09:17:25,529 | INFO     | -- intersect: 8383732971.85079
[2025-06-05 11:33:14] 2025-06-05 09:17:25,530 | INFO     | intersect: 8383732971.85079
[2025-06-05 11:33:14] 2025-06-05 09:17:25,530 | INFO     | chi2: 2.0344449822062414
[2025-06-05 11:33:14] 2025-06-05 09:17:25,530 | INFO     | current chi2=2.0344449822062414 (change=41.43605495252986 %)
[2025-06-05 11:33:14] 2025-06-05 09:17:25,531 | INFO     | sum of square deviations: 7562532492.5
[2025-06-05 11:33:14] 2025-06-05 09:17:25,533 | INFO     | sum of deviations: -52189161067.5
[2025-06-05 11:33:14] 2025-06-05 09:17:25,533 | INFO     | mean x: 1749106129.5
[2025-06-05 11:33:14] 2025-06-05 09:17:25,534 | INFO     | mean y: 2500288.2586206896
[2025-06-05 11:33:14] 2025-06-05 09:17:25,534 | INFO     | -- intersect: 12073110445.260471
[2025-06-05 11:33:14] 2025-06-05 09:17:25,534 | INFO     | intersect: 12073110445.260471
[2025-06-05 11:33:14] 2025-06-05 09:17:25,534 | INFO     | chi2: 1.9460425977871325
[2025-06-05 11:33:14] 2025-06-05 09:17:25,534 | INFO     | current chi2=1.9460425977871325 (change=4.345282629527855 %)
[2025-06-05 11:33:14] 2025-06-05 09:17:25,534 | INFO     | left removable region: 30
[2025-06-05 11:33:14] 2025-06-05 09:17:25,535 | INFO     | sum of square deviations: 6035722470.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,537 | INFO     | sum of deviations: -7197440996.000002
[2025-06-05 11:33:14] 2025-06-05 09:17:25,537 | INFO     | mean x: 1749106404.0
[2025-06-05 11:33:14] 2025-06-05 09:17:25,537 | INFO     | mean y: 2515796.07063197
[2025-06-05 11:33:14] 2025-06-05 09:17:25,537 | INFO     | -- intersect: 2088279381.3064754
[2025-06-05 11:33:14] 2025-06-05 09:17:25,538 | INFO     | intersect: 2088279381.3064754
[2025-06-05 11:33:14] 2025-06-05 09:17:25,538 | INFO     | chi2: 0.026496093783914917
[2025-06-05 11:33:14] 2025-06-05 09:17:25,538 | INFO     | -- intersect: 2088279381.3064754
[2025-06-05 11:33:14] 2025-06-05 09:17:25,538 | INFO     | current memory leak: -1.19 B/s (using 269 data points, chi2=0.03)
[2025-06-05 11:33:14] 2025-06-05 09:17:25,539 | INFO     | ..............................
[2025-06-05 11:33:14] 2025-06-05 09:17:25,540 | INFO     | . Timing measurements:
[2025-06-05 11:33:14] 2025-06-05 09:17:25,540 | INFO     | . get job = 0 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,544 | INFO     | . initial setup = 8 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,544 | INFO     | . payload setup = 155 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,544 | INFO     | . stage-in = 0 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,545 | INFO     | . payload execution = 18697 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,545 | INFO     | . stage-out = 4 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,545 | INFO     | . log creation = 1 s
[2025-06-05 11:33:14] 2025-06-05 09:17:25,545 | INFO     | ..............................
[2025-06-05 11:33:14] 2025-06-05 09:17:26,144 | INFO     | 
[2025-06-05 11:33:14] 2025-06-05 09:17:26,144 | INFO     | job summary report
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | --------------------------------------------------
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | PanDA job id: 6668235285
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | task id: 44871837
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | errors: (none)
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | pilot state: finished 
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | transexitcode: 0
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | exeerrorcode: 0
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | exeerrordiag: 
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | exitcode: 0
[2025-06-05 11:33:14] 2025-06-05 09:17:26,145 | INFO     | exitmsg: OK
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | cpuconsumptiontime: 70152 s
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | nevents: 400
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | neventsw: 0
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | pid: 5430
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | pgrp: 5430
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | corecount: 8
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | event service: False
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | sizes: {0: 2397220, 1: 2397419, 12: 2397419, 22: 2397447, 33: 2397475, 44: 2397531, 54: 2397687, 65: 2397715, 76: 2397743, 82: 2398005, 87: 2398061, 18857: 2430163
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | --------------------------------------------------
[2025-06-05 11:33:14] 2025-06-05 09:17:26,146 | INFO     | 
[2025-06-05 11:33:14] 2025-06-05 09:17:26,147 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 11:33:14] 2025-06-05 09:17:26,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:33:14] 2025-06-05 09:17:26,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:33:14] 2025-06-05 09:17:26,762 | INFO     | job 6668235285 has completed (purged errors)
[2025-06-05 11:33:14] 2025-06-05 09:17:26,762 | INFO     | overall cleanup function is called
[2025-06-05 11:33:14] 2025-06-05 09:17:27,772 | INFO     | --- collectZombieJob: --- 10, [5430]
[2025-06-05 11:33:14] 2025-06-05 09:17:27,772 | INFO     | zombie collector waiting for pid 5430
[2025-06-05 11:33:14] 2025-06-05 09:17:27,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:33:14] 2025-06-05 09:17:27,773 | INFO     | collected zombie processes
[2025-06-05 11:33:14] 2025-06-05 09:17:27,773 | INFO     | will attempt to kill all subprocesses of pid=5430
[2025-06-05 11:33:14] 2025-06-05 09:17:27,900 | INFO     | process IDs to be killed: [5430] (in reverse order)
[2025-06-05 11:33:14] 2025-06-05 09:17:28,641 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:33:14] 2025-06-05 09:17:28,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:33:14] 2025-06-05 09:17:28,645 | INFO     | did not find any defunct processes belonging to 5430
[2025-06-05 11:33:14] 2025-06-05 09:17:28,648 | INFO     | did not find any defunct processes belonging to 5430
[2025-06-05 11:33:14] 2025-06-05 09:17:28,648 | INFO     | ready for new job
[2025-06-05 11:33:14] 2025-06-05 09:17:28,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:33:14] 2025-06-05 09:17:28,651 | INFO     | **************************************
[2025-06-05 11:33:14] 2025-06-05 09:17:28,651 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:33:14] 2025-06-05 09:17:28,651 | INFO     | **************************************
[2025-06-05 11:33:14] 2025-06-05 09:17:28,651 | INFO     | 
[2025-06-05 11:33:14] 2025-06-05 09:17:28,652 | INFO     | pilot is running in a VM
[2025-06-05 11:33:14] 2025-06-05 09:17:28,652 | INFO     | architecture information:
[2025-06-05 11:33:14] 2025-06-05 09:17:28,671 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:33:14] 2025-06-05 09:17:28,960 | INFO     | cat /etc/os-release:
[2025-06-05 11:33:14] NAME="CentOS Linux"
[2025-06-05 11:33:14] VERSION="7 (Core)"
[2025-06-05 11:33:14] ID="centos"
[2025-06-05 11:33:14] ID_LIKE="rhel fedora"
[2025-06-05 11:33:14] VERSION_ID="7"
[2025-06-05 11:33:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:33:14] ANSI_COLOR="0;31"
[2025-06-05 11:33:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:33:14] HOME_URL="https://www.centos.org/"
[2025-06-05 11:33:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:33:14] 
[2025-06-05 11:33:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:33:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:33:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:33:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:33:14] 
[2025-06-05 11:33:14] 2025-06-05 09:17:28,960 | INFO     | **************************************
[2025-06-05 11:33:14] 2025-06-05 09:17:29,464 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 11:33:14] 2025-06-05 09:17:29,646 | INFO     | sufficient remaining disk space (496453550080 B)
[2025-06-05 11:33:14] 2025-06-05 09:17:29,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:33:14] 2025-06-05 09:17:29,646 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:33:14] 2025-06-05 09:17:29,646 | INFO     | update_server=False
[2025-06-05 11:33:14] 2025-06-05 09:17:29,647 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:33:14] 2025-06-05 09:17:29,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:33:14] 2025-06-05 09:17:29,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:33:14] 2025-06-05 09:17:29,705 | INFO     | aborting loop
[2025-06-05 11:33:14] 2025-06-05 09:17:29,791 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:33:14] 2025-06-05 09:17:29,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:33:14] 2025-06-05 09:17:29,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:33:14] 2025-06-05 09:17:30,015 | INFO     | all job control threads have been joined
[2025-06-05 11:33:14] 2025-06-05 09:17:30,372 | INFO     | all data control threads have been joined
[2025-06-05 11:33:14] 2025-06-05 09:17:30,422 | INFO     | all payload control threads have been joined
[2025-06-05 11:33:14] 2025-06-05 09:17:30,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:33:14] 2025-06-05 09:17:30,652 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:30,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:33:14] 2025-06-05 09:17:30,710 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:30,902 | INFO     | [job] validate thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,021 | INFO     | [job] control thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,057 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,062 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,378 | INFO     | [data] control thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,428 | INFO     | [payload] control thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,579 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,654 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,702 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,820 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:31,891 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:32,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:32,187 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:34,584 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:33:14] 2025-06-05 09:17:34,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798878861120)>', '<ExcThread(monitor, started 139798148798208)>']
[2025-06-05 11:33:14] 2025-06-05 09:17:35,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:33:14] 2025-06-05 09:17:35,829 | INFO     | [monitor] control thread has ended
[2025-06-05 11:33:14] 2025-06-05 09:17:39,989 | INFO     | all workflow threads have been joined
[2025-06-05 11:33:14] 2025-06-05 09:17:39,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:33:14] 2025-06-05 09:17:39,990 | INFO     | traces error code: 0
[2025-06-05 11:33:14] 2025-06-05 09:17:39,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:33:14] 2025-06-05 09:17:40,374 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:33:14] 2025-06-05 09:17:40,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:33:14] 2025-06-05 09:17:40,571 [wrapper] pilotpid: 29209
[2025-06-05 11:33:14] 2025-06-05 09:17:40,666 [wrapper] Pilot exit status: 0
[2025-06-05 11:33:14] 2025-06-05 09:17:41,099 [wrapper] pandaids: 6668235285
[2025-06-05 11:33:14] 2025-06-05 09:17:42,019 [wrapper] cleanup supervisor_pilot  5674 29210
[2025-06-05 11:33:14] 2025-06-05 09:17:42,123 [wrapper] Test setup, not cleaning
[2025-06-05 11:33:14] 2025-06-05 09:17:42,230 [wrapper] apfmon messages muted
[2025-06-05 11:33:14] 2025-06-05 09:17:42,344 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:33:14] 2025-06-05 09:17:42,472 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:33:14]  *** Error codes and diagnostics ***
[2025-06-05 11:33:14]     "exeErrorCode": 0,
[2025-06-05 11:33:14]     "exeErrorDiag": "",
[2025-06-05 11:33:14]     "pilotErrorCode": 0,
[2025-06-05 11:33:14]     "pilotErrorDiag": "",
[2025-06-05 11:33:14]  *** Listing of results directory ***
[2025-06-05 11:33:14] total 420240
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc    495897 May 28 11:03 pilot3.tar.gz
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc      5111 May 28 11:15 queuedata.json
[2025-06-05 11:33:14] -rwx------. 1 boinc boinc     37140 May 28 11:16 runpilot2-wrapper.sh
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc       100 Jun  5 05:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:33:14] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 05:24 run_atlas
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc       105 Jun  5 05:24 job.xml
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc      6391 Jun  5 05:24 init_data.xml
[2025-06-05 11:33:14] -rw-r--r--. 2 boinc boinc 225815347 Jun  5 05:24 EVNT.44871834._003203.pool.root.1
[2025-06-05 11:33:14] -rw-r--r--. 2 boinc boinc     15093 Jun  5 05:24 start_atlas.sh
[2025-06-05 11:33:14] drwxrwx--x. 2 boinc boinc        68 Jun  5 05:24 shared
[2025-06-05 11:33:14] -rw-r--r--. 2 boinc boinc    508875 Jun  5 05:24 input.tar.gz
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc         0 Jun  5 05:24 boinc_lockfile
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc      2558 Jun  5 05:55 pandaJob.out
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc    987109 Jun  5 05:58 agis_schedconf.cvmfs.json
[2025-06-05 11:33:14] drwx------. 4 boinc boinc      4096 Jun  5 05:58 pilot3
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc 196596503 Jun  5 11:14 HITS.44871837._082017.pool.root.1
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc       531 Jun  5 11:14 boinc_task_state.xml
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc      1015 Jun  5 11:15 memory_monitor_summary.json
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc   1598969 Jun  5 11:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc    427135 Jun  5 11:15 log.44871837._082017.job.log.tgz.1
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc        95 Jun  5 11:17 pilot_heartbeat.json
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc      7690 Jun  5 11:17 heartbeat.json
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc      4416 Jun  5 11:17 pilotlog.txt
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc   1620534 Jun  5 11:17 log.44871837._082017.job.log.1
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc       357 Jun  5 11:17 output.list
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc       620 Jun  5 11:17 runtime_log
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc   2068480 Jun  5 11:17 result.tar.gz
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc      8659 Jun  5 11:17 runtime_log.err
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc       657 Jun  5 11:17 1l1MDmb4Re7n9Rq4apOajLDm4fhM0noT9bVof3QYDmFGTKDm7QVGXn.diag
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc      8192 Jun  5 11:33 boinc_mmap_file
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc        28 Jun  5 11:33 wrapper_checkpoint.txt
[2025-06-05 11:33:14] -rw-r--r--. 1 boinc boinc     20527 Jun  5 11:33 stderr.txt
[2025-06-05 11:33:14] HITS file was successfully produced:
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc 196596503 Jun  5 11:14 shared/HITS.pool.root.1
[2025-06-05 11:33:14]  *** Contents of shared directory: ***
[2025-06-05 11:33:14] total 415052
[2025-06-05 11:33:14] -rw-r--r--. 2 boinc boinc 225815347 Jun  5 05:24 ATLAS.root_0
[2025-06-05 11:33:14] -rw-r--r--. 2 boinc boinc     15093 Jun  5 05:24 start_atlas.sh
[2025-06-05 11:33:14] -rw-r--r--. 2 boinc boinc    508875 Jun  5 05:24 input.tar.gz
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc 196596503 Jun  5 11:14 HITS.pool.root.1
[2025-06-05 11:33:14] -rw-------. 1 boinc boinc   2068480 Jun  5 11:17 result.tar.gz
11:33:16 (6868): run_atlas exited; CPU time 70404.683432
11:33:16 (6868): called boinc_finish(0)

</stderr_txt>
]]>

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