Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:45:07 (2077096): wrapper (7.7.26015): starting
03:45:07 (2077096): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 03:45:07] Arguments: --nthreads 4
[2025-06-06 03:45:07] Threads: 4
[2025-06-06 03:45:07] Checking for CVMFS
[2025-06-06 03:45:07] No cvmfs_config command found, will try listing directly
[2025-06-06 03:45:07] CVMFS is ok
[2025-06-06 03:45:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:45:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 03:45:07] Further information can be found at the LHC@home message board.
[2025-06-06 03:45:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:45:07] Checking for apptainer binary...
[2025-06-06 03:45:07] which: no apptainer in ((null))
[2025-06-06 03:45:07] apptainer is not installed, using version from CVMFS
[2025-06-06 03:45:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:45:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-06 03:45:08] apptainer works
[2025-06-06 03:45:08] Set ATHENA_PROC_NUMBER=4
[2025-06-06 03:45:08] Set ATHENA_CORE_NUMBER=4
[2025-06-06 03:45:08] Starting ATLAS job with PandaID=6677496375
[2025-06-06 03:45:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:09:52]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:09:52]  is_tar=False
[2025-06-06 05:09:52]  lfn=log.45006595._023159.job.log.tgz.1
[2025-06-06 05:09:52]  mtime=0
[2025-06-06 05:09:52]  protocol_id=None
[2025-06-06 05:09:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 05:09:52]  replicas=None
[2025-06-06 05:09:52]  scope=mc23_13p6TeV
[2025-06-06 05:09:52]  status=None
[2025-06-06 05:09:52]  status_code=0
[2025-06-06 05:09:52]  storage_token=
[2025-06-06 05:09:52]  surl=/scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677496375/log.45006595._023159.job.log.tgz.1
[2025-06-06 05:09:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/1a/log.45006595._023159.job.log.tgz.1
[2025-06-06 05:09:52]  workdir=None
[2025-06-06 05:09:52] ]
[2025-06-06 05:09:52] 2025-06-06 03:09:10,513 | INFO     | transferring file log.45006595._023159.job.log.tgz.1 from /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677496375/log.45006595._023159.job.log.tgz.1 to /scratch/b
[2025-06-06 05:09:52] 2025-06-06 03:09:10,513 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677496375/log.45006595._023159.job.log.tgz.1 /scratch/boinc/var/slot80/slots/0/lo
[2025-06-06 05:09:52] 2025-06-06 03:09:10,537 | INFO     | adding to output.list: log.45006595._023159.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/1a/log.45006595._023159.job.log.tg
[2025-06-06 05:09:52] 2025-06-06 03:09:10,538 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 05:09:52] 2025-06-06 03:09:10,538 | INFO     | summary of transferred files:
[2025-06-06 05:09:52] 2025-06-06 03:09:10,538 | INFO     |  -- lfn=log.45006595._023159.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 05:09:52] 2025-06-06 03:09:10,538 | INFO     | stage-out finished correctly
[2025-06-06 05:09:52] 2025-06-06 03:09:10,613 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 05:09:52] 2025-06-06 03:09:11,420 | INFO     | job 6677496375 has state=finished
[2025-06-06 05:09:52] 2025-06-06 03:09:11,420 | INFO     | preparing for final server update for job 6677496375 in state='finished'
[2025-06-06 05:09:52] 2025-06-06 03:09:11,421 | INFO     | this job has now completed (state=finished)
[2025-06-06 05:09:52] 2025-06-06 03:09:11,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 05:09:52] 2025-06-06 03:09:11,421 | INFO     | log transfer has been attempted: DONE
[2025-06-06 05:09:52] 2025-06-06 03:09:11,421 | INFO     | job 6677496375 has finished - writing final server update
[2025-06-06 05:09:52] 2025-06-06 03:09:11,421 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_869649/.job.ad'
[2025-06-06 05:09:52] 2025-06-06 03:09:11,421 | INFO     | total number of processed events: 400 (read)
[2025-06-06 05:09:52] 2025-06-06 03:09:11,427 | INFO     | executing command: lscpu
[2025-06-06 05:09:52] 2025-06-06 03:09:11,522 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:09:52] 2025-06-06 03:09:11,683 | INFO     | monitor loop #365: job 0:6677496375 is in state 'finished'
[2025-06-06 05:09:52] 2025-06-06 03:09:11,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:09:52] 2025-06-06 03:09:14,186 | INFO     | monitor loop #366: job 0:6677496375 is in state 'finished'
[2025-06-06 05:09:52] 2025-06-06 03:09:14,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:09:52] 2025-06-06 03:09:16,689 | INFO     | monitor loop #367: job 0:6677496375 is in state 'finished'
[2025-06-06 05:09:52] 2025-06-06 03:09:16,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:09:52] 2025-06-06 03:09:17,496 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 05:09:52] 2025-06-06 03:09:17,496 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677496375/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:09:52] 2025-06-06 03:09:17,497 | INFO     | extracted standard info from prmon json
[2025-06-06 05:09:52] 2025-06-06 03:09:17,497 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:09:52] 2025-06-06 03:09:17,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:09:52] 2025-06-06 03:09:17,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:09:52] 2025-06-06 03:09:17,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:09:52] 2025-06-06 03:09:17,499 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | sum of square deviations: 130793150.0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | sum of deviations: -3126049004.9999995
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | mean x: 1749176909.0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | mean y: 2348427.3866666667
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | -- intersect: 41808916553.83996
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | intersect: 41808916553.83996
[2025-06-06 05:09:52] 2025-06-06 03:09:17,500 | INFO     | chi2: 0.018199878670628007
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | -- intersect: 41808916553.83996
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | current memory leak: -23.90 B/s (using 75 data points, chi2=0.02)
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | ..............................
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . Timing measurements:
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . get job = 0 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . initial setup = 1 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . payload setup = 7 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . stage-in = 0 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . payload execution = 5004 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . stage-out = 0 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,501 | INFO     | . log creation = 0 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,502 | INFO     | ..............................
[2025-06-06 05:09:52] 2025-06-06 03:09:17,567 | INFO     | 
[2025-06-06 05:09:52] 2025-06-06 03:09:17,567 | INFO     | job summary report
[2025-06-06 05:09:52] 2025-06-06 03:09:17,567 | INFO     | --------------------------------------------------
[2025-06-06 05:09:52] 2025-06-06 03:09:17,567 | INFO     | PanDA job id: 6677496375
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | task id: 45006595
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | errors: (none)
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | pilot state: finished 
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | transexitcode: 0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | exeerrorcode: 0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | exeerrordiag: 
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | exitcode: 0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | exitmsg: OK
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | cpuconsumptiontime: 19111 s
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | nevents: 400
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | neventsw: 0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | pid: 2090685
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | pgrp: 2090685
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | corecount: 4
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | event service: False
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | sizes: {0: 2397122, 1: 2397377, 6: 2397583, 12: 2397611, 5016: 2423855, 5017: 2433002, 5024: 2433116}
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | --------------------------------------------------
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | 
[2025-06-06 05:09:52] 2025-06-06 03:09:17,568 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:09:52] 2025-06-06 03:09:17,590 | INFO     | job 6677496375 has completed (purged errors)
[2025-06-06 05:09:52] 2025-06-06 03:09:17,591 | INFO     | overall cleanup function is called
[2025-06-06 05:09:52] 2025-06-06 03:09:18,599 | INFO     | --- collectZombieJob: --- 10, [2090685]
[2025-06-06 05:09:52] 2025-06-06 03:09:18,599 | INFO     | zombie collector waiting for pid 2090685
[2025-06-06 05:09:52] 2025-06-06 03:09:18,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:09:52] 2025-06-06 03:09:18,599 | INFO     | collected zombie processes
[2025-06-06 05:09:52] 2025-06-06 03:09:18,600 | INFO     | will attempt to kill all subprocesses of pid=2090685
[2025-06-06 05:09:52] 2025-06-06 03:09:19,082 | INFO     | process IDs to be killed: [2090685] (in reverse order)
[2025-06-06 05:09:52] 2025-06-06 03:09:19,255 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:09:52] 2025-06-06 03:09:19,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:09:52] 2025-06-06 03:09:19,277 | INFO     | did not find any defunct processes belonging to 2090685
[2025-06-06 05:09:52] 2025-06-06 03:09:19,293 | INFO     | did not find any defunct processes belonging to 2090685
[2025-06-06 05:09:52] 2025-06-06 03:09:19,294 | INFO     | ready for new job
[2025-06-06 05:09:52] 2025-06-06 03:09:19,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:09:52] 2025-06-06 03:09:19,295 | INFO     | **************************************
[2025-06-06 05:09:52] 2025-06-06 03:09:19,296 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:09:52] 2025-06-06 03:09:19,296 | INFO     | **************************************
[2025-06-06 05:09:52] 2025-06-06 03:09:19,296 | INFO     | 
[2025-06-06 05:09:52] 2025-06-06 03:09:19,302 | INFO     | architecture information:
[2025-06-06 05:09:52] 2025-06-06 03:09:19,303 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:09:52] 2025-06-06 03:09:19,326 | INFO     | cat /etc/os-release:
[2025-06-06 05:09:52] NAME="CentOS Linux"
[2025-06-06 05:09:52] VERSION="7 (Core)"
[2025-06-06 05:09:52] ID="centos"
[2025-06-06 05:09:52] ID_LIKE="rhel fedora"
[2025-06-06 05:09:52] VERSION_ID="7"
[2025-06-06 05:09:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:09:52] ANSI_COLOR="0;31"
[2025-06-06 05:09:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:09:52] HOME_URL="https://www.centos.org/"
[2025-06-06 05:09:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:09:52] 
[2025-06-06 05:09:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:09:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:09:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:09:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:09:52] 
[2025-06-06 05:09:52] 2025-06-06 03:09:19,326 | INFO     | **************************************
[2025-06-06 05:09:52] 2025-06-06 03:09:19,829 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-06 05:09:52] 2025-06-06 03:09:19,853 | INFO     | sufficient remaining disk space (3274846502912 B)
[2025-06-06 05:09:52] 2025-06-06 03:09:19,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:09:52] 2025-06-06 03:09:19,854 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:09:52] 2025-06-06 03:09:19,854 | INFO     | update_server=False
[2025-06-06 05:09:52] 2025-06-06 03:09:19,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:09:52] 2025-06-06 03:09:20,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:09:52] 2025-06-06 03:09:20,196 | INFO     | aborting loop
[2025-06-06 05:09:52] 2025-06-06 03:09:20,448 | INFO     | all data control threads have been joined
[2025-06-06 05:09:52] 2025-06-06 03:09:20,760 | INFO     | all job control threads have been joined
[2025-06-06 05:09:52] 2025-06-06 03:09:20,841 | INFO     | all payload control threads have been joined
[2025-06-06 05:09:52] 2025-06-06 03:09:20,859 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:20,969 | INFO     | [job] validate thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,051 | INFO     | PID=2082175 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 05:09:52] 2025-06-06 03:09:21,051 | INFO     | .. there are 4 such processes running
[2025-06-06 05:09:52] 2025-06-06 03:09:21,051 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:09:52] 2025-06-06 03:09:21,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:09:52] 2025-06-06 03:09:21,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:09:52] 2025-06-06 03:09:21,095 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:09:52] 2025-06-06 03:09:21,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:09:52] 2025-06-06 03:09:21,200 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,212 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,235 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,453 | INFO     | [data] control thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,766 | INFO     | [job] control thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,847 | INFO     | [payload] control thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:21,971 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:22,333 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:22,354 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:22,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:09:52] 2025-06-06 03:09:23,131 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:23,586 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:25,203 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:30,086 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:09:52] 2025-06-06 03:09:31,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:09:52] 2025-06-06 03:09:32,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22991978379072)>', '<ExcThread(monitor, started 22991742142208)>']
[2025-06-06 05:09:52] 2025-06-06 03:09:33,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:09:52] 2025-06-06 03:09:33,112 | INFO     | [monitor] control thread has ended
[2025-06-06 05:09:52] 2025-06-06 03:09:37,853 | INFO     | all workflow threads have been joined
[2025-06-06 05:09:52] 2025-06-06 03:09:37,853 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:09:52] 2025-06-06 03:09:37,853 | INFO     | traces error code: 0
[2025-06-06 05:09:52] 2025-06-06 03:09:37,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:09:52] 2025-06-06 03:09:38,053 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:09:52] 2025-06-06 03:09:38,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:09:52] 2025-06-06 03:09:38,058 [wrapper] pilotpid: 2082175
[2025-06-06 05:09:52] 2025-06-06 03:09:38,060 [wrapper] Pilot exit status: 0
[2025-06-06 05:09:52] 2025-06-06 03:09:38,073 [wrapper] pandaids: 6677496375
[2025-06-06 05:09:52] 2025-06-06 03:09:38,163 [wrapper] cleanup supervisor_pilot 2244063 2082177
[2025-06-06 05:09:52] 2025-06-06 03:09:38,166 [wrapper] Test setup, not cleaning
[2025-06-06 05:09:52] 2025-06-06 03:09:38,170 [wrapper] apfmon messages muted
[2025-06-06 05:09:52] 2025-06-06 03:09:38,172 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:09:52] 2025-06-06 03:09:38,175 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:09:52]  *** Error codes and diagnostics ***
[2025-06-06 05:09:52]     "exeErrorCode": 0,
[2025-06-06 05:09:52]     "exeErrorDiag": "",
[2025-06-06 05:09:52]     "pilotErrorCode": 0,
[2025-06-06 05:09:52]     "pilotErrorDiag": "",
[2025-06-06 05:09:52]  *** Listing of results directory ***
[2025-06-06 05:09:52] total 380480
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc      5111 Jun  3 08:55 queuedata.json
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc    495897 Jun  3 08:55 pilot3.tar.gz
[2025-06-06 05:09:52] -rwx------ 1 boinc boinc     37140 Jun  3 08:56 runpilot2-wrapper.sh
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:09:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:45 run_atlas
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:45 job.xml
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc      6682 Jun  6 03:45 init_data.xml
[2025-06-06 05:09:52] -rw-r--r-- 2 boinc boinc 215268933 Jun  6 03:45 EVNT.45006593._000927.pool.root.1
[2025-06-06 05:09:52] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:45 start_atlas.sh
[2025-06-06 05:09:52] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:45 shared
[2025-06-06 05:09:52] -rw-r--r-- 2 boinc boinc    508876 Jun  6 03:45 input.tar.gz
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:45 boinc_lockfile
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc      2523 Jun  6 03:45 pandaJob.out
[2025-06-06 05:09:52] -rw------- 1 boinc boinc    987721 Jun  6 03:45 agis_schedconf.cvmfs.json
[2025-06-06 05:09:52] -rw------- 1 boinc boinc   1598969 Jun  6 03:45 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:09:52] drwx------ 4 boinc boinc      4096 Jun  6 03:45 pilot3
[2025-06-06 05:09:52] -rw------- 1 boinc boinc        95 Jun  6 05:08 pilot_heartbeat.json
[2025-06-06 05:09:52] -rw------- 1 boinc boinc 169063325 Jun  6 05:08 HITS.45006595._023159.pool.root.1
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc       529 Jun  6 05:08 boinc_task_state.xml
[2025-06-06 05:09:52] -rw------- 1 boinc boinc      1029 Jun  6 05:09 memory_monitor_summary.json
[2025-06-06 05:09:52] -rw------- 1 boinc boinc    234164 Jun  6 05:09 log.45006595._023159.job.log.tgz.1
[2025-06-06 05:09:52] -rw------- 1 boinc boinc      7697 Jun  6 05:09 heartbeat.json
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc        26 Jun  6 05:09 wrapper_checkpoint.txt
[2025-06-06 05:09:52] -rw------- 1 boinc boinc      4831 Jun  6 05:09 pilotlog.txt
[2025-06-06 05:09:52] -rw------- 1 boinc boinc    488836 Jun  6 05:09 log.45006595._023159.job.log.1
[2025-06-06 05:09:52] -rw------- 1 boinc boinc       357 Jun  6 05:09 output.list
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:09 runtime_log
[2025-06-06 05:09:52] -rw------- 1 boinc boinc    737280 Jun  6 05:09 result.tar.gz
[2025-06-06 05:09:52] -rw------- 1 boinc boinc       662 Jun  6 05:09 vAfNDm8kag7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3hXKDmcJNMOo.diag
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc      9025 Jun  6 05:09 runtime_log.err
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:09 boinc_mmap_file
[2025-06-06 05:09:52] -rw-r--r-- 1 boinc boinc     21394 Jun  6 05:09 stderr.txt
[2025-06-06 05:09:52] HITS file was successfully produced:
[2025-06-06 05:09:52] -rw------- 1 boinc boinc 169063325 Jun  6 05:08 shared/HITS.pool.root.1
[2025-06-06 05:09:52]  *** Contents of shared directory: ***
[2025-06-06 05:09:52] total 376572
[2025-06-06 05:09:52] -rw-r--r-- 2 boinc boinc 215268933 Jun  6 03:45 ATLAS.root_0
[2025-06-06 05:09:52] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:45 start_atlas.sh
[2025-06-06 05:09:52] -rw-r--r-- 2 boinc boinc    508876 Jun  6 03:45 input.tar.gz
[2025-06-06 05:09:52] -rw------- 1 boinc boinc 169063325 Jun  6 05:08 HITS.pool.root.1
[2025-06-06 05:09:52] -rw------- 1 boinc boinc    737280 Jun  6 05:09 result.tar.gz
05:09:53 (2077096): run_atlas exited; CPU time 19300.413821
05:09:53 (2077096): called boinc_finish(0)

</stderr_txt>
]]>

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