Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
02:41:14 (2069510): wrapper (7.7.26015): starting
02:41:14 (2069510): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 02:41:14] Arguments: --nthreads 4
[2025-06-06 02:41:14] Threads: 4
[2025-06-06 02:41:14] Checking for CVMFS
[2025-06-06 02:41:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 02:41:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 02:41:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 02:41:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 02:41:15] 2.12.7.0 2709 4673 62156 146837 2 56 5920217 6144000 911 130560 0 5794090 99.991 1218388 5803 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-06-06 02:41:15] CVMFS is ok
[2025-06-06 02:41:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 02:41:15] Checking for apptainer binary...
[2025-06-06 02:41:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-06 02:41:15] Running /usr/bin/apptainer --version
[2025-06-06 02:41:15] apptainer version 1.4.0
[2025-06-06 02:41:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 02:41:15] TS-P310
[2025-06-06 02:41:15] apptainer works
[2025-06-06 02:41:15] Set ATHENA_PROC_NUMBER=4
[2025-06-06 02:41:15] Set ATHENA_CORE_NUMBER=4
[2025-06-06 02:41:15] Starting ATLAS job with PandaID=6667729877
[2025-06-06 02:41:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:37:56]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:37:56] 2025-06-06 03:37:37,083 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6667729877/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,084 | INFO     | extracted standard info from prmon json
[2025-06-06 05:37:56] 2025-06-06 03:37:37,084 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:37:56] 2025-06-06 03:37:37,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:37:56] 2025-06-06 03:37:37,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:37:56] 2025-06-06 03:37:37,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:37:56] 2025-06-06 03:37:37,087 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:37:56] 2025-06-06 03:37:37,088 | INFO     | sum of square deviations: 1605470102.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,089 | INFO     | sum of deviations: -9737352347.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,089 | INFO     | mean x: 1749175747.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,089 | INFO     | mean y: 2401792.38150289
[2025-06-06 05:37:56] 2025-06-06 03:37:37,089 | INFO     | -- intersect: 10611344646.034174
[2025-06-06 05:37:56] 2025-06-06 03:37:37,089 | INFO     | intersect: 10611344646.034174
[2025-06-06 05:37:56] 2025-06-06 03:37:37,090 | INFO     | chi2: 1.4375595898339477
[2025-06-06 05:37:56] 2025-06-06 03:37:37,090 | INFO     | sum of square deviations: 1470248962.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,091 | INFO     | sum of deviations: -9025916331.500002
[2025-06-06 05:37:56] 2025-06-06 03:37:37,091 | INFO     | mean x: 1749175594.5
[2025-06-06 05:37:56] 2025-06-06 03:37:37,091 | INFO     | mean y: 2402594.9464285714
[2025-06-06 05:37:56] 2025-06-06 03:37:37,091 | INFO     | -- intersect: 10740660518.000671
[2025-06-06 05:37:56] 2025-06-06 03:37:37,091 | INFO     | intersect: 10740660518.000671
[2025-06-06 05:37:56] 2025-06-06 03:37:37,092 | INFO     | chi2: 1.4372554700429427
[2025-06-06 05:37:56] 2025-06-06 03:37:37,092 | INFO     | current chi2=1.4372554700429427 (change=0.02115528240746557 %)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,092 | INFO     | right removable region: 167
[2025-06-06 05:37:56] 2025-06-06 03:37:37,092 | INFO     | sum of square deviations: 1470248962.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,093 | INFO     | sum of deviations: -27609111759.499996
[2025-06-06 05:37:56] 2025-06-06 03:37:37,093 | INFO     | mean x: 1749175899.5
[2025-06-06 05:37:56] 2025-06-06 03:37:37,093 | INFO     | mean y: 2421493.363095238
[2025-06-06 05:37:56] 2025-06-06 03:37:37,093 | INFO     | -- intersect: 32849370645.855976
[2025-06-06 05:37:56] 2025-06-06 03:37:37,093 | INFO     | intersect: 32849370645.855976
[2025-06-06 05:37:56] 2025-06-06 03:37:37,093 | INFO     | chi2: 0.12940046586996512
[2025-06-06 05:37:56] 2025-06-06 03:37:37,094 | INFO     | current chi2=0.12940046586996512 (change=90.99860160336642 %)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,094 | INFO     | sum of square deviations: 1342841922.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | sum of deviations: -19626991682.000004
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | mean x: 1749176052.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | mean y: 2411932.7239263803
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | -- intersect: 25568387540.504814
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | intersect: 25568387540.504814
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | chi2: 0.0869038938455639
[2025-06-06 05:37:56] 2025-06-06 03:37:37,095 | INFO     | current chi2=0.0869038938455639 (change=32.84112753280667 %)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,096 | INFO     | sum of square deviations: 1223016419.5
[2025-06-06 05:37:56] 2025-06-06 03:37:37,096 | INFO     | sum of deviations: -14875483759.5
[2025-06-06 05:37:56] 2025-06-06 03:37:37,096 | INFO     | mean x: 1749176204.5
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | mean y: 2405907.14556962
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | -- intersect: 21277543188.770267
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | intersect: 21277543188.770267
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | chi2: 0.07209254183725339
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | current chi2=0.07209254183725339 (change=17.043369811060057 %)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | left removable region: 30
[2025-06-06 05:37:56] 2025-06-06 03:37:37,097 | INFO     | sum of square deviations: 797291228.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,098 | INFO     | sum of deviations: -2939071134.000001
[2025-06-06 05:37:56] 2025-06-06 03:37:37,098 | INFO     | mean x: 1749176479.0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,098 | INFO     | mean y: 2389684.5547445253
[2025-06-06 05:37:56] 2025-06-06 03:37:37,098 | INFO     | -- intersect: 6450415095.03958
[2025-06-06 05:37:56] 2025-06-06 03:37:37,098 | INFO     | intersect: 6450415095.03958
[2025-06-06 05:37:56] 2025-06-06 03:37:37,098 | INFO     | chi2: 0.02930447172643993
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | -- intersect: 6450415095.03958
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | current memory leak: -3.69 B/s (using 137 data points, chi2=0.03)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | ..............................
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | . Timing measurements:
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | . get job = 0 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | . initial setup = 1 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | . payload setup = 3 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | . stage-in = 0 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,099 | INFO     | . payload execution = 10544 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,100 | INFO     | . stage-out = 0 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,100 | INFO     | . log creation = 0 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,100 | INFO     | ..............................
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | 
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | job summary report
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | --------------------------------------------------
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | PanDA job id: 6667729877
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | task id: 44871837
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | errors: (none)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:37:56] 2025-06-06 03:37:37,170 | INFO     | pilot state: finished 
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | transexitcode: 0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | exeerrorcode: 0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | exeerrordiag: 
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | exitcode: 0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | exitmsg: OK
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | cpuconsumptiontime: 40271 s
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | nevents: 400
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | neventsw: 0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | pid: 2079587
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | pgrp: 2079587
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | corecount: 4
[2025-06-06 05:37:56] 2025-06-06 03:37:37,171 | INFO     | event service: False
[2025-06-06 05:37:56] 2025-06-06 03:37:37,172 | INFO     | sizes: {0: 2397172, 1: 2397371, 3: 2397577, 11: 2397605, 10551: 2426467, 10553: 2435410, 10555: 2435594, 10563: 2435764}
[2025-06-06 05:37:56] 2025-06-06 03:37:37,172 | INFO     | --------------------------------------------------
[2025-06-06 05:37:56] 2025-06-06 03:37:37,172 | INFO     | 
[2025-06-06 05:37:56] 2025-06-06 03:37:37,172 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:37:56] 2025-06-06 03:37:37,186 | INFO     | job 6667729877 has completed (purged errors)
[2025-06-06 05:37:56] 2025-06-06 03:37:37,186 | INFO     | overall cleanup function is called
[2025-06-06 05:37:56] 2025-06-06 03:37:38,192 | INFO     | --- collectZombieJob: --- 10, [2079587]
[2025-06-06 05:37:56] 2025-06-06 03:37:38,193 | INFO     | zombie collector waiting for pid 2079587
[2025-06-06 05:37:56] 2025-06-06 03:37:38,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:37:56] 2025-06-06 03:37:38,193 | INFO     | collected zombie processes
[2025-06-06 05:37:56] 2025-06-06 03:37:38,193 | INFO     | will attempt to kill all subprocesses of pid=2079587
[2025-06-06 05:37:56] 2025-06-06 03:37:38,270 | INFO     | process IDs to be killed: [2079587] (in reverse order)
[2025-06-06 05:37:56] 2025-06-06 03:37:38,298 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:37:56] 2025-06-06 03:37:38,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:37:56] 2025-06-06 03:37:38,301 | INFO     | did not find any defunct processes belonging to 2079587
[2025-06-06 05:37:56] 2025-06-06 03:37:38,303 | INFO     | did not find any defunct processes belonging to 2079587
[2025-06-06 05:37:56] 2025-06-06 03:37:38,304 | INFO     | ready for new job
[2025-06-06 05:37:56] 2025-06-06 03:37:38,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:37:56] 2025-06-06 03:37:38,305 | INFO     | **************************************
[2025-06-06 05:37:56] 2025-06-06 03:37:38,305 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:37:56] 2025-06-06 03:37:38,305 | INFO     | **************************************
[2025-06-06 05:37:56] 2025-06-06 03:37:38,305 | INFO     | 
[2025-06-06 05:37:56] 2025-06-06 03:37:38,306 | INFO     | architecture information:
[2025-06-06 05:37:56] 2025-06-06 03:37:38,306 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:37:56] 2025-06-06 03:37:38,314 | INFO     | cat /etc/os-release:
[2025-06-06 05:37:56] NAME="CentOS Linux"
[2025-06-06 05:37:56] VERSION="7 (Core)"
[2025-06-06 05:37:56] ID="centos"
[2025-06-06 05:37:56] ID_LIKE="rhel fedora"
[2025-06-06 05:37:56] VERSION_ID="7"
[2025-06-06 05:37:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:37:56] ANSI_COLOR="0;31"
[2025-06-06 05:37:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:37:56] HOME_URL="https://www.centos.org/"
[2025-06-06 05:37:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:37:56] 
[2025-06-06 05:37:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:37:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:37:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:37:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:37:56] 
[2025-06-06 05:37:56] 2025-06-06 03:37:38,315 | INFO     | **************************************
[2025-06-06 05:37:56] 2025-06-06 03:37:38,818 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-06 05:37:56] 2025-06-06 03:37:38,827 | INFO     | sufficient remaining disk space (90416611328 B)
[2025-06-06 05:37:56] 2025-06-06 03:37:38,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:37:56] 2025-06-06 03:37:38,827 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:37:56] 2025-06-06 03:37:38,828 | INFO     | update_server=False
[2025-06-06 05:37:56] 2025-06-06 03:37:38,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:37:56] 2025-06-06 03:37:38,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:37:56] 2025-06-06 03:37:38,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:37:56] 2025-06-06 03:37:39,393 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:37:56] 2025-06-06 03:37:39,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:37:56] 2025-06-06 03:37:39,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:37:56] 2025-06-06 03:37:39,589 | INFO     | all data control threads have been joined
[2025-06-06 05:37:56] 2025-06-06 03:37:39,679 | INFO     | all payload control threads have been joined
[2025-06-06 05:37:56] 2025-06-06 03:37:39,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:37:56] 2025-06-06 03:37:39,759 | INFO     | aborting loop
[2025-06-06 05:37:56] 2025-06-06 03:37:39,833 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:39,833 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:39,973 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,231 | INFO     | all job control threads have been joined
[2025-06-06 05:37:56] 2025-06-06 03:37:40,344 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:37:56] 2025-06-06 03:37:40,593 | INFO     | [data] control thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,606 | INFO     | [job] validate thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,684 | INFO     | [payload] control thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,708 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,762 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,833 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,953 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:40,996 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:41,236 | INFO     | [job] control thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:41,246 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:44,471 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:49,816 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:37:56] 2025-06-06 03:37:50,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:37:56] 2025-06-06 03:37:51,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126950973716288)>', '<ExcThread(monitor, started 126950106461952)>']
[2025-06-06 05:37:56] 2025-06-06 03:37:51,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:37:56] 2025-06-06 03:37:51,433 | INFO     | [monitor] control thread has ended
[2025-06-06 05:37:56] 2025-06-06 03:37:56,412 | INFO     | all workflow threads have been joined
[2025-06-06 05:37:56] 2025-06-06 03:37:56,413 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:37:56] 2025-06-06 03:37:56,413 | INFO     | traces error code: 0
[2025-06-06 05:37:56] 2025-06-06 03:37:56,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:37:56] 2025-06-06 03:37:56,493 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:37:56] 2025-06-06 03:37:56,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:37:56] 2025-06-06 03:37:56,496 [wrapper] pilotpid: 2073125
[2025-06-06 05:37:56] 2025-06-06 03:37:56,498 [wrapper] Pilot exit status: 0
[2025-06-06 05:37:56] 2025-06-06 03:37:56,509 [wrapper] pandaids: 6667729877
[2025-06-06 05:37:56] 2025-06-06 03:37:56,529 [wrapper] cleanup supervisor_pilot 2131436 2073126
[2025-06-06 05:37:56] 2025-06-06 03:37:56,531 [wrapper] Test setup, not cleaning
[2025-06-06 05:37:56] 2025-06-06 03:37:56,533 [wrapper] apfmon messages muted
[2025-06-06 05:37:56] 2025-06-06 03:37:56,535 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:37:56] 2025-06-06 03:37:56,537 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:37:56]  *** Error codes and diagnostics ***
[2025-06-06 05:37:56]     "exeErrorCode": 0,
[2025-06-06 05:37:56]     "exeErrorDiag": "",
[2025-06-06 05:37:56]     "pilotErrorCode": 0,
[2025-06-06 05:37:56]     "pilotErrorDiag": "",
[2025-06-06 05:37:56]  *** Listing of results directory ***
[2025-06-06 05:37:56] insgesamt 419016
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc    495897 28. Mai 00:42 pilot3.tar.gz
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc      5111 28. Mai 01:01 queuedata.json
[2025-06-06 05:37:56] -rwx------ 1 boinc boinc     37140 28. Mai 01:02 runpilot2-wrapper.sh
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc       100  6. Jun 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:37:56] -rwxr-xr-x 1 boinc boinc      7986  6. Jun 02:41 run_atlas
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc       105  6. Jun 02:41 job.xml
[2025-06-06 05:37:56] -rw-r--r-- 2 boinc boinc     15093  6. Jun 02:41 start_atlas.sh
[2025-06-06 05:37:56] drwxrwx--x 2 boinc boinc      4096  6. Jun 02:41 shared
[2025-06-06 05:37:56] -rw-r--r-- 2 boinc boinc    508889  6. Jun 02:41 input.tar.gz
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc      6708  6. Jun 02:41 init_data.xml
[2025-06-06 05:37:56] -rw-r--r-- 2 boinc boinc 224945679  6. Jun 02:41 EVNT.44871834._001423.pool.root.1
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc         0  6. Jun 02:41 boinc_lockfile
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc      2559  6. Jun 02:41 pandaJob.out
[2025-06-06 05:37:56] -rw------- 1 boinc boinc    987721  6. Jun 02:41 agis_schedconf.cvmfs.json
[2025-06-06 05:37:56] -rw------- 1 boinc boinc   1598969  6. Jun 02:41 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:37:56] drwx------ 4 boinc boinc      4096  6. Jun 02:41 pilot3
[2025-06-06 05:37:56] -rw------- 1 boinc boinc        95  6. Jun 05:36 pilot_heartbeat.json
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc       530  6. Jun 05:36 boinc_task_state.xml
[2025-06-06 05:37:56] -rw------- 1 boinc boinc 197689112  6. Jun 05:36 HITS.44871837._074689.pool.root.1
[2025-06-06 05:37:56] -rw------- 1 boinc boinc      1020  6. Jun 05:37 memory_monitor_summary.json
[2025-06-06 05:37:56] -rw------- 1 boinc boinc    298891  6. Jun 05:37 log.44871837._074689.job.log.tgz.1
[2025-06-06 05:37:56] -rw------- 1 boinc boinc      7655  6. Jun 05:37 heartbeat.json
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc      8192  6. Jun 05:37 boinc_mmap_file
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc        28  6. Jun 05:37 wrapper_checkpoint.txt
[2025-06-06 05:37:56] -rw------- 1 boinc boinc      4426  6. Jun 05:37 pilotlog.txt
[2025-06-06 05:37:56] -rw------- 1 boinc boinc   1005506  6. Jun 05:37 log.44871837._074689.job.log.1
[2025-06-06 05:37:56] -rw------- 1 boinc boinc       357  6. Jun 05:37 output.list
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc       620  6. Jun 05:37 runtime_log
[2025-06-06 05:37:56] -rw------- 1 boinc boinc   1320960  6. Jun 05:37 result.tar.gz
[2025-06-06 05:37:56] -rw------- 1 boinc boinc       647  6. Jun 05:37 ZjXNDmPUIe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWaaKDmPZ2Xfn.diag
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc      8642  6. Jun 05:37 runtime_log.err
[2025-06-06 05:37:56] -rw-r--r-- 1 boinc boinc     20497  6. Jun 05:37 stderr.txt
[2025-06-06 05:37:56] HITS file was successfully produced:
[2025-06-06 05:37:56] -rw------- 1 boinc boinc 197689112  6. Jun 05:36 shared/HITS.pool.root.1
[2025-06-06 05:37:56]  *** Contents of shared directory: ***
[2025-06-06 05:37:56] insgesamt 414544
[2025-06-06 05:37:56] -rw-r--r-- 2 boinc boinc     15093  6. Jun 02:41 start_atlas.sh
[2025-06-06 05:37:56] -rw-r--r-- 2 boinc boinc    508889  6. Jun 02:41 input.tar.gz
[2025-06-06 05:37:56] -rw-r--r-- 2 boinc boinc 224945679  6. Jun 02:41 ATLAS.root_0
[2025-06-06 05:37:56] -rw------- 1 boinc boinc 197689112  6. Jun 05:36 HITS.pool.root.1
[2025-06-06 05:37:56] -rw------- 1 boinc boinc   1320960  6. Jun 05:37 result.tar.gz
05:37:57 (2069510): run_atlas exited; CPU time 40371.662487
05:37:57 (2069510): called boinc_finish(0)

</stderr_txt>
]]>

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