Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:18:53 (3902): wrapper (7.7.26015): starting
15:18:53 (3902): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 15:18:53] Arguments: --nthreads 12
[2025-06-04 15:18:53] Threads: 12
[2025-06-04 15:18:53] Checking for CVMFS
[2025-06-04 15:18:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:18:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:18:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:18:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:18:53] 2.11.2.0 3081 36045 89280 146792 4 1 18631113 20275201 1 130560 0 16136793 99.983 6360222 7600 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 15:18:53] CVMFS is ok
[2025-06-04 15:18:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:18:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:18:53] Further information can be found at the LHC@home message board.
[2025-06-04 15:18:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:18:53] Checking for apptainer binary...
[2025-06-04 15:18:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:18:53] Running /usr/bin/apptainer --version
[2025-06-04 15:18:53] apptainer version 1.3.2-1.el7
[2025-06-04 15:18:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:18:55] c-205-29.aglt2.org
[2025-06-04 15:18:55] apptainer works
[2025-06-04 15:18:55] Set ATHENA_PROC_NUMBER=12
[2025-06-04 15:18:55] Set ATHENA_CORE_NUMBER=12
[2025-06-04 15:18:55] Starting ATLAS job with PandaID=6667435352
[2025-06-04 15:18:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:51:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:51:39]  mtime=0
[2025-06-04 16:51:39]  protocol_id=None
[2025-06-04 16:51:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:51:39]  replicas=None
[2025-06-04 16:51:39]  scope=mc23_13p6TeV
[2025-06-04 16:51:39]  status=None
[2025-06-04 16:51:39]  status_code=0
[2025-06-04 16:51:39]  storage_token=
[2025-06-04 16:51:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667435352/log.44871837._072309.job.log.tgz.1
[2025-06-04 16:51:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/04/log.44871837._072309.job.log.tgz.1
[2025-06-04 16:51:39]  workdir=None
[2025-06-04 16:51:39] ]
[2025-06-04 16:51:39] 2025-06-04 20:51:11,496 | INFO     | transferring file log.44871837._072309.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667435352/log.44871837._072309.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 16:51:39] 2025-06-04 20:51:11,496 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667435352/log.44871837._072309.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._072309.job
[2025-06-04 16:51:39] 2025-06-04 20:51:11,517 | INFO     | adding to output.list: log.44871837._072309.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/55/04/log.44871837._072309.job.log.tg
[2025-06-04 16:51:39] 2025-06-04 20:51:11,518 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:51:39] 2025-06-04 20:51:11,518 | INFO     | summary of transferred files:
[2025-06-04 16:51:39] 2025-06-04 20:51:11,518 | INFO     |  -- lfn=log.44871837._072309.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:51:39] 2025-06-04 20:51:11,518 | INFO     | stage-out finished correctly
[2025-06-04 16:51:39] 2025-06-04 20:51:12,195 | INFO     | monitor loop #411: job 0:6667435352 is in state 'finished'
[2025-06-04 16:51:39] 2025-06-04 20:51:12,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:51:39] 2025-06-04 20:51:12,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:51:39] 2025-06-04 20:51:14,699 | INFO     | monitor loop #412: job 0:6667435352 is in state 'finished'
[2025-06-04 16:51:39] 2025-06-04 20:51:14,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:51:39] 2025-06-04 20:51:15,339 | INFO     | job 6667435352 has state=finished
[2025-06-04 16:51:39] 2025-06-04 20:51:15,339 | INFO     | preparing for final server update for job 6667435352 in state='finished'
[2025-06-04 16:51:39] 2025-06-04 20:51:15,339 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:51:39] 2025-06-04 20:51:15,340 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:51:39] 2025-06-04 20:51:15,340 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:51:39] 2025-06-04 20:51:15,340 | INFO     | job 6667435352 has finished - writing final server update
[2025-06-04 16:51:39] 2025-06-04 20:51:15,340 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:51:39] 2025-06-04 20:51:15,341 | INFO     | executing command: lscpu
[2025-06-04 16:51:39] 2025-06-04 20:51:15,369 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:51:39] 2025-06-04 20:51:17,202 | INFO     | monitor loop #413: job 0:6667435352 is in state 'finished'
[2025-06-04 16:51:39] 2025-06-04 20:51:17,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:51:39] 2025-06-04 20:51:18,400 | INFO     | PID=7903 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 16:51:39] 2025-06-04 20:51:19,709 | INFO     | monitor loop #414: job 0:6667435352 is in state 'finished'
[2025-06-04 16:51:39] 2025-06-04 20:51:19,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:51:39] 2025-06-04 20:51:19,881 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 16:51:39] 2025-06-04 20:51:19,882 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667435352/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:51:39] 2025-06-04 20:51:19,883 | INFO     | extracted standard info from prmon json
[2025-06-04 16:51:39] 2025-06-04 20:51:19,883 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:51:39] 2025-06-04 20:51:19,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:51:39] 2025-06-04 20:51:19,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:51:39] 2025-06-04 20:51:19,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:51:39] 2025-06-04 20:51:19,886 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:51:39] 2025-06-04 20:51:19,886 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 16:51:39] 2025-06-04 20:51:19,887 | INFO     | sum of deviations: -11292267540.0
[2025-06-04 16:51:39] 2025-06-04 20:51:19,887 | INFO     | mean x: 1749067587.0
[2025-06-04 16:51:39] 2025-06-04 20:51:19,887 | INFO     | mean y: 2847777.8192771086
[2025-06-04 16:51:39] 2025-06-04 20:51:19,887 | INFO     | -- intersect: 111416419184.82108
[2025-06-04 16:51:39] 2025-06-04 20:51:19,887 | INFO     | intersect: 111416419184.82108
[2025-06-04 16:51:39] 2025-06-04 20:51:19,888 | INFO     | chi2: 0.11397105812453881
[2025-06-04 16:51:39] 2025-06-04 20:51:19,888 | INFO     | -- intersect: 111416419184.82108
[2025-06-04 16:51:39] 2025-06-04 20:51:19,888 | INFO     | current memory leak: -63.70 B/s (using 83 data points, chi2=0.11)
[2025-06-04 16:51:39] 2025-06-04 20:51:19,888 | INFO     | ..............................
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . Timing measurements:
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . get job = 0 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . initial setup = 2 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . payload setup = 9 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . stage-in = 0 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . payload execution = 5491 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . stage-out = 0 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | . log creation = 0 s
[2025-06-04 16:51:39] 2025-06-04 20:51:19,889 | INFO     | ..............................
[2025-06-04 16:51:39] 2025-06-04 20:51:20,166 | INFO     | 
[2025-06-04 16:51:39] 2025-06-04 20:51:20,166 | INFO     | job summary report
[2025-06-04 16:51:39] 2025-06-04 20:51:20,166 | INFO     | --------------------------------------------------
[2025-06-04 16:51:39] 2025-06-04 20:51:20,167 | INFO     | PanDA job id: 6667435352
[2025-06-04 16:51:39] 2025-06-04 20:51:20,167 | INFO     | task id: 44871837
[2025-06-04 16:51:39] 2025-06-04 20:51:20,167 | INFO     | errors: (none)
[2025-06-04 16:51:39] 2025-06-04 20:51:20,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:51:39] 2025-06-04 20:51:20,167 | INFO     | pilot state: finished 
[2025-06-04 16:51:39] 2025-06-04 20:51:20,167 | INFO     | transexitcode: 0
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | exeerrorcode: 0
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | exeerrordiag: 
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | exitcode: 0
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | exitmsg: OK
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | cpuconsumptiontime: 60834 s
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | nevents: 400
[2025-06-04 16:51:39] 2025-06-04 20:51:20,168 | INFO     | neventsw: 0
[2025-06-04 16:51:39] 2025-06-04 20:51:20,169 | INFO     | pid: 14329
[2025-06-04 16:51:39] 2025-06-04 20:51:20,169 | INFO     | pgrp: 14329
[2025-06-04 16:51:39] 2025-06-04 20:51:20,169 | INFO     | corecount: 12
[2025-06-04 16:51:39] 2025-06-04 20:51:20,169 | INFO     | event service: False
[2025-06-04 16:51:39] 2025-06-04 20:51:20,169 | INFO     | sizes: {0: 2397219, 1: 2397418, 6: 2397624, 12: 2397652, 5504: 2424103, 5506: 2433044, 5507: 2433228, 5514: 2433398}
[2025-06-04 16:51:39] 2025-06-04 20:51:20,169 | INFO     | --------------------------------------------------
[2025-06-04 16:51:39] 2025-06-04 20:51:20,170 | INFO     | 
[2025-06-04 16:51:39] 2025-06-04 20:51:20,170 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 16:51:39] 2025-06-04 20:51:20,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,194 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,194 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:51:39] 2025-06-04 20:51:20,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:51:39] 2025-06-04 20:51:20,196 | INFO     | job 6667435352 has completed (purged errors)
[2025-06-04 16:51:39] 2025-06-04 20:51:20,196 | INFO     | overall cleanup function is called
[2025-06-04 16:51:39] 2025-06-04 20:51:21,204 | INFO     | --- collectZombieJob: --- 10, [14329]
[2025-06-04 16:51:39] 2025-06-04 20:51:21,204 | INFO     | zombie collector waiting for pid 14329
[2025-06-04 16:51:39] 2025-06-04 20:51:21,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:51:39] 2025-06-04 20:51:21,204 | INFO     | collected zombie processes
[2025-06-04 16:51:39] 2025-06-04 20:51:21,205 | INFO     | will attempt to kill all subprocesses of pid=14329
[2025-06-04 16:51:39] 2025-06-04 20:51:21,295 | INFO     | process IDs to be killed: [14329] (in reverse order)
[2025-06-04 16:51:39] 2025-06-04 20:51:21,345 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:51:39] 2025-06-04 20:51:21,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:51:39] 2025-06-04 20:51:21,348 | INFO     | did not find any defunct processes belonging to 14329
[2025-06-04 16:51:39] 2025-06-04 20:51:21,350 | INFO     | did not find any defunct processes belonging to 14329
[2025-06-04 16:51:39] 2025-06-04 20:51:21,350 | INFO     | ready for new job
[2025-06-04 16:51:39] 2025-06-04 20:51:21,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:51:39] 2025-06-04 20:51:21,352 | INFO     | **************************************
[2025-06-04 16:51:39] 2025-06-04 20:51:21,352 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:51:39] 2025-06-04 20:51:21,352 | INFO     | **************************************
[2025-06-04 16:51:39] 2025-06-04 20:51:21,352 | INFO     | 
[2025-06-04 16:51:39] 2025-06-04 20:51:21,353 | INFO     | architecture information:
[2025-06-04 16:51:39] 2025-06-04 20:51:21,353 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:51:39] 2025-06-04 20:51:21,368 | INFO     | cat /etc/os-release:
[2025-06-04 16:51:39] NAME="CentOS Linux"
[2025-06-04 16:51:39] VERSION="7 (Core)"
[2025-06-04 16:51:39] ID="centos"
[2025-06-04 16:51:39] ID_LIKE="rhel fedora"
[2025-06-04 16:51:39] VERSION_ID="7"
[2025-06-04 16:51:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:51:39] ANSI_COLOR="0;31"
[2025-06-04 16:51:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:51:39] HOME_URL="https://www.centos.org/"
[2025-06-04 16:51:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:51:39] 
[2025-06-04 16:51:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:51:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:51:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:51:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:51:39] 
[2025-06-04 16:51:39] 2025-06-04 20:51:21,368 | INFO     | **************************************
[2025-06-04 16:51:39] 2025-06-04 20:51:21,871 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 16:51:39] 2025-06-04 20:51:21,887 | INFO     | sufficient remaining disk space (29381099520 B)
[2025-06-04 16:51:39] 2025-06-04 20:51:21,888 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:51:39] 2025-06-04 20:51:21,888 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:51:39] 2025-06-04 20:51:21,888 | INFO     | update_server=False
[2025-06-04 16:51:39] 2025-06-04 20:51:21,888 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:51:39] 2025-06-04 20:51:21,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:51:39] 2025-06-04 20:51:21,980 | INFO     | all payload control threads have been joined
[2025-06-04 16:51:39] 2025-06-04 20:51:21,989 | INFO     | all job control threads have been joined
[2025-06-04 16:51:39] 2025-06-04 20:51:22,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:51:39] 2025-06-04 20:51:22,212 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 16:51:39] 2025-06-04 20:51:22,221 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 16:51:39] 2025-06-04 20:51:22,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:51:39] 2025-06-04 20:51:22,222 | INFO     | will abort loop
[2025-06-04 16:51:39] 2025-06-04 20:51:22,412 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:51:39] 2025-06-04 20:51:22,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:51:39] 2025-06-04 20:51:22,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:51:39] 2025-06-04 20:51:22,893 | INFO     | all data control threads have been joined
[2025-06-04 16:51:39] 2025-06-04 20:51:22,894 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:22,894 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:22,970 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:22,985 | INFO     | [payload] control thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:22,994 | INFO     | [job] control thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:23,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:51:39] 2025-06-04 20:51:23,155 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:23,227 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:23,341 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:23,343 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:23,856 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:23,898 | INFO     | [data] control thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:24,094 | INFO     | [job] validate thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:24,124 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:24,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:27,047 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:32,248 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:51:39] 2025-06-04 20:51:33,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:51:39] 2025-06-04 20:51:34,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139992535590720)>', '<ExcThread(monitor, started 139991925626624)>']
[2025-06-04 16:51:39] 2025-06-04 20:51:34,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:51:39] 2025-06-04 20:51:34,474 | INFO     | [monitor] control thread has ended
[2025-06-04 16:51:39] 2025-06-04 20:51:39,156 | INFO     | all workflow threads have been joined
[2025-06-04 16:51:39] 2025-06-04 20:51:39,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:51:39] 2025-06-04 20:51:39,157 | INFO     | traces error code: 0
[2025-06-04 16:51:39] 2025-06-04 20:51:39,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:51:39] 2025-06-04 20:51:39,252 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:51:39] 2025-06-04 20:51:39,256 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:51:39] 2025-06-04 20:51:39,259 [wrapper] pilotpid: 7903
[2025-06-04 16:51:39] 2025-06-04 20:51:39,263 [wrapper] Pilot exit status: 0
[2025-06-04 16:51:39] 2025-06-04 20:51:39,279 [wrapper] pandaids: 6667435352
[2025-06-04 16:51:39] 2025-06-04 20:51:39,316 [wrapper] cleanup supervisor_pilot  1229 7904
[2025-06-04 16:51:39] 2025-06-04 20:51:39,321 [wrapper] Test setup, not cleaning
[2025-06-04 16:51:39] 2025-06-04 20:51:39,324 [wrapper] apfmon messages muted
[2025-06-04 16:51:39] 2025-06-04 20:51:39,328 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:51:39] 2025-06-04 20:51:39,332 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:51:39]  *** Error codes and diagnostics ***
[2025-06-04 16:51:39]     "exeErrorCode": 0,
[2025-06-04 16:51:39]     "exeErrorDiag": "",
[2025-06-04 16:51:39]     "pilotErrorCode": 0,
[2025-06-04 16:51:39]     "pilotErrorDiag": "",
[2025-06-04 16:51:39]  *** Listing of results directory ***
[2025-06-04 16:51:39] total 418296
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas    495897 May 27 14:37 pilot3.tar.gz
[2025-06-04 16:51:39] -rwx------ 1 boincer umatlas     37140 May 27 15:30 runpilot2-wrapper.sh
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas      5111 May 27 15:30 queuedata.json
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas       100 Jun  4 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:51:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 15:18 run_atlas
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas       105 Jun  4 15:18 job.xml
[2025-06-04 16:51:39] -rw-r--r-- 2 boincer umatlas 223858767 Jun  4 15:18 EVNT.44871834._002839.pool.root.1
[2025-06-04 16:51:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:18 start_atlas.sh
[2025-06-04 16:51:39] drwxrwx--x 2 boincer umatlas      4096 Jun  4 15:18 shared
[2025-06-04 16:51:39] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 15:18 input.tar.gz
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas         0 Jun  4 15:18 boinc_lockfile
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 15:18 pandaJob.out
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas    991007 Jun  4 15:19 agis_schedconf.cvmfs.json
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas   1598969 Jun  4 15:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:51:39] drwx------ 4 boincer umatlas      4096 Jun  4 15:19 pilot3
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 16:48 init_data.xml
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas 198881481 Jun  4 16:50 HITS.44871837._072309.pool.root.1
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas       529 Jun  4 16:51 boinc_task_state.xml
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas      1045 Jun  4 16:51 memory_monitor_summary.json
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas    359937 Jun  4 16:51 log.44871837._072309.job.log.tgz.1
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas      7751 Jun  4 16:51 heartbeat.json
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas        95 Jun  4 16:51 pilot_heartbeat.json
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 16:51 boinc_mmap_file
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas        27 Jun  4 16:51 wrapper_checkpoint.txt
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas      4611 Jun  4 16:51 pilotlog.txt
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas    518801 Jun  4 16:51 log.44871837._072309.job.log.1
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas       357 Jun  4 16:51 output.list
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas       620 Jun  4 16:51 runtime_log
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas    901120 Jun  4 16:51 result.tar.gz
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 16:51 runtime_log.err
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas       659 Jun  4 16:51 M7tLDmNBFe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcISKDmF2t8Fm.diag
[2025-06-04 16:51:39] -rw-r--r-- 1 boincer umatlas     21689 Jun  4 16:51 stderr.txt
[2025-06-04 16:51:39] HITS file was successfully produced:
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas 198881481 Jun  4 16:50 shared/HITS.pool.root.1
[2025-06-04 16:51:39]  *** Contents of shared directory: ***
[2025-06-04 16:51:39] total 414240
[2025-06-04 16:51:39] -rw-r--r-- 2 boincer umatlas 223858767 Jun  4 15:18 ATLAS.root_0
[2025-06-04 16:51:39] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:18 start_atlas.sh
[2025-06-04 16:51:39] -rw-r--r-- 2 boincer umatlas    508871 Jun  4 15:18 input.tar.gz
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas 198881481 Jun  4 16:50 HITS.pool.root.1
[2025-06-04 16:51:39] -rw------- 1 boincer umatlas    901120 Jun  4 16:51 result.tar.gz
16:51:40 (3902): run_atlas exited; CPU time 60808.644666
16:51:40 (3902): called boinc_finish(0)

</stderr_txt>
]]>

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