Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:08:18 (16293): wrapper (7.7.26015): starting
15:08:18 (16293): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 15:08:18] Arguments: --nthreads 12
[2025-06-04 15:08:18] Threads: 12
[2025-06-04 15:08:18] Checking for CVMFS
[2025-06-04 15:08:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:08:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:08:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:08:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:08:18] 2.11.2.0 2916 36035 88512 146791 3 1 11179875 20275201 1 130560 0 16466624 99.983 6660732 7941 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 15:08:18] CVMFS is ok
[2025-06-04 15:08:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:08:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:08:18] Further information can be found at the LHC@home message board.
[2025-06-04 15:08:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:08:18] Checking for apptainer binary...
[2025-06-04 15:08:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:08:18] Running /usr/bin/apptainer --version
[2025-06-04 15:08:18] apptainer version 1.3.2-1.el7
[2025-06-04 15:08:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:08:20] c-205-23.aglt2.org
[2025-06-04 15:08:20] apptainer works
[2025-06-04 15:08:20] Set ATHENA_PROC_NUMBER=12
[2025-06-04 15:08:20] Set ATHENA_CORE_NUMBER=12
[2025-06-04 15:08:20] Starting ATLAS job with PandaID=6667885942
[2025-06-04 15:08:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:44:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:44:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 16:44:44]  is_altstaged=None
[2025-06-04 16:44:44]  is_tar=False
[2025-06-04 16:44:44]  lfn=log.44871837._077677.job.log.tgz.1
[2025-06-04 16:44:44]  mtime=0
[2025-06-04 16:44:44]  protocol_id=None
[2025-06-04 16:44:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:44:44]  replicas=None
[2025-06-04 16:44:44]  scope=mc23_13p6TeV
[2025-06-04 16:44:44]  status=None
[2025-06-04 16:44:44]  status_code=0
[2025-06-04 16:44:44]  storage_token=
[2025-06-04 16:44:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667885942/log.44871837._077677.job.log.tgz.1
[2025-06-04 16:44:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/7a/log.44871837._077677.job.log.tgz.1
[2025-06-04 16:44:44]  workdir=None
[2025-06-04 16:44:44] ]
[2025-06-04 16:44:44] 2025-06-04 20:44:22,313 | INFO     | transferring file log.44871837._077677.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667885942/log.44871837._077677.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 16:44:44] 2025-06-04 20:44:22,313 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667885942/log.44871837._077677.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._077677.job
[2025-06-04 16:44:44] 2025-06-04 20:44:22,335 | INFO     | adding to output.list: log.44871837._077677.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/7a/log.44871837._077677.job.log.tg
[2025-06-04 16:44:44] 2025-06-04 20:44:22,336 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:44:44] 2025-06-04 20:44:22,337 | INFO     | summary of transferred files:
[2025-06-04 16:44:44] 2025-06-04 20:44:22,337 | INFO     |  -- lfn=log.44871837._077677.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:44:44] 2025-06-04 20:44:22,337 | INFO     | stage-out finished correctly
[2025-06-04 16:44:44] 2025-06-04 20:44:23,016 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:44:44] 2025-06-04 20:44:24,995 | INFO     | job 6667885942 has state=finished
[2025-06-04 16:44:44] 2025-06-04 20:44:24,995 | INFO     | preparing for final server update for job 6667885942 in state='finished'
[2025-06-04 16:44:44] 2025-06-04 20:44:24,996 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:44:44] 2025-06-04 20:44:24,996 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:44:44] 2025-06-04 20:44:24,996 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:44:44] 2025-06-04 20:44:24,996 | INFO     | job 6667885942 has finished - writing final server update
[2025-06-04 16:44:44] 2025-06-04 20:44:24,997 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:44:44] 2025-06-04 20:44:24,998 | INFO     | executing command: lscpu
[2025-06-04 16:44:44] 2025-06-04 20:44:25,026 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:44:44] 2025-06-04 20:44:25,434 | INFO     | PID=20285 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 16:44:44] 2025-06-04 20:44:25,994 | WARNING  | process 26749 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:44:44] 2025-06-04 20:44:25,994 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667885942/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:44:44] 2025-06-04 20:44:26,083 | INFO     | number of running child processes to parent process 26749: 1
[2025-06-04 16:44:44] 2025-06-04 20:44:26,083 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:44:44] 2025-06-04 20:44:28,586 | INFO     | monitor loop #429: job 0:6667885942 is in state 'finished'
[2025-06-04 16:44:44] 2025-06-04 20:44:28,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:44:44] 2025-06-04 20:44:29,677 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 16:44:44] 2025-06-04 20:44:29,677 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667885942/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:44:44] 2025-06-04 20:44:29,678 | INFO     | extracted standard info from prmon json
[2025-06-04 16:44:44] 2025-06-04 20:44:29,678 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:44:44] 2025-06-04 20:44:29,678 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:44:44] 2025-06-04 20:44:29,678 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:44:44] 2025-06-04 20:44:29,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:44:44] 2025-06-04 20:44:29,681 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:44:44] 2025-06-04 20:44:29,681 | INFO     | sum of square deviations: 204163828.0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,681 | INFO     | sum of deviations: 3838414020.0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,681 | INFO     | mean x: 1749067074.0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,682 | INFO     | mean y: 2673561.620689655
[2025-06-04 16:44:44] 2025-06-04 20:44:29,682 | INFO     | -- intersect: -32880935863.8549
[2025-06-04 16:44:44] 2025-06-04 20:44:29,682 | INFO     | intersect: -32880935863.8549
[2025-06-04 16:44:44] 2025-06-04 20:44:29,682 | INFO     | chi2: 0.01645248180227156
[2025-06-04 16:44:44] 2025-06-04 20:44:29,682 | INFO     | -- intersect: -32880935863.8549
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | current memory leak: 18.80 B/s (using 87 data points, chi2=0.02)
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | ..............................
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | . Timing measurements:
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | . get job = 0 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | . initial setup = 2 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | . payload setup = 10 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | . stage-in = 0 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,683 | INFO     | . payload execution = 5716 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,684 | INFO     | . stage-out = 0 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,684 | INFO     | . log creation = 0 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,684 | INFO     | ..............................
[2025-06-04 16:44:44] 2025-06-04 20:44:29,767 | INFO     | 
[2025-06-04 16:44:44] 2025-06-04 20:44:29,767 | INFO     | job summary report
[2025-06-04 16:44:44] 2025-06-04 20:44:29,767 | INFO     | --------------------------------------------------
[2025-06-04 16:44:44] 2025-06-04 20:44:29,767 | INFO     | PanDA job id: 6667885942
[2025-06-04 16:44:44] 2025-06-04 20:44:29,767 | INFO     | task id: 44871837
[2025-06-04 16:44:44] 2025-06-04 20:44:29,768 | INFO     | errors: (none)
[2025-06-04 16:44:44] 2025-06-04 20:44:29,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:44:44] 2025-06-04 20:44:29,768 | INFO     | pilot state: finished 
[2025-06-04 16:44:44] 2025-06-04 20:44:29,768 | INFO     | transexitcode: 0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,768 | INFO     | exeerrorcode: 0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,768 | INFO     | exeerrordiag: 
[2025-06-04 16:44:44] 2025-06-04 20:44:29,769 | INFO     | exitcode: 0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,769 | INFO     | exitmsg: OK
[2025-06-04 16:44:44] 2025-06-04 20:44:29,769 | INFO     | cpuconsumptiontime: 61672 s
[2025-06-04 16:44:44] 2025-06-04 20:44:29,769 | INFO     | nevents: 400
[2025-06-04 16:44:44] 2025-06-04 20:44:29,769 | INFO     | neventsw: 0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,769 | INFO     | pid: 26749
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | pgrp: 26749
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | corecount: 12
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | event service: False
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 5730: 2424154, 5732: 2433279, 5739: 2433393}
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | --------------------------------------------------
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | 
[2025-06-04 16:44:44] 2025-06-04 20:44:29,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 16:44:44] 2025-06-04 20:44:29,794 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,794 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,795 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,797 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:44:44] 2025-06-04 20:44:29,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,797 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:44:44] 2025-06-04 20:44:29,797 | INFO     | job 6667885942 has completed (purged errors)
[2025-06-04 16:44:44] 2025-06-04 20:44:29,798 | INFO     | overall cleanup function is called
[2025-06-04 16:44:44] 2025-06-04 20:44:30,806 | INFO     | --- collectZombieJob: --- 10, [26749]
[2025-06-04 16:44:44] 2025-06-04 20:44:30,806 | INFO     | zombie collector waiting for pid 26749
[2025-06-04 16:44:44] 2025-06-04 20:44:30,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:44:44] 2025-06-04 20:44:30,806 | INFO     | collected zombie processes
[2025-06-04 16:44:44] 2025-06-04 20:44:30,806 | INFO     | will attempt to kill all subprocesses of pid=26749
[2025-06-04 16:44:44] 2025-06-04 20:44:30,895 | INFO     | process IDs to be killed: [26749] (in reverse order)
[2025-06-04 16:44:44] 2025-06-04 20:44:30,948 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:44:44] 2025-06-04 20:44:30,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:44:44] 2025-06-04 20:44:30,951 | INFO     | did not find any defunct processes belonging to 26749
[2025-06-04 16:44:44] 2025-06-04 20:44:30,953 | INFO     | did not find any defunct processes belonging to 26749
[2025-06-04 16:44:44] 2025-06-04 20:44:30,954 | INFO     | ready for new job
[2025-06-04 16:44:44] 2025-06-04 20:44:30,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:44:44] 2025-06-04 20:44:30,955 | INFO     | **************************************
[2025-06-04 16:44:44] 2025-06-04 20:44:30,955 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:44:44] 2025-06-04 20:44:30,955 | INFO     | **************************************
[2025-06-04 16:44:44] 2025-06-04 20:44:30,955 | INFO     | 
[2025-06-04 16:44:44] 2025-06-04 20:44:30,956 | INFO     | architecture information:
[2025-06-04 16:44:44] 2025-06-04 20:44:30,956 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:44:44] 2025-06-04 20:44:30,972 | INFO     | cat /etc/os-release:
[2025-06-04 16:44:44] NAME="CentOS Linux"
[2025-06-04 16:44:44] VERSION="7 (Core)"
[2025-06-04 16:44:44] ID="centos"
[2025-06-04 16:44:44] ID_LIKE="rhel fedora"
[2025-06-04 16:44:44] VERSION_ID="7"
[2025-06-04 16:44:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:44:44] ANSI_COLOR="0;31"
[2025-06-04 16:44:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:44:44] HOME_URL="https://www.centos.org/"
[2025-06-04 16:44:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:44:44] 
[2025-06-04 16:44:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:44:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:44:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:44:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:44:44] 
[2025-06-04 16:44:44] 2025-06-04 20:44:30,972 | INFO     | **************************************
[2025-06-04 16:44:44] 2025-06-04 20:44:31,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 16:44:44] 2025-06-04 20:44:31,493 | INFO     | sufficient remaining disk space (29381099520 B)
[2025-06-04 16:44:44] 2025-06-04 20:44:31,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:44:44] 2025-06-04 20:44:31,493 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:44:44] 2025-06-04 20:44:31,493 | INFO     | update_server=False
[2025-06-04 16:44:44] 2025-06-04 20:44:31,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:44:44] 2025-06-04 20:44:31,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:44:44] 2025-06-04 20:44:31,494 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:44:44] 2025-06-04 20:44:31,495 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:44:44] 2025-06-04 20:44:31,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:44:44] 2025-06-04 20:44:31,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:44:44] 2025-06-04 20:44:31,547 | INFO     | all job control threads have been joined
[2025-06-04 16:44:44] 2025-06-04 20:44:31,966 | INFO     | all data control threads have been joined
[2025-06-04 16:44:44] 2025-06-04 20:44:32,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:44:44] 2025-06-04 20:44:32,095 | INFO     | aborting loop
[2025-06-04 16:44:44] 2025-06-04 20:44:32,336 | INFO     | all payload control threads have been joined
[2025-06-04 16:44:44] 2025-06-04 20:44:32,499 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:32,500 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:32,553 | INFO     | [job] control thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:32,566 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:32,832 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:32,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:44:44] 2025-06-04 20:44:32,971 | INFO     | [data] control thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,101 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,115 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,316 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,341 | INFO     | [payload] control thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,467 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,480 | INFO     | [job] validate thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:44:44] 2025-06-04 20:44:33,678 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:33,693 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:34,940 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:37,610 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:44:44] 2025-06-04 20:44:39,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139764672128832)>', '<ExcThread(monitor, started 139763847776000)>']
[2025-06-04 16:44:44] 2025-06-04 20:44:39,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:44:44] 2025-06-04 20:44:39,534 | INFO     | [monitor] control thread has ended
[2025-06-04 16:44:44] 2025-06-04 20:44:44,150 | INFO     | all workflow threads have been joined
[2025-06-04 16:44:44] 2025-06-04 20:44:44,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:44:44] 2025-06-04 20:44:44,151 | INFO     | traces error code: 0
[2025-06-04 16:44:44] 2025-06-04 20:44:44,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:44:44] 2025-06-04 20:44:44,250 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:44:44] 2025-06-04 20:44:44,254 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:44:44] 2025-06-04 20:44:44,257 [wrapper] pilotpid: 20285
[2025-06-04 16:44:44] 2025-06-04 20:44:44,261 [wrapper] Pilot exit status: 0
[2025-06-04 16:44:44] 2025-06-04 20:44:44,278 [wrapper] pandaids: 6667885942
[2025-06-04 16:44:44] 2025-06-04 20:44:44,316 [wrapper] cleanup supervisor_pilot 22620 20286
[2025-06-04 16:44:44] 2025-06-04 20:44:44,320 [wrapper] Test setup, not cleaning
[2025-06-04 16:44:44] 2025-06-04 20:44:44,324 [wrapper] apfmon messages muted
[2025-06-04 16:44:44] 2025-06-04 20:44:44,328 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:44:44] 2025-06-04 20:44:44,332 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:44:44]  *** Error codes and diagnostics ***
[2025-06-04 16:44:44]     "exeErrorCode": 0,
[2025-06-04 16:44:44]     "exeErrorDiag": "",
[2025-06-04 16:44:44]     "pilotErrorCode": 0,
[2025-06-04 16:44:44]     "pilotErrorDiag": "",
[2025-06-04 16:44:44]  *** Listing of results directory ***
[2025-06-04 16:44:44] total 419556
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas      5111 May 27 22:50 queuedata.json
[2025-06-04 16:44:44] -rwx------ 1 boincer umatlas     37140 May 27 22:57 runpilot2-wrapper.sh
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas       100 Jun  4 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:44:44] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 15:08 run_atlas
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas       105 Jun  4 15:08 job.xml
[2025-06-04 16:44:44] -rw-r--r-- 2 boincer umatlas 225654650 Jun  4 15:08 EVNT.44871834._003039.pool.root.1
[2025-06-04 16:44:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:08 start_atlas.sh
[2025-06-04 16:44:44] drwxrwx--x 2 boincer umatlas      4096 Jun  4 15:08 shared
[2025-06-04 16:44:44] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 15:08 input.tar.gz
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas         0 Jun  4 15:08 boinc_lockfile
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 15:08 pandaJob.out
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas    990984 Jun  4 15:08 agis_schedconf.cvmfs.json
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas   1598969 Jun  4 15:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:44:44] drwx------ 4 boincer umatlas      4096 Jun  4 15:08 pilot3
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 16:40 init_data.xml
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas        95 Jun  4 16:43 pilot_heartbeat.json
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas 198292770 Jun  4 16:43 HITS.44871837._077677.pool.root.1
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas      1047 Jun  4 16:44 memory_monitor_summary.json
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas        27 Jun  4 16:44 wrapper_checkpoint.txt
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 16:44 boinc_mmap_file
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas       529 Jun  4 16:44 boinc_task_state.xml
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas    382002 Jun  4 16:44 log.44871837._077677.job.log.tgz.1
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas      7751 Jun  4 16:44 heartbeat.json
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas      4476 Jun  4 16:44 pilotlog.txt
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas    538562 Jun  4 16:44 log.44871837._077677.job.log.1
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas       357 Jun  4 16:44 output.list
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas       620 Jun  4 16:44 runtime_log
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas    942080 Jun  4 16:44 result.tar.gz
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 16:44 runtime_log.err
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas       659 Jun  4 16:44 IoCMDmh9Le7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm45aKDmHKWvon.diag
[2025-06-04 16:44:44] -rw-r--r-- 1 boincer umatlas     21453 Jun  4 16:44 stderr.txt
[2025-06-04 16:44:44] HITS file was successfully produced:
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas 198292770 Jun  4 16:43 shared/HITS.pool.root.1
[2025-06-04 16:44:44]  *** Contents of shared directory: ***
[2025-06-04 16:44:44] total 415456
[2025-06-04 16:44:44] -rw-r--r-- 2 boincer umatlas 225654650 Jun  4 15:08 ATLAS.root_0
[2025-06-04 16:44:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 15:08 start_atlas.sh
[2025-06-04 16:44:44] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 15:08 input.tar.gz
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas 198292770 Jun  4 16:43 HITS.pool.root.1
[2025-06-04 16:44:44] -rw------- 1 boincer umatlas    942080 Jun  4 16:44 result.tar.gz
16:44:46 (16293): run_atlas exited; CPU time 61639.241443
16:44:46 (16293): called boinc_finish(0)

</stderr_txt>
]]>

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