Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
07:28:45 (2020592): wrapper (7.7.26015): starting
07:28:45 (2020592): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 07:28:45] Arguments: --nthreads 12
[2025-06-06 07:28:45] Threads: 12
[2025-06-06 07:28:45] Checking for CVMFS
[2025-06-06 07:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 07:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 07:28:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 07:28:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 07:28:45] 2.12.7.0 600724 5063 60404 146844 3 56 2382767 4096001 0 130560 0 3944811 99.991 1161746 221 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-06 07:28:45] CVMFS is ok
[2025-06-06 07:28:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 07:28:45] Checking for apptainer binary...
[2025-06-06 07:28:45] apptainer is not installed, using version from CVMFS
[2025-06-06 07:28:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 07:28:46] lithium
[2025-06-06 07:28:46] apptainer works
[2025-06-06 07:28:46] Set ATHENA_PROC_NUMBER=12
[2025-06-06 07:28:46] Set ATHENA_CORE_NUMBER=12
[2025-06-06 07:28:46] Starting ATLAS job with PandaID=6668326090
[2025-06-06 07:28:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:39:44]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:39:44] 2025-06-06 07:39:28,840 | INFO     | job 6668326090 has finished - writing final server update
[2025-06-06 09:39:44] 2025-06-06 07:39:28,840 | INFO     | total number of processed events: 400 (read)
[2025-06-06 09:39:44] 2025-06-06 07:39:28,864 | INFO     | executing command: lscpu
[2025-06-06 09:39:44] 2025-06-06 07:39:28,884 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:39:44] 2025-06-06 07:39:30,293 | INFO     | monitor loop #571: job 0:6668326090 is in state 'finished'
[2025-06-06 09:39:44] 2025-06-06 07:39:30,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:39:44] 2025-06-06 07:39:31,665 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-06 09:39:44] 2025-06-06 07:39:31,665 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6668326090/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:39:44] 2025-06-06 07:39:31,666 | INFO     | extracted standard info from prmon json
[2025-06-06 09:39:44] 2025-06-06 07:39:31,666 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:39:44] 2025-06-06 07:39:31,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:39:44] 2025-06-06 07:39:31,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:39:44] 2025-06-06 07:39:31,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:39:44] 2025-06-06 07:39:31,669 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:39:44] 2025-06-06 07:39:31,669 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 09:39:44] 2025-06-06 07:39:31,670 | INFO     | sum of deviations: -12901000806.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,670 | INFO     | mean x: 1749191634.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,670 | INFO     | mean y: 2801634.9140625
[2025-06-06 09:39:44] 2025-06-06 07:39:31,670 | INFO     | -- intersect: 34706756446.66125
[2025-06-06 09:39:44] 2025-06-06 07:39:31,670 | INFO     | intersect: 34706756446.66125
[2025-06-06 09:39:44] 2025-06-06 07:39:31,671 | INFO     | chi2: 1.8292739370943651
[2025-06-06 09:39:44] 2025-06-06 07:39:31,671 | INFO     | sum of square deviations: 576985702.0
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | sum of deviations: -11622731014.0
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | mean x: 1749191482.0
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | mean y: 2804297.1544715445
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | -- intersect: 35238308429.74392
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | intersect: 35238308429.74392
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | chi2: 1.828369611332011
[2025-06-06 09:39:44] 2025-06-06 07:39:31,672 | INFO     | current chi2=1.828369611332011 (change=0.04943632246740791 %)
[2025-06-06 09:39:44] 2025-06-06 07:39:31,673 | INFO     | right removable region: 122
[2025-06-06 09:39:44] 2025-06-06 07:39:31,673 | INFO     | sum of square deviations: 576985702.0
[2025-06-06 09:39:44] 2025-06-06 07:39:31,673 | INFO     | sum of deviations: -35120526800.99999
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | mean x: 1749191787.0
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | mean y: 2847111.9593495936
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | -- intersect: 106474353810.44348
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | intersect: 106474353810.44348
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | chi2: 0.2533472704654229
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | current chi2=0.2533472704654229 (change=86.15039194906795 %)
[2025-06-06 09:39:44] 2025-06-06 07:39:31,674 | INFO     | sum of square deviations: 509440249.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,675 | INFO     | sum of deviations: -34899985174.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,675 | INFO     | mean x: 1749191939.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,675 | INFO     | mean y: 2846420.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,675 | INFO     | -- intersect: 119833921440.23085
[2025-06-06 09:39:44] 2025-06-06 07:39:31,675 | INFO     | intersect: 119833921440.23085
[2025-06-06 09:39:44] 2025-06-06 07:39:31,676 | INFO     | chi2: 0.20079049738114477
[2025-06-06 09:39:44] 2025-06-06 07:39:31,676 | INFO     | current chi2=0.20079049738114477 (change=20.74495335502386 %)
[2025-06-06 09:39:44] 2025-06-06 07:39:31,676 | INFO     | left removable region: 20
[2025-06-06 09:39:44] 2025-06-06 07:39:31,676 | INFO     | sum of square deviations: 329031285.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | sum of deviations: -24242672216.000004
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | mean x: 1749192061.5
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | mean y: 2828527.4509803923
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | -- intersect: 128881423538.05771
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | intersect: 128881423538.05771
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | chi2: 0.1862283405475309
[2025-06-06 09:39:44] 2025-06-06 07:39:31,677 | INFO     | -- intersect: 128881423538.05771
[2025-06-06 09:39:44] 2025-06-06 07:39:31,678 | INFO     | current memory leak: -73.68 B/s (using 102 data points, chi2=0.19)
[2025-06-06 09:39:44] 2025-06-06 07:39:31,678 | INFO     | ..............................
[2025-06-06 09:39:44] 2025-06-06 07:39:31,678 | INFO     | . Timing measurements:
[2025-06-06 09:39:44] 2025-06-06 07:39:31,678 | INFO     | . get job = 0 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,679 | INFO     | . initial setup = 4 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,679 | INFO     | . payload setup = 5 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,679 | INFO     | . stage-in = 0 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,679 | INFO     | . payload execution = 7804 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,679 | INFO     | . stage-out = 0 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,680 | INFO     | . log creation = 0 s
[2025-06-06 09:39:44] 2025-06-06 07:39:31,680 | INFO     | ..............................
[2025-06-06 09:39:44] 2025-06-06 07:39:32,144 | INFO     | 
[2025-06-06 09:39:44] 2025-06-06 07:39:32,144 | INFO     | job summary report
[2025-06-06 09:39:44] 2025-06-06 07:39:32,144 | INFO     | --------------------------------------------------
[2025-06-06 09:39:44] 2025-06-06 07:39:32,144 | INFO     | PanDA job id: 6668326090
[2025-06-06 09:39:44] 2025-06-06 07:39:32,145 | INFO     | task id: 44871837
[2025-06-06 09:39:44] 2025-06-06 07:39:32,145 | INFO     | errors: (none)
[2025-06-06 09:39:44] 2025-06-06 07:39:32,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:39:44] 2025-06-06 07:39:32,145 | INFO     | pilot state: finished 
[2025-06-06 09:39:44] 2025-06-06 07:39:32,145 | INFO     | transexitcode: 0
[2025-06-06 09:39:44] 2025-06-06 07:39:32,148 | INFO     | exeerrorcode: 0
[2025-06-06 09:39:44] 2025-06-06 07:39:32,148 | INFO     | exeerrordiag: 
[2025-06-06 09:39:44] 2025-06-06 07:39:32,148 | INFO     | exitcode: 0
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | exitmsg: OK
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | cpuconsumptiontime: 87268 s
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | nevents: 400
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | neventsw: 0
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | pid: 2030944
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | pgrp: 2030944
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | corecount: 12
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | event service: False
[2025-06-06 09:39:44] 2025-06-06 07:39:32,149 | INFO     | sizes: {0: 2397399, 3: 2397605, 11: 2397633, 7813: 2425084, 7814: 2434039, 7817: 2434095, 7820: 2434393}
[2025-06-06 09:39:44] 2025-06-06 07:39:32,150 | INFO     | --------------------------------------------------
[2025-06-06 09:39:44] 2025-06-06 07:39:32,150 | INFO     | 
[2025-06-06 09:39:44] 2025-06-06 07:39:32,150 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,169 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:39:44] 2025-06-06 07:39:32,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,169 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:39:44] 2025-06-06 07:39:32,169 | INFO     | job 6668326090 has completed (purged errors)
[2025-06-06 09:39:44] 2025-06-06 07:39:32,169 | INFO     | overall cleanup function is called
[2025-06-06 09:39:44] 2025-06-06 07:39:33,177 | INFO     | --- collectZombieJob: --- 10, [2030944]
[2025-06-06 09:39:44] 2025-06-06 07:39:33,177 | INFO     | zombie collector waiting for pid 2030944
[2025-06-06 09:39:44] 2025-06-06 07:39:33,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:39:44] 2025-06-06 07:39:33,179 | INFO     | collected zombie processes
[2025-06-06 09:39:44] 2025-06-06 07:39:33,179 | INFO     | will attempt to kill all subprocesses of pid=2030944
[2025-06-06 09:39:44] 2025-06-06 07:39:33,273 | INFO     | process IDs to be killed: [2030944] (in reverse order)
[2025-06-06 09:39:44] 2025-06-06 07:39:33,315 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:39:44] 2025-06-06 07:39:33,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:39:44] 2025-06-06 07:39:33,325 | INFO     | did not find any defunct processes belonging to 2030944
[2025-06-06 09:39:44] 2025-06-06 07:39:33,333 | INFO     | did not find any defunct processes belonging to 2030944
[2025-06-06 09:39:44] 2025-06-06 07:39:33,334 | INFO     | ready for new job
[2025-06-06 09:39:44] 2025-06-06 07:39:33,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:39:44] 2025-06-06 07:39:33,335 | INFO     | **************************************
[2025-06-06 09:39:44] 2025-06-06 07:39:33,336 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:39:44] 2025-06-06 07:39:33,336 | INFO     | **************************************
[2025-06-06 09:39:44] 2025-06-06 07:39:33,336 | INFO     | 
[2025-06-06 09:39:44] 2025-06-06 07:39:33,355 | INFO     | architecture information:
[2025-06-06 09:39:44] 2025-06-06 07:39:33,356 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:39:44] 2025-06-06 07:39:33,367 | INFO     | cat /etc/os-release:
[2025-06-06 09:39:44] NAME="CentOS Linux"
[2025-06-06 09:39:44] VERSION="7 (Core)"
[2025-06-06 09:39:44] ID="centos"
[2025-06-06 09:39:44] ID_LIKE="rhel fedora"
[2025-06-06 09:39:44] VERSION_ID="7"
[2025-06-06 09:39:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:39:44] ANSI_COLOR="0;31"
[2025-06-06 09:39:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:39:44] HOME_URL="https://www.centos.org/"
[2025-06-06 09:39:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:39:44] 
[2025-06-06 09:39:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:39:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:39:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:39:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:39:44] 
[2025-06-06 09:39:44] 2025-06-06 07:39:33,368 | INFO     | **************************************
[2025-06-06 09:39:44] 2025-06-06 07:39:33,417 | INFO     | PID=2024314 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 09:39:44] 2025-06-06 07:39:33,871 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 09:39:44] 2025-06-06 07:39:33,884 | INFO     | sufficient remaining disk space (37153144832 B)
[2025-06-06 09:39:44] 2025-06-06 07:39:33,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:39:44] 2025-06-06 07:39:33,884 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:39:44] 2025-06-06 07:39:33,884 | INFO     | update_server=False
[2025-06-06 09:39:44] 2025-06-06 07:39:33,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:39:44] 2025-06-06 07:39:33,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:39:44] 2025-06-06 07:39:33,885 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:39:44] 2025-06-06 07:39:33,885 | INFO     | aborting loop
[2025-06-06 09:39:44] 2025-06-06 07:39:33,885 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:39:44] 2025-06-06 07:39:33,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:39:44] 2025-06-06 07:39:33,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:39:44] 2025-06-06 07:39:34,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:39:44] 2025-06-06 07:39:34,325 | INFO     | all data control threads have been joined
[2025-06-06 09:39:44] 2025-06-06 07:39:34,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:39:44] 2025-06-06 07:39:34,889 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:34,890 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,117 | INFO     | all payload control threads have been joined
[2025-06-06 09:39:44] 2025-06-06 07:39:35,209 | INFO     | [job] validate thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,234 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,253 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,329 | INFO     | [data] control thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,345 | INFO     | all job control threads have been joined
[2025-06-06 09:39:44] 2025-06-06 07:39:35,465 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,526 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,709 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:35,841 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:36,017 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:36,121 | INFO     | [payload] control thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:36,249 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:36,349 | INFO     | [job] control thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:36,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:39:44] 2025-06-06 07:39:37,785 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:38,849 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:39:44] 2025-06-06 07:39:39,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147036936000)>', '<ExcThread(monitor, started 140146301191936)>']
[2025-06-06 09:39:44] 2025-06-06 07:39:39,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:39:44] 2025-06-06 07:39:39,909 | INFO     | [monitor] control thread has ended
[2025-06-06 09:39:44] 2025-06-06 07:39:44,121 | INFO     | all workflow threads have been joined
[2025-06-06 09:39:44] 2025-06-06 07:39:44,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:39:44] 2025-06-06 07:39:44,122 | INFO     | traces error code: 0
[2025-06-06 09:39:44] 2025-06-06 07:39:44,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:39:44] 2025-06-06 07:39:44,228 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:39:44] 2025-06-06 07:39:44,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:39:44] 2025-06-06 07:39:44,232 [wrapper] pilotpid: 2024314
[2025-06-06 09:39:44] 2025-06-06 07:39:44,234 [wrapper] Pilot exit status: 0
[2025-06-06 09:39:44] 2025-06-06 07:39:44,243 [wrapper] pandaids: 6668326090
[2025-06-06 09:39:44] 2025-06-06 07:39:44,270 [wrapper] cleanup supervisor_pilot 2045348 2024315
[2025-06-06 09:39:44] 2025-06-06 07:39:44,272 [wrapper] Test setup, not cleaning
[2025-06-06 09:39:44] 2025-06-06 07:39:44,274 [wrapper] apfmon messages muted
[2025-06-06 09:39:44] 2025-06-06 07:39:44,276 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:39:44] 2025-06-06 07:39:44,279 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:39:44]  *** Error codes and diagnostics ***
[2025-06-06 09:39:44]     "exeErrorCode": 0,
[2025-06-06 09:39:44]     "exeErrorDiag": "",
[2025-06-06 09:39:44]     "pilotErrorCode": 0,
[2025-06-06 09:39:44]     "pilotErrorDiag": "",
[2025-06-06 09:39:44]  *** Listing of results directory ***
[2025-06-06 09:39:44] total 422344
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc    495897 Mai 28 11:57 pilot3.tar.gz
[2025-06-06 09:39:44] -rwx------ 1 boinc boinc     37140 Mai 28 12:14 runpilot2-wrapper.sh
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc      5111 Mai 28 12:14 queuedata.json
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc       100 Jun  6 07:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:39:44] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 07:28 run_atlas
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc       105 Jun  6 07:28 job.xml
[2025-06-06 09:39:44] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:28 start_atlas.sh
[2025-06-06 09:39:44] drwxrwx--x 2 boinc boinc      4096 Jun  6 07:28 shared
[2025-06-06 09:39:44] -rw-r--r-- 2 boinc boinc    508881 Jun  6 07:28 input.tar.gz
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc      6048 Jun  6 07:28 init_data.xml
[2025-06-06 09:39:44] -rw-r--r-- 2 boinc boinc 223530114 Jun  6 07:28 EVNT.44871834._003222.pool.root.1
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc         0 Jun  6 07:28 boinc_lockfile
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc      2559 Jun  6 07:28 pandaJob.out
[2025-06-06 09:39:44] -rw------- 1 boinc boinc    988109 Jun  6 07:28 agis_schedconf.cvmfs.json
[2025-06-06 09:39:44] -rw------- 1 boinc boinc   1598969 Jun  6 07:28 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:39:44] drwx------ 4 boinc boinc      4096 Jun  6 07:28 pilot3
[2025-06-06 09:39:44] -rw------- 1 boinc boinc 202912094 Jun  6 09:38 HITS.44871837._082556.pool.root.1
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc       529 Jun  6 09:39 boinc_task_state.xml
[2025-06-06 09:39:44] -rw------- 1 boinc boinc        95 Jun  6 09:39 pilot_heartbeat.json
[2025-06-06 09:39:44] -rw------- 1 boinc boinc      1069 Jun  6 09:39 memory_monitor_summary.json
[2025-06-06 09:39:44] -rw------- 1 boinc boinc    387107 Jun  6 09:39 log.44871837._082556.job.log.tgz.1
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc        27 Jun  6 09:39 wrapper_checkpoint.txt
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:39 boinc_mmap_file
[2025-06-06 09:39:44] -rw------- 1 boinc boinc      7740 Jun  6 09:39 heartbeat.json
[2025-06-06 09:39:44] -rw------- 1 boinc boinc      4802 Jun  6 09:39 pilotlog.txt
[2025-06-06 09:39:44] -rw------- 1 boinc boinc    713797 Jun  6 09:39 log.44871837._082556.job.log.1
[2025-06-06 09:39:44] -rw------- 1 boinc boinc       357 Jun  6 09:39 output.list
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:39 runtime_log
[2025-06-06 09:39:44] -rw------- 1 boinc boinc   1116160 Jun  6 09:39 result.tar.gz
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc      8716 Jun  6 09:39 runtime_log.err
[2025-06-06 09:39:44] -rw------- 1 boinc boinc       655 Jun  6 09:39 2K0MDmyySe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmoITKDma7kt4n.diag
[2025-06-06 09:39:44] -rw-r--r-- 1 boinc boinc     20924 Jun  6 09:39 stderr.txt
[2025-06-06 09:39:44] HITS file was successfully produced:
[2025-06-06 09:39:44] -rw------- 1 boinc boinc 202912094 Jun  6 09:38 shared/HITS.pool.root.1
[2025-06-06 09:39:44]  *** Contents of shared directory: ***
[2025-06-06 09:39:44] total 418068
[2025-06-06 09:39:44] -rw-r--r-- 2 boinc boinc     15093 Jun  6 07:28 start_atlas.sh
[2025-06-06 09:39:44] -rw-r--r-- 2 boinc boinc    508881 Jun  6 07:28 input.tar.gz
[2025-06-06 09:39:44] -rw-r--r-- 2 boinc boinc 223530114 Jun  6 07:28 ATLAS.root_0
[2025-06-06 09:39:44] -rw------- 1 boinc boinc 202912094 Jun  6 09:38 HITS.pool.root.1
[2025-06-06 09:39:44] -rw------- 1 boinc boinc   1116160 Jun  6 09:39 result.tar.gz
09:39:45 (2020592): run_atlas exited; CPU time 85964.576456
09:39:45 (2020592): called boinc_finish(0)

</stderr_txt>
]]>

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