Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:59:24 (3382): wrapper (7.7.26015): starting
14:59:24 (3382): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:59:24] Arguments: --nthreads 8
[2025-06-04 14:59:24] Threads: 8
[2025-06-04 14:59:24] Checking for CVMFS
[2025-06-04 14:59:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:59:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:59:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:59:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:59:25] 2.11.2.0 2860 36073 77500 146791 2 1 11516519 20275200 1 130560 0 12080948 99.977 6608669 7960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 14:59:25] CVMFS is ok
[2025-06-04 14:59:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:59:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:59:25] Further information can be found at the LHC@home message board.
[2025-06-04 14:59:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:59:25] Checking for apptainer binary...
[2025-06-04 14:59:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:59:25] Running /usr/bin/apptainer --version
[2025-06-04 14:59:25] apptainer version 1.3.2-1.el7
[2025-06-04 14:59:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:59:27] c-204-39.aglt2.org
[2025-06-04 14:59:27] apptainer works
[2025-06-04 14:59:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:59:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:59:27] Starting ATLAS job with PandaID=6666906396
[2025-06-04 14:59:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:41:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:41:28] 2025-06-04 21:41:04,641 | INFO     | number of running child processes to parent process 13749: 1
[2025-06-04 17:41:28] 2025-06-04 21:41:04,641 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:41:28] 2025-06-04 21:41:07,145 | INFO     | monitor loop #713: job 0:6666906396 is in state 'finished'
[2025-06-04 17:41:28] 2025-06-04 21:41:07,145 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,223 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 17:41:28] 2025-06-04 21:41:07,224 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666906396/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,225 | INFO     | extracted standard info from prmon json
[2025-06-04 17:41:28] 2025-06-04 21:41:07,225 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:41:28] 2025-06-04 21:41:07,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:41:28] 2025-06-04 21:41:07,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:41:28] 2025-06-04 21:41:07,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:41:28] 2025-06-04 21:41:07,230 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:41:28] 2025-06-04 21:41:07,230 | INFO     | sum of square deviations: 1223016419.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,231 | INFO     | sum of deviations: 15840224745.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,232 | INFO     | mean x: 1749068407.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,232 | INFO     | mean y: 2491470.424050633
[2025-06-04 17:41:28] 2025-06-04 21:41:07,232 | INFO     | -- intersect: -22651036502.144417
[2025-06-04 17:41:28] 2025-06-04 21:41:07,232 | INFO     | intersect: -22651036502.144417
[2025-06-04 17:41:28] 2025-06-04 21:41:07,232 | INFO     | chi2: 1.554192782730034
[2025-06-04 17:41:28] 2025-06-04 21:41:07,233 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,234 | INFO     | sum of deviations: 15180473847.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,234 | INFO     | mean x: 1749068255.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,234 | INFO     | mean y: 2490575.614379085
[2025-06-04 17:41:28] 2025-06-04 21:41:07,234 | INFO     | -- intersect: -23906317287.044037
[2025-06-04 17:41:28] 2025-06-04 21:41:07,235 | INFO     | intersect: -23906317287.044037
[2025-06-04 17:41:28] 2025-06-04 21:41:07,235 | INFO     | chi2: 1.555875746197827
[2025-06-04 17:41:28] 2025-06-04 21:41:07,235 | INFO     | current chi2=1.555875746197827 (change=-0.10828537402141558 %)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,235 | INFO     | right removable region: 152
[2025-06-04 17:41:28] 2025-06-04 21:41:07,236 | INFO     | sum of square deviations: 1110539892.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,237 | INFO     | sum of deviations: -7718269426.999999
[2025-06-04 17:41:28] 2025-06-04 21:41:07,237 | INFO     | mean x: 1749068560.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,237 | INFO     | mean y: 2522932.1503267973
[2025-06-04 17:41:28] 2025-06-04 21:41:07,237 | INFO     | -- intersect: 12158576478.378916
[2025-06-04 17:41:28] 2025-06-04 21:41:07,237 | INFO     | intersect: 12158576478.378916
[2025-06-04 17:41:28] 2025-06-04 21:41:07,238 | INFO     | chi2: 0.09547237469208236
[2025-06-04 17:41:28] 2025-06-04 21:41:07,238 | INFO     | current chi2=0.09547237469208236 (change=93.85710860628375 %)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,238 | INFO     | sum of square deviations: 1005179777.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,239 | INFO     | sum of deviations: -4689701563.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,239 | INFO     | mean x: 1749068712.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,239 | INFO     | mean y: 2518487.0337837837
[2025-06-04 17:41:28] 2025-06-04 21:41:07,239 | INFO     | -- intersect: 8162860013.363737
[2025-06-04 17:41:28] 2025-06-04 21:41:07,239 | INFO     | intersect: 8162860013.363737
[2025-06-04 17:41:28] 2025-06-04 21:41:07,239 | INFO     | chi2: 0.07627262376335729
[2025-06-04 17:41:28] 2025-06-04 21:41:07,240 | INFO     | current chi2=0.07627262376335729 (change=20.110268536472603 %)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,240 | INFO     | left removable region: 20
[2025-06-04 17:41:28] 2025-06-04 21:41:07,240 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,241 | INFO     | sum of deviations: 3312009426.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,241 | INFO     | mean x: 1749068834.5
[2025-06-04 17:41:28] 2025-06-04 21:41:07,241 | INFO     | mean y: 2504695.037878788
[2025-06-04 17:41:28] 2025-06-04 21:41:07,241 | INFO     | -- intersect: -8120621007.292901
[2025-06-04 17:41:28] 2025-06-04 21:41:07,241 | INFO     | intersect: -8120621007.292901
[2025-06-04 17:41:28] 2025-06-04 21:41:07,241 | INFO     | chi2: 0.0005421324291475068
[2025-06-04 17:41:28] 2025-06-04 21:41:07,242 | INFO     | -- intersect: -8120621007.292901
[2025-06-04 17:41:28] 2025-06-04 21:41:07,242 | INFO     | current memory leak: 4.64 B/s (using 132 data points, chi2=0.00)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,242 | INFO     | ..............................
[2025-06-04 17:41:28] 2025-06-04 21:41:07,242 | INFO     | . Timing measurements:
[2025-06-04 17:41:28] 2025-06-04 21:41:07,242 | INFO     | . get job = 0 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | . initial setup = 3 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | . payload setup = 12 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | . stage-in = 0 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | . payload execution = 9641 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | . stage-out = 0 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | . log creation = 0 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,243 | INFO     | ..............................
[2025-06-04 17:41:28] 2025-06-04 21:41:07,463 | INFO     | 
[2025-06-04 17:41:28] 2025-06-04 21:41:07,463 | INFO     | job summary report
[2025-06-04 17:41:28] 2025-06-04 21:41:07,463 | INFO     | --------------------------------------------------
[2025-06-04 17:41:28] 2025-06-04 21:41:07,463 | INFO     | PanDA job id: 6666906396
[2025-06-04 17:41:28] 2025-06-04 21:41:07,463 | INFO     | task id: 44871837
[2025-06-04 17:41:28] 2025-06-04 21:41:07,464 | INFO     | errors: (none)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,464 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:41:28] 2025-06-04 21:41:07,464 | INFO     | pilot state: finished 
[2025-06-04 17:41:28] 2025-06-04 21:41:07,464 | INFO     | transexitcode: 0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,464 | INFO     | exeerrorcode: 0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,465 | INFO     | exeerrordiag: 
[2025-06-04 17:41:28] 2025-06-04 21:41:07,465 | INFO     | exitcode: 0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,465 | INFO     | exitmsg: OK
[2025-06-04 17:41:28] 2025-06-04 21:41:07,465 | INFO     | cpuconsumptiontime: 72090 s
[2025-06-04 17:41:28] 2025-06-04 21:41:07,465 | INFO     | nevents: 400
[2025-06-04 17:41:28] 2025-06-04 21:41:07,465 | INFO     | neventsw: 0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,466 | INFO     | pid: 13749
[2025-06-04 17:41:28] 2025-06-04 21:41:07,466 | INFO     | pgrp: 13749
[2025-06-04 17:41:28] 2025-06-04 21:41:07,466 | INFO     | corecount: 8
[2025-06-04 17:41:28] 2025-06-04 21:41:07,466 | INFO     | event service: False
[2025-06-04 17:41:28] 2025-06-04 21:41:07,466 | INFO     | sizes: {0: 2397221, 1: 2397420, 7: 2397626, 12: 2397654, 9658: 2425915, 9660: 2435040, 9666: 2435154}
[2025-06-04 17:41:28] 2025-06-04 21:41:07,466 | INFO     | --------------------------------------------------
[2025-06-04 17:41:28] 2025-06-04 21:41:07,467 | INFO     | 
[2025-06-04 17:41:28] 2025-06-04 21:41:07,467 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 17:41:28] 2025-06-04 21:41:07,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:41:28] 2025-06-04 21:41:07,501 | INFO     | job 6666906396 has completed (purged errors)
[2025-06-04 17:41:28] 2025-06-04 21:41:07,501 | INFO     | overall cleanup function is called
[2025-06-04 17:41:28] 2025-06-04 21:41:08,510 | INFO     | --- collectZombieJob: --- 10, [13749]
[2025-06-04 17:41:28] 2025-06-04 21:41:08,510 | INFO     | zombie collector waiting for pid 13749
[2025-06-04 17:41:28] 2025-06-04 21:41:08,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:41:28] 2025-06-04 21:41:08,511 | INFO     | collected zombie processes
[2025-06-04 17:41:28] 2025-06-04 21:41:08,511 | INFO     | will attempt to kill all subprocesses of pid=13749
[2025-06-04 17:41:28] 2025-06-04 21:41:08,599 | INFO     | process IDs to be killed: [13749] (in reverse order)
[2025-06-04 17:41:28] 2025-06-04 21:41:08,658 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:41:28] 2025-06-04 21:41:08,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:41:28] 2025-06-04 21:41:08,662 | INFO     | did not find any defunct processes belonging to 13749
[2025-06-04 17:41:28] 2025-06-04 21:41:08,666 | INFO     | did not find any defunct processes belonging to 13749
[2025-06-04 17:41:28] 2025-06-04 21:41:08,666 | INFO     | ready for new job
[2025-06-04 17:41:28] 2025-06-04 21:41:08,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:41:28] 2025-06-04 21:41:08,668 | INFO     | **************************************
[2025-06-04 17:41:28] 2025-06-04 21:41:08,669 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:41:28] 2025-06-04 21:41:08,669 | INFO     | **************************************
[2025-06-04 17:41:28] 2025-06-04 21:41:08,669 | INFO     | 
[2025-06-04 17:41:28] 2025-06-04 21:41:08,669 | INFO     | architecture information:
[2025-06-04 17:41:28] 2025-06-04 21:41:08,670 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:41:28] 2025-06-04 21:41:08,689 | INFO     | cat /etc/os-release:
[2025-06-04 17:41:28] NAME="CentOS Linux"
[2025-06-04 17:41:28] VERSION="7 (Core)"
[2025-06-04 17:41:28] ID="centos"
[2025-06-04 17:41:28] ID_LIKE="rhel fedora"
[2025-06-04 17:41:28] VERSION_ID="7"
[2025-06-04 17:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:41:28] ANSI_COLOR="0;31"
[2025-06-04 17:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:41:28] HOME_URL="https://www.centos.org/"
[2025-06-04 17:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:41:28] 
[2025-06-04 17:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:41:28] 
[2025-06-04 17:41:28] 2025-06-04 21:41:08,690 | INFO     | **************************************
[2025-06-04 17:41:28] 2025-06-04 21:41:09,193 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 17:41:28] 2025-06-04 21:41:09,213 | INFO     | sufficient remaining disk space (18570280960 B)
[2025-06-04 17:41:28] 2025-06-04 21:41:09,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:41:28] 2025-06-04 21:41:09,214 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:41:28] 2025-06-04 21:41:09,214 | INFO     | update_server=False
[2025-06-04 17:41:28] 2025-06-04 21:41:09,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:41:28] 2025-06-04 21:41:09,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:41:28] 2025-06-04 21:41:09,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:41:28] 2025-06-04 21:41:09,646 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 17:41:28] 2025-06-04 21:41:09,646 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 17:41:28] 2025-06-04 21:41:09,647 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:41:28] 2025-06-04 21:41:09,647 | INFO     | will abort loop
[2025-06-04 17:41:28] 2025-06-04 21:41:09,835 | INFO     | all data control threads have been joined
[2025-06-04 17:41:28] 2025-06-04 21:41:10,000 | INFO     | PID=7060 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 17:41:28] 2025-06-04 21:41:10,000 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:41:28] 2025-06-04 21:41:10,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:41:28] 2025-06-04 21:41:10,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:41:28] 2025-06-04 21:41:10,220 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:10,221 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:10,451 | INFO     | all payload control threads have been joined
[2025-06-04 17:41:28] 2025-06-04 21:41:10,653 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:10,770 | INFO     | all job control threads have been joined
[2025-06-04 17:41:28] 2025-06-04 21:41:10,840 | INFO     | [data] control thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:10,884 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:10,946 | INFO     | [job] validate thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:10,982 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,002 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,019 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,221 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,386 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,456 | INFO     | [payload] control thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,581 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,771 | INFO     | [job] control thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:11,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:41:28] 2025-06-04 21:41:15,868 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:20,130 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:41:28] 2025-06-04 21:41:21,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:41:28] 2025-06-04 21:41:22,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981353727808)>', '<ExcThread(monitor, started 139981053990656)>']
[2025-06-04 17:41:28] 2025-06-04 21:41:23,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:41:28] 2025-06-04 21:41:23,054 | INFO     | [monitor] control thread has ended
[2025-06-04 17:41:28] 2025-06-04 21:41:27,821 | INFO     | all workflow threads have been joined
[2025-06-04 17:41:28] 2025-06-04 21:41:27,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:41:28] 2025-06-04 21:41:27,827 | INFO     | traces error code: 0
[2025-06-04 17:41:28] 2025-06-04 21:41:27,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:41:28] 2025-06-04 21:41:27,935 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:41:28] 2025-06-04 21:41:27,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:41:28] 2025-06-04 21:41:27,944 [wrapper] pilotpid: 7060
[2025-06-04 17:41:28] 2025-06-04 21:41:27,949 [wrapper] Pilot exit status: 0
[2025-06-04 17:41:28] 2025-06-04 21:41:27,967 [wrapper] pandaids: 6666906396
[2025-06-04 17:41:28] 2025-06-04 21:41:28,014 [wrapper] cleanup supervisor_pilot 16708 7061
[2025-06-04 17:41:28] 2025-06-04 21:41:28,018 [wrapper] Test setup, not cleaning
[2025-06-04 17:41:28] 2025-06-04 21:41:28,022 [wrapper] apfmon messages muted
[2025-06-04 17:41:28] 2025-06-04 21:41:28,027 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:41:28] 2025-06-04 21:41:28,032 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:41:28]  *** Error codes and diagnostics ***
[2025-06-04 17:41:28]     "exeErrorCode": 0,
[2025-06-04 17:41:28]     "exeErrorDiag": "",
[2025-06-04 17:41:28]     "pilotErrorCode": 0,
[2025-06-04 17:41:28]     "pilotErrorDiag": "",
[2025-06-04 17:41:28]  *** Listing of results directory ***
[2025-06-04 17:41:28] total 419128
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas    495897 May 27 05:27 pilot3.tar.gz
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas      5111 May 27 06:18 queuedata.json
[2025-06-04 17:41:28] -rwx------ 1 boincer umatlas     37140 May 27 06:18 runpilot2-wrapper.sh
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas       100 Jun  4 14:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:41:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 14:59 run_atlas
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas       105 Jun  4 14:59 job.xml
[2025-06-04 17:41:28] -rw-r--r-- 2 boincer umatlas 224436198 Jun  4 14:59 EVNT.44871834._002589.pool.root.1
[2025-06-04 17:41:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:59 start_atlas.sh
[2025-06-04 17:41:28] drwxrwx--x 2 boincer umatlas      4096 Jun  4 14:59 shared
[2025-06-04 17:41:28] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 14:59 input.tar.gz
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas         0 Jun  4 14:59 boinc_lockfile
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 14:59 pandaJob.out
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas    990984 Jun  4 14:59 agis_schedconf.cvmfs.json
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas   1598969 Jun  4 14:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:41:28] drwx------ 4 boincer umatlas      4096 Jun  4 14:59 pilot3
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 17:40 init_data.xml
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas 198480930 Jun  4 17:40 HITS.44871837._065741.pool.root.1
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas       529 Jun  4 17:40 boinc_task_state.xml
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas      1049 Jun  4 17:40 memory_monitor_summary.json
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas        95 Jun  4 17:40 pilot_heartbeat.json
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas    345664 Jun  4 17:41 log.44871837._065741.job.log.tgz.1
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas        27 Jun  4 17:41 wrapper_checkpoint.txt
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 17:41 boinc_mmap_file
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas      7744 Jun  4 17:41 heartbeat.json
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas      4927 Jun  4 17:41 pilotlog.txt
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas    871895 Jun  4 17:41 log.44871837._065741.job.log.1
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas       357 Jun  4 17:41 output.list
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas       620 Jun  4 17:41 runtime_log
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas   1239040 Jun  4 17:41 result.tar.gz
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas       661 Jun  4 17:41 V38MDmhZ6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm46YKDm2dSbqm.diag
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 17:41 runtime_log.err
[2025-06-04 17:41:28] -rw-r--r-- 1 boincer umatlas     21038 Jun  4 17:41 stderr.txt
[2025-06-04 17:41:28] HITS file was successfully produced:
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas 198480930 Jun  4 17:40 shared/HITS.pool.root.1
[2025-06-04 17:41:28]  *** Contents of shared directory: ***
[2025-06-04 17:41:28] total 414740
[2025-06-04 17:41:28] -rw-r--r-- 2 boincer umatlas 224436198 Jun  4 14:59 ATLAS.root_0
[2025-06-04 17:41:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:59 start_atlas.sh
[2025-06-04 17:41:28] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 14:59 input.tar.gz
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas 198480930 Jun  4 17:40 HITS.pool.root.1
[2025-06-04 17:41:28] -rw------- 1 boincer umatlas   1239040 Jun  4 17:41 result.tar.gz
17:41:30 (3382): run_atlas exited; CPU time 72023.201788
17:41:30 (3382): called boinc_finish(0)

</stderr_txt>
]]>

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