Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:53:36 (60426): wrapper (7.7.26015): starting
14:53:36 (60426): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:53:36] Arguments: --nthreads 8
[2025-06-04 14:53:36] Threads: 8
[2025-06-04 14:53:36] Checking for CVMFS
[2025-06-04 14:53:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:53:36] 2.11.2.0 72091 1509 142688 146791 3 675 11531980 18432001 12340 130560 0 21592637 99.880 4574284 76940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 14:53:36] CVMFS is ok
[2025-06-04 14:53:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:53:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:53:36] Further information can be found at the LHC@home message board.
[2025-06-04 14:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:53:36] Checking for apptainer binary...
[2025-06-04 14:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:53:36] Running /usr/bin/apptainer --version
[2025-06-04 14:53:36] apptainer version 1.3.2-1.el7
[2025-06-04 14:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:53:37] c-212-4.aglt2.org
[2025-06-04 14:53:37] apptainer works
[2025-06-04 14:53:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:53:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:53:37] Starting ATLAS job with PandaID=6667885952
[2025-06-04 14:53:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:13:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:13:06] 2025-06-04 21:12:49,804 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:13:06] 2025-06-04 21:12:49,804 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667885952/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,805 | INFO     | extracted standard info from prmon json
[2025-06-04 17:13:06] 2025-06-04 21:12:49,805 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:13:06] 2025-06-04 21:12:49,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:13:06] 2025-06-04 21:12:49,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:13:06] 2025-06-04 21:12:49,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:13:06] 2025-06-04 21:12:49,807 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:13:06] 2025-06-04 21:12:49,808 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,808 | INFO     | sum of deviations: 8033796624.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,808 | INFO     | mean x: 1749067394.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,808 | INFO     | mean y: 2455911.8540145988
[2025-06-04 17:13:06] 2025-06-04 21:12:49,808 | INFO     | -- intersect: -17621783803.30522
[2025-06-04 17:13:06] 2025-06-04 21:12:49,808 | INFO     | intersect: -17621783803.30522
[2025-06-04 17:13:06] 2025-06-04 21:12:49,809 | INFO     | chi2: 1.956260809305379
[2025-06-04 17:13:06] 2025-06-04 21:12:49,809 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,809 | INFO     | sum of deviations: 16371945702.5
[2025-06-04 17:13:06] 2025-06-04 21:12:49,809 | INFO     | mean x: 1749067241.5
[2025-06-04 17:13:06] 2025-06-04 21:12:49,809 | INFO     | mean y: 2470537.856060606
[2025-06-04 17:13:06] 2025-06-04 21:12:49,809 | INFO     | -- intersect: -40151778645.27049
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | intersect: -40151778645.27049
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | chi2: 1.1833417048071881
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | current chi2=1.1833417048071881 (change=39.51002344992209 %)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | sum of deviations: 15567190545.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | mean x: 1749067089.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,810 | INFO     | mean y: 2468964.7322834646
[2025-06-04 17:13:06] 2025-06-04 21:12:49,811 | INFO     | -- intersect: -42867586917.82529
[2025-06-04 17:13:06] 2025-06-04 21:12:49,811 | INFO     | intersect: -42867586917.82529
[2025-06-04 17:13:06] 2025-06-04 21:12:49,811 | INFO     | chi2: 1.1847056191230676
[2025-06-04 17:13:06] 2025-06-04 21:12:49,811 | INFO     | current chi2=1.1847056191230676 (change=-0.11525954932026074 %)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,811 | INFO     | right removable region: 126
[2025-06-04 17:13:06] 2025-06-04 21:12:49,811 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | sum of deviations: -8474882927.000001
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | mean x: 1749067546.5
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | mean y: 2485247.484848485
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | -- intersect: 20788201641.4821
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | intersect: 20788201641.4821
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | chi2: 0.8044195551829901
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | current chi2=0.8044195551829901 (change=58.87973876711153 %)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,812 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | sum of deviations: -7834613690.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | mean x: 1749067699.0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | mean y: 2483987.771653543
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | -- intersect: 21578017663.86408
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | intersect: 21578017663.86408
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | chi2: 0.8048918717570565
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | current chi2=0.8048918717570565 (change=-0.05871520290911869 %)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,813 | INFO     | left removable region: 20
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | sum of deviations: 1606642857.5
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | mean x: 1749067668.5
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | mean y: 2496831.5566037735
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | -- intersect: -7607221704.060188
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | intersect: -7607221704.060188
[2025-06-04 17:13:06] 2025-06-04 21:12:49,814 | INFO     | chi2: 0.0023992626806630312
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | -- intersect: -7607221704.060188
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | current memory leak: 4.35 B/s (using 106 data points, chi2=0.00)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | ..............................
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | . Timing measurements:
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | . get job = 0 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | . initial setup = 2 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | . payload setup = 4 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,815 | INFO     | . stage-in = 0 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,816 | INFO     | . payload execution = 8310 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,816 | INFO     | . stage-out = 1 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,816 | INFO     | . log creation = 0 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,816 | INFO     | ..............................
[2025-06-04 17:13:06] 2025-06-04 21:12:49,896 | INFO     | 
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | job summary report
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | --------------------------------------------------
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | PanDA job id: 6667885952
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | task id: 44871837
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | errors: (none)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | pilot state: finished 
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | transexitcode: 0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | exeerrorcode: 0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | exeerrordiag: 
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | exitcode: 0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | exitmsg: OK
[2025-06-04 17:13:06] 2025-06-04 21:12:49,897 | INFO     | cpuconsumptiontime: 44305 s
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | nevents: 400
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | neventsw: 0
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | pid: 1084
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | pgrp: 1084
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | corecount: 8
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | event service: False
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | sizes: {0: 2397390, 3: 2397596, 11: 2397624, 8318: 2425370, 8319: 2434311, 8321: 2434367, 8331: 2434665}
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | --------------------------------------------------
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | 
[2025-06-04 17:13:06] 2025-06-04 21:12:49,898 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 17:13:06] 2025-06-04 21:12:49,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | job 6667885952 has completed (purged errors)
[2025-06-04 17:13:06] 2025-06-04 21:12:49,923 | INFO     | overall cleanup function is called
[2025-06-04 17:13:06] 2025-06-04 21:12:50,930 | INFO     | --- collectZombieJob: --- 10, [1084]
[2025-06-04 17:13:06] 2025-06-04 21:12:50,931 | INFO     | zombie collector waiting for pid 1084
[2025-06-04 17:13:06] 2025-06-04 21:12:50,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:13:06] 2025-06-04 21:12:50,931 | INFO     | collected zombie processes
[2025-06-04 17:13:06] 2025-06-04 21:12:50,931 | INFO     | will attempt to kill all subprocesses of pid=1084
[2025-06-04 17:13:06] 2025-06-04 21:12:51,228 | INFO     | process IDs to be killed: [1084] (in reverse order)
[2025-06-04 17:13:06] 2025-06-04 21:12:51,327 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:13:06] 2025-06-04 21:12:51,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:13:06] 2025-06-04 21:12:51,334 | INFO     | did not find any defunct processes belonging to 1084
[2025-06-04 17:13:06] 2025-06-04 21:12:51,341 | INFO     | did not find any defunct processes belonging to 1084
[2025-06-04 17:13:06] 2025-06-04 21:12:51,341 | INFO     | ready for new job
[2025-06-04 17:13:06] 2025-06-04 21:12:51,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:13:06] 2025-06-04 21:12:51,342 | INFO     | **************************************
[2025-06-04 17:13:06] 2025-06-04 21:12:51,342 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:13:06] 2025-06-04 21:12:51,343 | INFO     | **************************************
[2025-06-04 17:13:06] 2025-06-04 21:12:51,343 | INFO     | 
[2025-06-04 17:13:06] 2025-06-04 21:12:51,346 | INFO     | architecture information:
[2025-06-04 17:13:06] 2025-06-04 21:12:51,347 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:13:06] 2025-06-04 21:12:51,363 | INFO     | cat /etc/os-release:
[2025-06-04 17:13:06] NAME="CentOS Linux"
[2025-06-04 17:13:06] VERSION="7 (Core)"
[2025-06-04 17:13:06] ID="centos"
[2025-06-04 17:13:06] ID_LIKE="rhel fedora"
[2025-06-04 17:13:06] VERSION_ID="7"
[2025-06-04 17:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:13:06] ANSI_COLOR="0;31"
[2025-06-04 17:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:13:06] HOME_URL="https://www.centos.org/"
[2025-06-04 17:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:13:06] 
[2025-06-04 17:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:13:06] 
[2025-06-04 17:13:06] 2025-06-04 21:12:51,363 | INFO     | **************************************
[2025-06-04 17:13:06] 2025-06-04 21:12:51,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 17:13:06] 2025-06-04 21:12:52,057 | INFO     | sufficient remaining disk space (105171124224 B)
[2025-06-04 17:13:06] 2025-06-04 21:12:52,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:13:06] 2025-06-04 21:12:52,057 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:13:06] 2025-06-04 21:12:52,058 | INFO     | update_server=False
[2025-06-04 17:13:06] 2025-06-04 21:12:52,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:13:06] 2025-06-04 21:12:52,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:13:06] 2025-06-04 21:12:52,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:13:06] 2025-06-04 21:12:52,217 | INFO     | aborting loop
[2025-06-04 17:13:06] 2025-06-04 21:12:52,307 | INFO     | all payload control threads have been joined
[2025-06-04 17:13:06] 2025-06-04 21:12:52,713 | INFO     | all data control threads have been joined
[2025-06-04 17:13:06] 2025-06-04 21:12:52,817 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:13:06] 2025-06-04 21:12:52,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:13:06] 2025-06-04 21:12:52,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:13:06] 2025-06-04 21:12:53,063 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,129 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,223 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,227 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,248 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,307 | INFO     | [payload] control thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,433 | INFO     | [job] validate thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,495 | INFO     | all job control threads have been joined
[2025-06-04 17:13:06] 2025-06-04 21:12:53,714 | INFO     | [data] control thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:53,891 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:54,065 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:54,085 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:54,501 | INFO     | [job] control thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:54,507 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:54,907 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:13:06] 2025-06-04 21:12:55,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:13:06] 2025-06-04 21:12:55,913 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:12:59,062 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:13:06] 2025-06-04 21:13:00,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147460892480)>', '<ExcThread(monitor, started 140147022604032)>']
[2025-06-04 17:13:06] 2025-06-04 21:13:00,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:13:06] 2025-06-04 21:13:00,864 | INFO     | [monitor] control thread has ended
[2025-06-04 17:13:06] 2025-06-04 21:13:05,040 | INFO     | all workflow threads have been joined
[2025-06-04 17:13:06] 2025-06-04 21:13:05,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:13:06] 2025-06-04 21:13:05,041 | INFO     | traces error code: 0
[2025-06-04 17:13:06] 2025-06-04 21:13:05,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:13:06] 2025-06-04 21:13:05,412 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:13:06] 2025-06-04 21:13:05,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:13:06] 2025-06-04 21:13:05,439 [wrapper] pilotpid: 65896
[2025-06-04 17:13:06] 2025-06-04 21:13:05,447 [wrapper] Pilot exit status: 0
[2025-06-04 17:13:06] 2025-06-04 21:13:05,521 [wrapper] pandaids: 6667885952
[2025-06-04 17:13:06] 2025-06-04 21:13:05,588 [wrapper] cleanup supervisor_pilot 17500 65897
[2025-06-04 17:13:06] 2025-06-04 21:13:05,592 [wrapper] Test setup, not cleaning
[2025-06-04 17:13:06] 2025-06-04 21:13:05,598 [wrapper] apfmon messages muted
[2025-06-04 17:13:06] 2025-06-04 21:13:05,604 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:13:06] 2025-06-04 21:13:05,612 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:13:06]  *** Error codes and diagnostics ***
[2025-06-04 17:13:06]     "exeErrorCode": 0,
[2025-06-04 17:13:06]     "exeErrorDiag": "",
[2025-06-04 17:13:06]     "pilotErrorCode": 0,
[2025-06-04 17:13:06]     "pilotErrorDiag": "",
[2025-06-04 17:13:06]  *** Listing of results directory ***
[2025-06-04 17:13:06] total 416900
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas    495897 May 27 22:39 pilot3.tar.gz
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas      5111 May 27 22:50 queuedata.json
[2025-06-04 17:13:06] -rwx------ 1 boincer umatlas     37140 May 27 22:57 runpilot2-wrapper.sh
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas       100 Jun  4 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:13:06] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 14:53 run_atlas
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas       105 Jun  4 14:53 job.xml
[2025-06-04 17:13:06] -rw-r--r-- 2 boincer umatlas 221616446 Jun  4 14:53 EVNT.44871834._003040.pool.root.1
[2025-06-04 17:13:06] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:53 start_atlas.sh
[2025-06-04 17:13:06] drwxrwx--x 2 boincer umatlas      4096 Jun  4 14:53 shared
[2025-06-04 17:13:06] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 14:53 input.tar.gz
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas         0 Jun  4 14:53 boinc_lockfile
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 14:53 pandaJob.out
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas    990984 Jun  4 14:53 agis_schedconf.cvmfs.json
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas   1598969 Jun  4 14:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:13:06] drwx------ 4 boincer umatlas      4096 Jun  4 14:53 pilot3
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas      6386 Jun  4 17:10 init_data.xml
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas 199254735 Jun  4 17:12 HITS.44871837._077686.pool.root.1
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas        95 Jun  4 17:12 pilot_heartbeat.json
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas       529 Jun  4 17:12 boinc_task_state.xml
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas      1089 Jun  4 17:12 memory_monitor_summary.json
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas    330628 Jun  4 17:12 log.44871837._077686.job.log.tgz.1
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas      7745 Jun  4 17:12 heartbeat.json
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 17:13 boinc_mmap_file
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas        27 Jun  4 17:13 wrapper_checkpoint.txt
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas      4354 Jun  4 17:13 pilotlog.txt
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas    770354 Jun  4 17:13 log.44871837._077686.job.log.1
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas       357 Jun  4 17:13 output.list
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas       620 Jun  4 17:13 runtime_log
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas   1116160 Jun  4 17:13 result.tar.gz
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 17:13 runtime_log.err
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas       656 Jun  4 17:13 LSSMDmh9Le7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC6aKDmZVaXnn.diag
[2025-06-04 17:13:06] -rw-r--r-- 1 boincer umatlas     20747 Jun  4 17:13 stderr.txt
[2025-06-04 17:13:06] HITS file was successfully produced:
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas 199254735 Jun  4 17:12 shared/HITS.pool.root.1
[2025-06-04 17:13:06]  *** Contents of shared directory: ***
[2025-06-04 17:13:06] total 412624
[2025-06-04 17:13:06] -rw-r--r-- 2 boincer umatlas 221616446 Jun  4 14:53 ATLAS.root_0
[2025-06-04 17:13:06] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:53 start_atlas.sh
[2025-06-04 17:13:06] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 14:53 input.tar.gz
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas 199254735 Jun  4 17:12 HITS.pool.root.1
[2025-06-04 17:13:06] -rw------- 1 boincer umatlas   1116160 Jun  4 17:13 result.tar.gz
17:13:07 (60426): run_atlas exited; CPU time 43951.479991
17:13:07 (60426): called boinc_finish(0)

</stderr_txt>
]]>

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