Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:44:32 (3495): wrapper (7.7.26015): starting
14:44:32 (3495): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:44:32] Arguments: --nthreads 8
[2025-06-04 14:44:32] Threads: 8
[2025-06-04 14:44:32] Checking for CVMFS
[2025-06-04 14:44:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:44:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:44:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:44:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:44:33] 2.11.2.0 2817 36058 79556 146791 1 1 13882278 20275200 1 130560 0 12271483 99.951 6388160 7928 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 14:44:33] CVMFS is ok
[2025-06-04 14:44:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:44:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:44:33] Further information can be found at the LHC@home message board.
[2025-06-04 14:44:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:44:33] Checking for apptainer binary...
[2025-06-04 14:44:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:44:33] Running /usr/bin/apptainer --version
[2025-06-04 14:44:33] apptainer version 1.3.2-1.el7
[2025-06-04 14:44:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:44:35] c-204-21.aglt2.org
[2025-06-04 14:44:35] apptainer works
[2025-06-04 14:44:35] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:44:35] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:44:35] Starting ATLAS job with PandaID=6679951688
[2025-06-04 14:44:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:40:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:40:48] 2025-06-04 20:40:31,986 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679951688/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:40:48] 2025-06-04 20:40:31,987 | INFO     | extracted standard info from prmon json
[2025-06-04 16:40:48] 2025-06-04 20:40:31,987 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:40:48] 2025-06-04 20:40:31,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:40:48] 2025-06-04 20:40:31,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:40:48] 2025-06-04 20:40:31,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:40:48] 2025-06-04 20:40:31,992 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:40:48] 2025-06-04 20:40:31,993 | INFO     | sum of square deviations: 459366752.5
[2025-06-04 16:40:48] 2025-06-04 20:40:31,993 | INFO     | sum of deviations: -5796398852.000013
[2025-06-04 16:40:48] 2025-06-04 20:40:31,994 | INFO     | mean x: 1749066173.5
[2025-06-04 16:40:48] 2025-06-04 20:40:31,994 | INFO     | mean y: 2486525.8771929825
[2025-06-04 16:40:48] 2025-06-04 20:40:31,994 | INFO     | -- intersect: 22072619170.375572
[2025-06-04 16:40:48] 2025-06-04 20:40:31,994 | INFO     | intersect: 22072619170.375572
[2025-06-04 16:40:48] 2025-06-04 20:40:31,995 | INFO     | chi2: 2.661035936626376
[2025-06-04 16:40:48] 2025-06-04 20:40:31,995 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 16:40:48] 2025-06-04 20:40:31,996 | INFO     | sum of deviations: 2979697683.0000005
[2025-06-04 16:40:48] 2025-06-04 20:40:31,996 | INFO     | mean x: 1749066021.0
[2025-06-04 16:40:48] 2025-06-04 20:40:31,996 | INFO     | mean y: 2508877.779816514
[2025-06-04 16:40:48] 2025-06-04 20:40:31,996 | INFO     | -- intersect: -12976963649.872337
[2025-06-04 16:40:48] 2025-06-04 20:40:31,997 | INFO     | intersect: -12976963649.872337
[2025-06-04 16:40:48] 2025-06-04 20:40:31,997 | INFO     | chi2: 1.6802894955263354
[2025-06-04 16:40:48] 2025-06-04 20:40:31,997 | INFO     | current chi2=1.6802894955263354 (change=36.85581346727009 %)
[2025-06-04 16:40:48] 2025-06-04 20:40:31,998 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 16:40:48] 2025-06-04 20:40:31,998 | INFO     | sum of deviations: 3163946291.9999995
[2025-06-04 16:40:48] 2025-06-04 20:40:31,999 | INFO     | mean x: 1749065868.5
[2025-06-04 16:40:48] 2025-06-04 20:40:31,999 | INFO     | mean y: 2509411.5576923075
[2025-06-04 16:40:48] 2025-06-04 20:40:31,999 | INFO     | -- intersect: -15864569465.774597
[2025-06-04 16:40:48] 2025-06-04 20:40:31,999 | INFO     | intersect: -15864569465.774597
[2025-06-04 16:40:48] 2025-06-04 20:40:31,999 | INFO     | chi2: 1.68325233633348
[2025-06-04 16:40:48] 2025-06-04 20:40:32,000 | INFO     | current chi2=1.68325233633348 (change=-0.1763291870259774 %)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,000 | INFO     | right removable region: 103
[2025-06-04 16:40:48] 2025-06-04 20:40:32,000 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,001 | INFO     | sum of deviations: -22850992535.0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,001 | INFO     | mean x: 1749066326.0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,001 | INFO     | mean y: 2530570.9633027525
[2025-06-04 16:40:48] 2025-06-04 20:40:32,001 | INFO     | -- intersect: 99540776766.01775
[2025-06-04 16:40:48] 2025-06-04 20:40:32,001 | INFO     | intersect: 99540776766.01775
[2025-06-04 16:40:48] 2025-06-04 20:40:32,002 | INFO     | chi2: 1.1675458707462332
[2025-06-04 16:40:48] 2025-06-04 20:40:32,002 | INFO     | current chi2=1.1675458707462332 (change=56.124385444172866 %)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,002 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,003 | INFO     | sum of deviations: -22847725466.5
[2025-06-04 16:40:48] 2025-06-04 20:40:32,003 | INFO     | mean x: 1749066478.5
[2025-06-04 16:40:48] 2025-06-04 20:40:32,003 | INFO     | mean y: 2530410.0673076925
[2025-06-04 16:40:48] 2025-06-04 20:40:32,003 | INFO     | -- intersect: 114583106412.62442
[2025-06-04 16:40:48] 2025-06-04 20:40:32,003 | INFO     | intersect: 114583106412.62442
[2025-06-04 16:40:48] 2025-06-04 20:40:32,004 | INFO     | chi2: 1.1430695789225012
[2025-06-04 16:40:48] 2025-06-04 20:40:32,004 | INFO     | current chi2=1.1430695789225012 (change=2.0963880252591762 %)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,004 | INFO     | left removable region: 20
[2025-06-04 16:40:48] 2025-06-04 20:40:32,004 | INFO     | sum of square deviations: 177275882.0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,004 | INFO     | sum of deviations: -7659781773.000001
[2025-06-04 16:40:48] 2025-06-04 20:40:32,005 | INFO     | mean x: 1749066448.0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,005 | INFO     | mean y: 2538160.8554216865
[2025-06-04 16:40:48] 2025-06-04 20:40:32,005 | INFO     | -- intersect: 75576649805.41774
[2025-06-04 16:40:48] 2025-06-04 20:40:32,005 | INFO     | intersect: 75576649805.41774
[2025-06-04 16:40:48] 2025-06-04 20:40:32,005 | INFO     | chi2: 0.082305735920185
[2025-06-04 16:40:48] 2025-06-04 20:40:32,005 | INFO     | -- intersect: 75576649805.41774
[2025-06-04 16:40:48] 2025-06-04 20:40:32,006 | INFO     | current memory leak: -43.21 B/s (using 83 data points, chi2=0.08)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,006 | INFO     | ..............................
[2025-06-04 16:40:48] 2025-06-04 20:40:32,006 | INFO     | . Timing measurements:
[2025-06-04 16:40:48] 2025-06-04 20:40:32,006 | INFO     | . get job = 0 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,006 | INFO     | . initial setup = 2 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,007 | INFO     | . payload setup = 12 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,007 | INFO     | . stage-in = 0 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,007 | INFO     | . payload execution = 6899 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,007 | INFO     | . stage-out = 0 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,007 | INFO     | . log creation = 0 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,007 | INFO     | ..............................
[2025-06-04 16:40:48] 2025-06-04 20:40:32,105 | INFO     | 
[2025-06-04 16:40:48] 2025-06-04 20:40:32,105 | INFO     | job summary report
[2025-06-04 16:40:48] 2025-06-04 20:40:32,105 | INFO     | --------------------------------------------------
[2025-06-04 16:40:48] 2025-06-04 20:40:32,105 | INFO     | PanDA job id: 6679951688
[2025-06-04 16:40:48] 2025-06-04 20:40:32,106 | INFO     | task id: 45006595
[2025-06-04 16:40:48] 2025-06-04 20:40:32,106 | INFO     | errors: (none)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:40:48] 2025-06-04 20:40:32,106 | INFO     | pilot state: finished 
[2025-06-04 16:40:48] 2025-06-04 20:40:32,106 | INFO     | transexitcode: 0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,107 | INFO     | exeerrorcode: 0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,107 | INFO     | exeerrordiag: 
[2025-06-04 16:40:48] 2025-06-04 20:40:32,107 | INFO     | exitcode: 0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,107 | INFO     | exitmsg: OK
[2025-06-04 16:40:48] 2025-06-04 20:40:32,107 | INFO     | cpuconsumptiontime: 49634 s
[2025-06-04 16:40:48] 2025-06-04 20:40:32,107 | INFO     | nevents: 400
[2025-06-04 16:40:48] 2025-06-04 20:40:32,108 | INFO     | neventsw: 0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,108 | INFO     | pid: 13817
[2025-06-04 16:40:48] 2025-06-04 20:40:32,108 | INFO     | pgrp: 13817
[2025-06-04 16:40:48] 2025-06-04 20:40:32,108 | INFO     | corecount: 8
[2025-06-04 16:40:48] 2025-06-04 20:40:32,108 | INFO     | event service: False
[2025-06-04 16:40:48] 2025-06-04 20:40:32,108 | INFO     | sizes: {0: 2397120, 1: 2397319, 7: 2397525, 12: 2397553, 6914: 2424562, 6916: 2433687, 6922: 2433801}
[2025-06-04 16:40:48] 2025-06-04 20:40:32,109 | INFO     | --------------------------------------------------
[2025-06-04 16:40:48] 2025-06-04 20:40:32,109 | INFO     | 
[2025-06-04 16:40:48] 2025-06-04 20:40:32,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 16:40:48] 2025-06-04 20:40:32,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:40:48] 2025-06-04 20:40:32,141 | INFO     | job 6679951688 has completed (purged errors)
[2025-06-04 16:40:48] 2025-06-04 20:40:32,142 | INFO     | overall cleanup function is called
[2025-06-04 16:40:48] 2025-06-04 20:40:33,148 | INFO     | --- collectZombieJob: --- 10, [13817]
[2025-06-04 16:40:48] 2025-06-04 20:40:33,148 | INFO     | zombie collector waiting for pid 13817
[2025-06-04 16:40:48] 2025-06-04 20:40:33,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:40:48] 2025-06-04 20:40:33,149 | INFO     | collected zombie processes
[2025-06-04 16:40:48] 2025-06-04 20:40:33,149 | INFO     | will attempt to kill all subprocesses of pid=13817
[2025-06-04 16:40:48] 2025-06-04 20:40:33,241 | INFO     | process IDs to be killed: [13817] (in reverse order)
[2025-06-04 16:40:48] 2025-06-04 20:40:33,300 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:40:48] 2025-06-04 20:40:33,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:40:48] 2025-06-04 20:40:33,304 | INFO     | did not find any defunct processes belonging to 13817
[2025-06-04 16:40:48] 2025-06-04 20:40:33,308 | INFO     | did not find any defunct processes belonging to 13817
[2025-06-04 16:40:48] 2025-06-04 20:40:33,308 | INFO     | ready for new job
[2025-06-04 16:40:48] 2025-06-04 20:40:33,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:40:48] 2025-06-04 20:40:33,310 | INFO     | **************************************
[2025-06-04 16:40:48] 2025-06-04 20:40:33,310 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:40:48] 2025-06-04 20:40:33,310 | INFO     | **************************************
[2025-06-04 16:40:48] 2025-06-04 20:40:33,310 | INFO     | 
[2025-06-04 16:40:48] 2025-06-04 20:40:33,311 | INFO     | architecture information:
[2025-06-04 16:40:48] 2025-06-04 20:40:33,312 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:40:48] 2025-06-04 20:40:33,331 | INFO     | cat /etc/os-release:
[2025-06-04 16:40:48] NAME="CentOS Linux"
[2025-06-04 16:40:48] VERSION="7 (Core)"
[2025-06-04 16:40:48] ID="centos"
[2025-06-04 16:40:48] ID_LIKE="rhel fedora"
[2025-06-04 16:40:48] VERSION_ID="7"
[2025-06-04 16:40:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:40:48] ANSI_COLOR="0;31"
[2025-06-04 16:40:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:40:48] HOME_URL="https://www.centos.org/"
[2025-06-04 16:40:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:40:48] 
[2025-06-04 16:40:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:40:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:40:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:40:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:40:48] 
[2025-06-04 16:40:48] 2025-06-04 20:40:33,332 | INFO     | **************************************
[2025-06-04 16:40:48] 2025-06-04 20:40:33,835 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 16:40:48] 2025-06-04 20:40:33,856 | INFO     | sufficient remaining disk space (18603835392 B)
[2025-06-04 16:40:48] 2025-06-04 20:40:33,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:40:48] 2025-06-04 20:40:33,857 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:40:48] 2025-06-04 20:40:33,857 | INFO     | update_server=False
[2025-06-04 16:40:48] 2025-06-04 20:40:33,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:40:48] 2025-06-04 20:40:33,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:40:48] 2025-06-04 20:40:33,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:40:48] 2025-06-04 20:40:33,859 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:40:48] 2025-06-04 20:40:33,860 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:40:48] 2025-06-04 20:40:33,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:40:48] 2025-06-04 20:40:33,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:40:48] 2025-06-04 20:40:34,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:40:48] 2025-06-04 20:40:34,153 | INFO     | aborting loop
[2025-06-04 16:40:48] 2025-06-04 20:40:34,324 | INFO     | all job control threads have been joined
[2025-06-04 16:40:48] 2025-06-04 20:40:34,395 | INFO     | all data control threads have been joined
[2025-06-04 16:40:48] 2025-06-04 20:40:34,860 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:34,864 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:34,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:34,944 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,159 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,160 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,297 | INFO     | [job] validate thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,324 | INFO     | all payload control threads have been joined
[2025-06-04 16:40:48] 2025-06-04 20:40:35,329 | INFO     | [job] control thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,399 | INFO     | [data] control thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,746 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,823 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,834 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,835 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:35,860 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:36,329 | INFO     | [payload] control thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:36,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:40:48] 2025-06-04 20:40:40,912 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:40:48] 2025-06-04 20:40:42,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906947405632)>', '<ExcThread(monitor, started 139906051458816)>']
[2025-06-04 16:40:48] 2025-06-04 20:40:42,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:40:48] 2025-06-04 20:40:42,907 | INFO     | [monitor] control thread has ended
[2025-06-04 16:40:48] 2025-06-04 20:40:47,671 | INFO     | all workflow threads have been joined
[2025-06-04 16:40:48] 2025-06-04 20:40:47,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:40:48] 2025-06-04 20:40:47,672 | INFO     | traces error code: 0
[2025-06-04 16:40:48] 2025-06-04 20:40:47,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:40:48] 2025-06-04 20:40:47,783 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:40:48] 2025-06-04 20:40:47,788 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:40:48] 2025-06-04 20:40:47,792 [wrapper] pilotpid: 7172
[2025-06-04 16:40:48] 2025-06-04 20:40:47,797 [wrapper] Pilot exit status: 0
[2025-06-04 16:40:48] 2025-06-04 20:40:47,818 [wrapper] pandaids: 6679951688
[2025-06-04 16:40:48] 2025-06-04 20:40:47,862 [wrapper] cleanup supervisor_pilot 20178 7173
[2025-06-04 16:40:48] 2025-06-04 20:40:47,867 [wrapper] Test setup, not cleaning
[2025-06-04 16:40:48] 2025-06-04 20:40:47,872 [wrapper] apfmon messages muted
[2025-06-04 16:40:48] 2025-06-04 20:40:47,877 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:40:48] 2025-06-04 20:40:47,883 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:40:48]  *** Error codes and diagnostics ***
[2025-06-04 16:40:48]     "exeErrorCode": 0,
[2025-06-04 16:40:48]     "exeErrorDiag": "",
[2025-06-04 16:40:48]     "pilotErrorCode": 0,
[2025-06-04 16:40:48]     "pilotErrorDiag": "",
[2025-06-04 16:40:48]  *** Listing of results directory ***
[2025-06-04 16:40:48] total 392984
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 14:17 pilot3.tar.gz
[2025-06-04 16:40:48] -rwx------ 1 boincer umatlas     37140 Jun  4 14:44 runpilot2-wrapper.sh
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 14:44 queuedata.json
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas       100 Jun  4 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:40:48] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 14:44 run_atlas
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas       105 Jun  4 14:44 job.xml
[2025-06-04 16:40:48] -rw-r--r-- 2 boincer umatlas 214788916 Jun  4 14:44 EVNT.45006593._002049.pool.root.1
[2025-06-04 16:40:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:44 start_atlas.sh
[2025-06-04 16:40:48] drwxrwx--x 2 boincer umatlas      4096 Jun  4 14:44 shared
[2025-06-04 16:40:48] -rw-r--r-- 2 boincer umatlas    508890 Jun  4 14:44 input.tar.gz
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas         0 Jun  4 14:44 boinc_lockfile
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 14:44 pandaJob.out
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas    990984 Jun  4 14:44 agis_schedconf.cvmfs.json
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas   1598969 Jun  4 14:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:40:48] drwx------ 4 boincer umatlas      4096 Jun  4 14:44 pilot3
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 16:39 init_data.xml
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas 181867412 Jun  4 16:39 HITS.45006595._056878.pool.root.1
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas       529 Jun  4 16:40 boinc_task_state.xml
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas      1048 Jun  4 16:40 memory_monitor_summary.json
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas        95 Jun  4 16:40 pilot_heartbeat.json
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas    331612 Jun  4 16:40 log.45006595._056878.job.log.tgz.1
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas      7750 Jun  4 16:40 heartbeat.json
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas        27 Jun  4 16:40 wrapper_checkpoint.txt
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 16:40 boinc_mmap_file
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas      4476 Jun  4 16:40 pilotlog.txt
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas    637404 Jun  4 16:40 log.45006595._056878.job.log.1
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas       357 Jun  4 16:40 output.list
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas       620 Jun  4 16:40 runtime_log
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas    983040 Jun  4 16:40 result.tar.gz
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 16:40 runtime_log.err
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas       659 Jun  4 16:40 J29MDmzG8g7n9Rq4apOajLDm4fhM0noT9bVof3QYDm73aKDmfH0fSm.diag
[2025-06-04 16:40:48] -rw-r--r-- 1 boincer umatlas     20808 Jun  4 16:40 stderr.txt
[2025-06-04 16:40:48] HITS file was successfully produced:
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas 181867412 Jun  4 16:39 shared/HITS.pool.root.1
[2025-06-04 16:40:48]  *** Contents of shared directory: ***
[2025-06-04 16:40:48] total 388840
[2025-06-04 16:40:48] -rw-r--r-- 2 boincer umatlas 214788916 Jun  4 14:44 ATLAS.root_0
[2025-06-04 16:40:48] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:44 start_atlas.sh
[2025-06-04 16:40:48] -rw-r--r-- 2 boincer umatlas    508890 Jun  4 14:44 input.tar.gz
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas 181867412 Jun  4 16:39 HITS.pool.root.1
[2025-06-04 16:40:48] -rw------- 1 boincer umatlas    983040 Jun  4 16:40 result.tar.gz
16:40:49 (3495): run_atlas exited; CPU time 49582.458985
16:40:49 (3495): called boinc_finish(0)

</stderr_txt>
]]>

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