Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:33:04 (26590): wrapper (7.7.26015): starting
14:33:04 (26590): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 14:33:04] Arguments: --nthreads 12
[2025-06-04 14:33:04] Threads: 12
[2025-06-04 14:33:04] Checking for CVMFS
[2025-06-04 14:33:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:33:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:33:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:33:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:33:04] 2.11.2.0 2913 36047 86600 146791 1 58 18909778 20275200 1 130560 0 16294113 99.983 6490533 7795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 14:33:04] CVMFS is ok
[2025-06-04 14:33:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:33:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:33:04] Further information can be found at the LHC@home message board.
[2025-06-04 14:33:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:33:04] Checking for apptainer binary...
[2025-06-04 14:33:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:33:04] Running /usr/bin/apptainer --version
[2025-06-04 14:33:04] apptainer version 1.3.2-1.el7
[2025-06-04 14:33:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:33:06] c-205-6.aglt2.org
[2025-06-04 14:33:06] apptainer works
[2025-06-04 14:33:06] Set ATHENA_PROC_NUMBER=12
[2025-06-04 14:33:06] Set ATHENA_CORE_NUMBER=12
[2025-06-04 14:33:06] Starting ATLAS job with PandaID=6665728255
[2025-06-04 14:33:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:04:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:04:45]  protocol_id=None
[2025-06-04 16:04:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 16:04:45]  replicas=None
[2025-06-04 16:04:45]  scope=mc23_13p6TeV
[2025-06-04 16:04:45]  status=None
[2025-06-04 16:04:45]  status_code=0
[2025-06-04 16:04:45]  storage_token=
[2025-06-04 16:04:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6665728255/log.44871837._034583.job.log.tgz.1
[2025-06-04 16:04:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/14/log.44871837._034583.job.log.tgz.1
[2025-06-04 16:04:45]  workdir=None
[2025-06-04 16:04:45] ]
[2025-06-04 16:04:45] 2025-06-04 20:04:16,061 | INFO     | transferring file log.44871837._034583.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6665728255/log.44871837._034583.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 16:04:45] 2025-06-04 20:04:16,061 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6665728255/log.44871837._034583.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._034583.job
[2025-06-04 16:04:45] 2025-06-04 20:04:16,081 | INFO     | adding to output.list: log.44871837._034583.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/14/log.44871837._034583.job.log.tg
[2025-06-04 16:04:45] 2025-06-04 20:04:16,082 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:04:45] 2025-06-04 20:04:16,082 | INFO     | summary of transferred files:
[2025-06-04 16:04:45] 2025-06-04 20:04:16,082 | INFO     |  -- lfn=log.44871837._034583.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:04:45] 2025-06-04 20:04:16,083 | INFO     | stage-out finished correctly
[2025-06-04 16:04:45] 2025-06-04 20:04:17,880 | INFO     | monitor loop #407: job 0:6665728255 is in state 'finished'
[2025-06-04 16:04:45] 2025-06-04 20:04:17,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:04:45] 2025-06-04 20:04:18,461 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:04:45] 2025-06-04 20:04:19,319 | INFO     | PID=30179 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 16:04:45] 2025-06-04 20:04:20,332 | INFO     | job 6665728255 has state=finished
[2025-06-04 16:04:45] 2025-06-04 20:04:20,332 | INFO     | preparing for final server update for job 6665728255 in state='finished'
[2025-06-04 16:04:45] 2025-06-04 20:04:20,344 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:04:45] 2025-06-04 20:04:20,344 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:04:45] 2025-06-04 20:04:20,344 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:04:45] 2025-06-04 20:04:20,344 | INFO     | job 6665728255 has finished - writing final server update
[2025-06-04 16:04:45] 2025-06-04 20:04:20,345 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:04:45] 2025-06-04 20:04:20,346 | INFO     | executing command: lscpu
[2025-06-04 16:04:45] 2025-06-04 20:04:20,375 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:04:45] 2025-06-04 20:04:20,384 | INFO     | monitor loop #408: job 0:6665728255 is in state 'finished'
[2025-06-04 16:04:45] 2025-06-04 20:04:20,384 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:04:45] 2025-06-04 20:04:22,887 | INFO     | monitor loop #409: job 0:6665728255 is in state 'finished'
[2025-06-04 16:04:45] 2025-06-04 20:04:22,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:04:45] 2025-06-04 20:04:25,390 | INFO     | monitor loop #410: job 0:6665728255 is in state 'finished'
[2025-06-04 16:04:45] 2025-06-04 20:04:25,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:04:45] 2025-06-04 20:04:25,923 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 16:04:45] 2025-06-04 20:04:25,923 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6665728255/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:04:45] 2025-06-04 20:04:25,924 | INFO     | extracted standard info from prmon json
[2025-06-04 16:04:45] 2025-06-04 20:04:25,924 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:04:45] 2025-06-04 20:04:25,925 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:04:45] 2025-06-04 20:04:25,925 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:04:45] 2025-06-04 20:04:25,925 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:04:45] 2025-06-04 20:04:25,928 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:04:45] 2025-06-04 20:04:25,928 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 16:04:45] 2025-06-04 20:04:25,929 | INFO     | sum of deviations: -10834241964.0
[2025-06-04 16:04:45] 2025-06-04 20:04:25,929 | INFO     | mean x: 1749064805.5
[2025-06-04 16:04:45] 2025-06-04 20:04:25,929 | INFO     | mean y: 2794621.7804878047
[2025-06-04 16:04:45] 2025-06-04 20:04:25,929 | INFO     | -- intersect: 110856201269.76407
[2025-06-04 16:04:45] 2025-06-04 20:04:25,929 | INFO     | intersect: 110856201269.76407
[2025-06-04 16:04:45] 2025-06-04 20:04:25,929 | INFO     | chi2: 0.09543680568587298
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | -- intersect: 110856201269.76407
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | current memory leak: -63.38 B/s (using 82 data points, chi2=0.10)
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | ..............................
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | . Timing measurements:
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | . get job = 0 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | . initial setup = 2 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,930 | INFO     | . payload setup = 9 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,931 | INFO     | . stage-in = 0 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,931 | INFO     | . payload execution = 5427 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,931 | INFO     | . stage-out = 0 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,931 | INFO     | . log creation = 0 s
[2025-06-04 16:04:45] 2025-06-04 20:04:25,931 | INFO     | ..............................
[2025-06-04 16:04:45] 2025-06-04 20:04:26,015 | INFO     | 
[2025-06-04 16:04:45] 2025-06-04 20:04:26,015 | INFO     | job summary report
[2025-06-04 16:04:45] 2025-06-04 20:04:26,015 | INFO     | --------------------------------------------------
[2025-06-04 16:04:45] 2025-06-04 20:04:26,015 | INFO     | PanDA job id: 6665728255
[2025-06-04 16:04:45] 2025-06-04 20:04:26,015 | INFO     | task id: 44871837
[2025-06-04 16:04:45] 2025-06-04 20:04:26,016 | INFO     | errors: (none)
[2025-06-04 16:04:45] 2025-06-04 20:04:26,016 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:04:45] 2025-06-04 20:04:26,016 | INFO     | pilot state: finished 
[2025-06-04 16:04:45] 2025-06-04 20:04:26,016 | INFO     | transexitcode: 0
[2025-06-04 16:04:45] 2025-06-04 20:04:26,016 | INFO     | exeerrorcode: 0
[2025-06-04 16:04:45] 2025-06-04 20:04:26,016 | INFO     | exeerrordiag: 
[2025-06-04 16:04:45] 2025-06-04 20:04:26,017 | INFO     | exitcode: 0
[2025-06-04 16:04:45] 2025-06-04 20:04:26,017 | INFO     | exitmsg: OK
[2025-06-04 16:04:45] 2025-06-04 20:04:26,017 | INFO     | cpuconsumptiontime: 58893 s
[2025-06-04 16:04:45] 2025-06-04 20:04:26,017 | INFO     | nevents: 400
[2025-06-04 16:04:45] 2025-06-04 20:04:26,017 | INFO     | neventsw: 0
[2025-06-04 16:04:45] 2025-06-04 20:04:26,017 | INFO     | pid: 4316
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | pgrp: 4316
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | corecount: 12
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | event service: False
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 5440: 2424068, 5441: 2433009, 5444: 2433193, 5451: 2433363}
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | --------------------------------------------------
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | 
[2025-06-04 16:04:45] 2025-06-04 20:04:26,018 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 16:04:45] 2025-06-04 20:04:26,040 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,040 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,041 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,041 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,041 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,041 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,041 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,041 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,042 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,042 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,042 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:04:45] 2025-06-04 20:04:26,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:04:45] 2025-06-04 20:04:26,044 | INFO     | job 6665728255 has completed (purged errors)
[2025-06-04 16:04:45] 2025-06-04 20:04:26,044 | INFO     | overall cleanup function is called
[2025-06-04 16:04:45] 2025-06-04 20:04:27,052 | INFO     | --- collectZombieJob: --- 10, [4316]
[2025-06-04 16:04:45] 2025-06-04 20:04:27,052 | INFO     | zombie collector waiting for pid 4316
[2025-06-04 16:04:45] 2025-06-04 20:04:27,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:04:45] 2025-06-04 20:04:27,053 | INFO     | collected zombie processes
[2025-06-04 16:04:45] 2025-06-04 20:04:27,053 | INFO     | will attempt to kill all subprocesses of pid=4316
[2025-06-04 16:04:45] 2025-06-04 20:04:27,145 | INFO     | process IDs to be killed: [4316] (in reverse order)
[2025-06-04 16:04:45] 2025-06-04 20:04:27,191 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:04:45] 2025-06-04 20:04:27,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:04:45] 2025-06-04 20:04:27,195 | INFO     | did not find any defunct processes belonging to 4316
[2025-06-04 16:04:45] 2025-06-04 20:04:27,198 | INFO     | did not find any defunct processes belonging to 4316
[2025-06-04 16:04:45] 2025-06-04 20:04:27,199 | INFO     | ready for new job
[2025-06-04 16:04:45] 2025-06-04 20:04:27,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:04:45] 2025-06-04 20:04:27,200 | INFO     | **************************************
[2025-06-04 16:04:45] 2025-06-04 20:04:27,200 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:04:45] 2025-06-04 20:04:27,200 | INFO     | **************************************
[2025-06-04 16:04:45] 2025-06-04 20:04:27,200 | INFO     | 
[2025-06-04 16:04:45] 2025-06-04 20:04:27,201 | INFO     | architecture information:
[2025-06-04 16:04:45] 2025-06-04 20:04:27,201 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:04:45] 2025-06-04 20:04:27,215 | INFO     | cat /etc/os-release:
[2025-06-04 16:04:45] NAME="CentOS Linux"
[2025-06-04 16:04:45] VERSION="7 (Core)"
[2025-06-04 16:04:45] ID="centos"
[2025-06-04 16:04:45] ID_LIKE="rhel fedora"
[2025-06-04 16:04:45] VERSION_ID="7"
[2025-06-04 16:04:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:04:45] ANSI_COLOR="0;31"
[2025-06-04 16:04:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:04:45] HOME_URL="https://www.centos.org/"
[2025-06-04 16:04:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:04:45] 
[2025-06-04 16:04:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:04:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:04:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:04:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:04:45] 
[2025-06-04 16:04:45] 2025-06-04 20:04:27,215 | INFO     | **************************************
[2025-06-04 16:04:45] 2025-06-04 20:04:27,718 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 16:04:45] 2025-06-04 20:04:27,734 | INFO     | sufficient remaining disk space (29384245248 B)
[2025-06-04 16:04:45] 2025-06-04 20:04:27,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:04:45] 2025-06-04 20:04:27,734 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:04:45] 2025-06-04 20:04:27,735 | INFO     | update_server=False
[2025-06-04 16:04:45] 2025-06-04 20:04:27,735 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:04:45] 2025-06-04 20:04:27,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:04:45] 2025-06-04 20:04:27,735 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:04:45] 2025-06-04 20:04:27,736 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:04:45] 2025-06-04 20:04:27,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:04:45] 2025-06-04 20:04:27,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:04:45] 2025-06-04 20:04:27,899 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 16:04:45] 2025-06-04 20:04:27,899 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 16:04:45] 2025-06-04 20:04:27,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:04:45] 2025-06-04 20:04:27,899 | INFO     | will abort loop
[2025-06-04 16:04:45] 2025-06-04 20:04:28,216 | INFO     | all data control threads have been joined
[2025-06-04 16:04:45] 2025-06-04 20:04:28,740 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:28,741 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:28,826 | INFO     | all job control threads have been joined
[2025-06-04 16:04:45] 2025-06-04 20:04:28,905 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,028 | INFO     | all payload control threads have been joined
[2025-06-04 16:04:45] 2025-06-04 20:04:29,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:04:45] 2025-06-04 20:04:29,053 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,076 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:04:45] 2025-06-04 20:04:29,221 | INFO     | [data] control thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,252 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,667 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,733 | INFO     | [job] validate thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:29,831 | INFO     | [job] control thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:30,033 | INFO     | [payload] control thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:30,075 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:30,082 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:31,188 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:33,058 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:38,762 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:04:45] 2025-06-04 20:04:39,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:04:45] 2025-06-04 20:04:40,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126533109568)>', '<ExcThread(monitor, started 140125539374848)>']
[2025-06-04 16:04:45] 2025-06-04 20:04:40,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:04:45] 2025-06-04 20:04:40,800 | INFO     | [monitor] control thread has ended
[2025-06-04 16:04:45] 2025-06-04 20:04:45,062 | INFO     | all workflow threads have been joined
[2025-06-04 16:04:45] 2025-06-04 20:04:45,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:04:45] 2025-06-04 20:04:45,062 | INFO     | traces error code: 0
[2025-06-04 16:04:45] 2025-06-04 20:04:45,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:04:45] 2025-06-04 20:04:45,146 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:04:45] 2025-06-04 20:04:45,150 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:04:45] 2025-06-04 20:04:45,153 [wrapper] pilotpid: 30179
[2025-06-04 16:04:45] 2025-06-04 20:04:45,157 [wrapper] Pilot exit status: 0
[2025-06-04 16:04:45] 2025-06-04 20:04:45,173 [wrapper] pandaids: 6665728255
[2025-06-04 16:04:45] 2025-06-04 20:04:45,209 [wrapper] cleanup supervisor_pilot 19905 30180
[2025-06-04 16:04:45] 2025-06-04 20:04:45,213 [wrapper] Test setup, not cleaning
[2025-06-04 16:04:45] 2025-06-04 20:04:45,217 [wrapper] apfmon messages muted
[2025-06-04 16:04:45] 2025-06-04 20:04:45,221 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:04:45] 2025-06-04 20:04:45,225 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:04:45]  *** Error codes and diagnostics ***
[2025-06-04 16:04:45]     "exeErrorCode": 0,
[2025-06-04 16:04:45]     "exeErrorDiag": "",
[2025-06-04 16:04:45]     "pilotErrorCode": 0,
[2025-06-04 16:04:45]     "pilotErrorDiag": "",
[2025-06-04 16:04:45]  *** Listing of results directory ***
[2025-06-04 16:04:45] total 416592
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas    495897 May 25 08:17 pilot3.tar.gz
[2025-06-04 16:04:45] -rwx------ 1 boincer umatlas     37140 May 25 08:38 runpilot2-wrapper.sh
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas      5111 May 25 08:38 queuedata.json
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:04:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 14:33 run_atlas
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 14:33 job.xml
[2025-06-04 16:04:45] -rw-r--r-- 2 boincer umatlas 224018331 Jun  4 14:33 EVNT.44871834._001379.pool.root.1
[2025-06-04 16:04:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:33 start_atlas.sh
[2025-06-04 16:04:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 14:33 shared
[2025-06-04 16:04:45] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 14:33 input.tar.gz
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 14:33 boinc_lockfile
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 14:33 pandaJob.out
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas    990984 Jun  4 14:33 agis_schedconf.cvmfs.json
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas   1598969 Jun  4 14:33 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:04:45] drwx------ 4 boincer umatlas      4096 Jun  4 14:33 pilot3
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 16:02 init_data.xml
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas        95 Jun  4 16:03 pilot_heartbeat.json
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas 196974537 Jun  4 16:03 HITS.44871837._034583.pool.root.1
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 16:03 boinc_task_state.xml
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas      1047 Jun  4 16:04 memory_monitor_summary.json
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas    374047 Jun  4 16:04 log.44871837._034583.job.log.tgz.1
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas      7753 Jun  4 16:04 heartbeat.json
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 16:04 boinc_mmap_file
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 16:04 wrapper_checkpoint.txt
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas      4734 Jun  4 16:04 pilotlog.txt
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas    511396 Jun  4 16:04 log.44871837._034583.job.log.1
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas       357 Jun  4 16:04 output.list
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 16:04 runtime_log
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas    901120 Jun  4 16:04 result.tar.gz
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas       658 Jun  4 16:04 wsyNDmQnPd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUVOKDmMqnrvn.diag
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 16:04 runtime_log.err
[2025-06-04 16:04:45] -rw-r--r-- 1 boincer umatlas     21799 Jun  4 16:04 stderr.txt
[2025-06-04 16:04:45] HITS file was successfully produced:
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas 196974537 Jun  4 16:03 shared/HITS.pool.root.1
[2025-06-04 16:04:45]  *** Contents of shared directory: ***
[2025-06-04 16:04:45] total 412528
[2025-06-04 16:04:45] -rw-r--r-- 2 boincer umatlas 224018331 Jun  4 14:33 ATLAS.root_0
[2025-06-04 16:04:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:33 start_atlas.sh
[2025-06-04 16:04:45] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 14:33 input.tar.gz
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas 196974537 Jun  4 16:03 HITS.pool.root.1
[2025-06-04 16:04:45] -rw------- 1 boincer umatlas    901120 Jun  4 16:04 result.tar.gz
16:04:46 (26590): run_atlas exited; CPU time 58874.033468
16:04:46 (26590): called boinc_finish(0)

</stderr_txt>
]]>

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