Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:15:53 (29235): wrapper (7.7.26015): starting
14:15:53 (29235): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 14:15:54] Arguments: --nthreads 10
[2025-06-04 14:15:54] Threads: 10
[2025-06-04 14:15:54] Checking for CVMFS
[2025-06-04 14:15:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:15:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:15:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:15:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:15:56] 2.11.2.0 13662 109039 238764 146790 0 130 10480059 18432001 19099 130560 0 505211910 99.097 1004885058 35541 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 14:15:56] CVMFS is ok
[2025-06-04 14:15:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:15:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:15:56] Further information can be found at the LHC@home message board.
[2025-06-04 14:15:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:15:56] Checking for apptainer binary...
[2025-06-04 14:15:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:15:56] Running /usr/bin/apptainer --version
[2025-06-04 14:15:56] apptainer version 1.3.2-1.el7
[2025-06-04 14:15:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:16:14] c-210-25.aglt2.org
[2025-06-04 14:16:14] apptainer works
[2025-06-04 14:16:14] Set ATHENA_PROC_NUMBER=10
[2025-06-04 14:16:14] Set ATHENA_CORE_NUMBER=10
[2025-06-04 14:16:14] Starting ATLAS job with PandaID=6679930012
[2025-06-04 14:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:43:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:43:26] 2025-06-04 22:43:07,505 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679930012/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:43:26] 2025-06-04 22:43:07,555 | INFO     | extracted standard info from prmon json
[2025-06-04 18:43:26] 2025-06-04 22:43:07,556 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:43:26] 2025-06-04 22:43:07,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:43:26] 2025-06-04 22:43:07,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:43:26] 2025-06-04 22:43:07,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:43:26] 2025-06-04 22:43:07,605 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:43:26] 2025-06-04 22:43:07,606 | INFO     | sum of square deviations: 5202328828.984375
[2025-06-04 18:43:26] 2025-06-04 22:43:07,622 | INFO     | sum of deviations: 56760780756.88281
[2025-06-04 18:43:26] 2025-06-04 22:43:07,634 | INFO     | mean x: 1749069116.7421875
[2025-06-04 18:43:26] 2025-06-04 22:43:07,634 | INFO     | mean y: 2537152.81640625
[2025-06-04 18:43:26] 2025-06-04 22:43:07,635 | INFO     | -- intersect: -19080941021.595654
[2025-06-04 18:43:26] 2025-06-04 22:43:07,635 | INFO     | intersect: -19080941021.595654
[2025-06-04 18:43:26] 2025-06-04 22:43:07,635 | INFO     | chi2: 6.459770375288577
[2025-06-04 18:43:26] 2025-06-04 22:43:07,636 | INFO     | sum of square deviations: 4903439808.685221
[2025-06-04 18:43:26] 2025-06-04 22:43:07,651 | INFO     | sum of deviations: 72965805509.44228
[2025-06-04 18:43:26] 2025-06-04 22:43:07,651 | INFO     | mean x: 1749068964.247012
[2025-06-04 18:43:26] 2025-06-04 22:43:07,651 | INFO     | mean y: 2545280.589641434
[2025-06-04 18:43:26] 2025-06-04 22:43:07,651 | INFO     | -- intersect: -26024535880.231007
[2025-06-04 18:43:26] 2025-06-04 22:43:07,652 | INFO     | intersect: -26024535880.231007
[2025-06-04 18:43:26] 2025-06-04 22:43:07,653 | INFO     | chi2: 5.7359357290310955
[2025-06-04 18:43:26] 2025-06-04 22:43:07,653 | INFO     | current chi2=5.7359357290310955 (change=11.205268983344405 %)
[2025-06-04 18:43:26] 2025-06-04 22:43:07,654 | INFO     | right removable region: 250
[2025-06-04 18:43:26] 2025-06-04 22:43:07,654 | INFO     | sum of square deviations: 4903401988.685219
[2025-06-04 18:43:26] 2025-06-04 22:43:07,670 | INFO     | sum of deviations: -30685459825.513927
[2025-06-04 18:43:26] 2025-06-04 22:43:07,670 | INFO     | mean x: 1749069269.247012
[2025-06-04 18:43:26] 2025-06-04 22:43:07,670 | INFO     | mean y: 2581718.314741036
[2025-06-04 18:43:26] 2025-06-04 22:43:07,671 | INFO     | -- intersect: 10948246568.42656
[2025-06-04 18:43:26] 2025-06-04 22:43:07,671 | INFO     | intersect: 10948246568.42656
[2025-06-04 18:43:26] 2025-06-04 22:43:07,688 | INFO     | chi2: 2.1237368483834196
[2025-06-04 18:43:26] 2025-06-04 22:43:07,689 | INFO     | current chi2=2.1237368483834196 (change=67.12364797814433 %)
[2025-06-04 18:43:26] 2025-06-04 22:43:07,689 | INFO     | sum of square deviations: 4616149785.873954
[2025-06-04 18:43:26] 2025-06-04 22:43:07,696 | INFO     | sum of deviations: -70319712798.52847
[2025-06-04 18:43:26] 2025-06-04 22:43:07,696 | INFO     | mean x: 1749069421.7520325
[2025-06-04 18:43:26] 2025-06-04 22:43:07,696 | INFO     | mean y: 2602658.0569105693
[2025-06-04 18:43:26] 2025-06-04 22:43:07,696 | INFO     | -- intersect: 26646898252.33545
[2025-06-04 18:43:26] 2025-06-04 22:43:07,696 | INFO     | intersect: 26646898252.33545
[2025-06-04 18:43:26] 2025-06-04 22:43:07,697 | INFO     | chi2: 1.0651947042195582
[2025-06-04 18:43:26] 2025-06-04 22:43:07,697 | INFO     | current chi2=1.0651947042195582 (change=49.843376074094095 %)
[2025-06-04 18:43:26] 2025-06-04 22:43:07,698 | INFO     | sum of square deviations: 4340339658.049809
[2025-06-04 18:43:26] 2025-06-04 22:43:07,726 | INFO     | sum of deviations: -75551485950.49791
[2025-06-04 18:43:26] 2025-06-04 22:43:07,727 | INFO     | mean x: 1749069574.2572615
[2025-06-04 18:43:26] 2025-06-04 22:43:07,727 | INFO     | mean y: 2605501.4273858923
[2025-06-04 18:43:26] 2025-06-04 22:43:07,727 | INFO     | -- intersect: 30448334586.444622
[2025-06-04 18:43:26] 2025-06-04 22:43:07,727 | INFO     | intersect: 30448334586.444622
[2025-06-04 18:43:26] 2025-06-04 22:43:07,727 | INFO     | chi2: 0.9944058899919179
[2025-06-04 18:43:26] 2025-06-04 22:43:07,728 | INFO     | current chi2=0.9944058899919179 (change=6.645622058317074 %)
[2025-06-04 18:43:26] 2025-06-04 22:43:07,728 | INFO     | left removable region: 30
[2025-06-04 18:43:26] 2025-06-04 22:43:07,728 | INFO     | sum of square deviations: 3301723642.2318335
[2025-06-04 18:43:26] 2025-06-04 22:43:07,755 | INFO     | sum of deviations: -36637229827.21365
[2025-06-04 18:43:26] 2025-06-04 22:43:07,755 | INFO     | mean x: 1749069848.759091
[2025-06-04 18:43:26] 2025-06-04 22:43:07,755 | INFO     | mean y: 2602472.731818182
[2025-06-04 18:43:26] 2025-06-04 22:43:07,755 | INFO     | -- intersect: 19410972456.57468
[2025-06-04 18:43:26] 2025-06-04 22:43:07,755 | INFO     | intersect: 19410972456.57468
[2025-06-04 18:43:26] 2025-06-04 22:43:07,756 | INFO     | chi2: 0.17396016643888484
[2025-06-04 18:43:26] 2025-06-04 22:43:07,756 | INFO     | -- intersect: 19410972456.57468
[2025-06-04 18:43:26] 2025-06-04 22:43:07,756 | INFO     | current memory leak: -11.10 B/s (using 220 data points, chi2=0.17)
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | ..............................
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | . Timing measurements:
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | . get job = 0 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | . initial setup = 4 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | . payload setup = 93 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | . stage-in = 0 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,757 | INFO     | . payload execution = 15644 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,758 | INFO     | . stage-out = 4 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,758 | INFO     | . log creation = 0 s
[2025-06-04 18:43:26] 2025-06-04 22:43:07,758 | INFO     | ..............................
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | 
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | job summary report
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | --------------------------------------------------
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | PanDA job id: 6679930012
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | task id: 45006595
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | errors: (none)
[2025-06-04 18:43:26] 2025-06-04 22:43:08,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | pilot state: finished 
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | transexitcode: 0
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | exeerrorcode: 0
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | exeerrordiag: 
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | exitcode: 0
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | exitmsg: OK
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | cpuconsumptiontime: 46253 s
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | nevents: 400
[2025-06-04 18:43:26] 2025-06-04 22:43:08,048 | INFO     | neventsw: 0
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | pid: 23533
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | pgrp: 23533
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | corecount: 10
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | event service: False
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | sizes: {0: 2396411, 1: 2397096, 2: 2397295, 12: 2397295, 23: 2397323, 34: 2397351, 45: 2397507, 50: 2397741, 55: 2397769, 15742: 2428663, 15747: 2437604, 15750: 24
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | --------------------------------------------------
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | 
[2025-06-04 18:43:26] 2025-06-04 22:43:08,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 18:43:26] 2025-06-04 22:43:08,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,313 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,313 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:43:26] 2025-06-04 22:43:08,313 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,313 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:43:26] 2025-06-04 22:43:08,315 | INFO     | job 6679930012 has completed (purged errors)
[2025-06-04 18:43:26] 2025-06-04 22:43:08,316 | INFO     | overall cleanup function is called
[2025-06-04 18:43:26] 2025-06-04 22:43:09,336 | INFO     | --- collectZombieJob: --- 10, [23533]
[2025-06-04 18:43:26] 2025-06-04 22:43:09,336 | INFO     | zombie collector waiting for pid 23533
[2025-06-04 18:43:26] 2025-06-04 22:43:09,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:43:26] 2025-06-04 22:43:09,337 | INFO     | collected zombie processes
[2025-06-04 18:43:26] 2025-06-04 22:43:09,337 | INFO     | will attempt to kill all subprocesses of pid=23533
[2025-06-04 18:43:26] 2025-06-04 22:43:10,518 | INFO     | process IDs to be killed: [23533] (in reverse order)
[2025-06-04 18:43:26] 2025-06-04 22:43:10,787 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:43:26] 2025-06-04 22:43:10,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:43:26] 2025-06-04 22:43:10,799 | INFO     | did not find any defunct processes belonging to 23533
[2025-06-04 18:43:26] 2025-06-04 22:43:10,810 | INFO     | did not find any defunct processes belonging to 23533
[2025-06-04 18:43:26] 2025-06-04 22:43:10,810 | INFO     | ready for new job
[2025-06-04 18:43:26] 2025-06-04 22:43:10,811 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:43:26] 2025-06-04 22:43:10,813 | INFO     | **************************************
[2025-06-04 18:43:26] 2025-06-04 22:43:10,813 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:43:26] 2025-06-04 22:43:10,813 | INFO     | **************************************
[2025-06-04 18:43:26] 2025-06-04 22:43:10,813 | INFO     | 
[2025-06-04 18:43:26] 2025-06-04 22:43:10,815 | INFO     | architecture information:
[2025-06-04 18:43:26] 2025-06-04 22:43:10,816 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:43:26] 2025-06-04 22:43:10,929 | INFO     | cat /etc/os-release:
[2025-06-04 18:43:26] NAME="CentOS Linux"
[2025-06-04 18:43:26] VERSION="7 (Core)"
[2025-06-04 18:43:26] ID="centos"
[2025-06-04 18:43:26] ID_LIKE="rhel fedora"
[2025-06-04 18:43:26] VERSION_ID="7"
[2025-06-04 18:43:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:43:26] ANSI_COLOR="0;31"
[2025-06-04 18:43:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:43:26] HOME_URL="https://www.centos.org/"
[2025-06-04 18:43:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:43:26] 
[2025-06-04 18:43:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:43:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:43:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:43:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:43:26] 
[2025-06-04 18:43:26] 2025-06-04 22:43:10,929 | INFO     | **************************************
[2025-06-04 18:43:26] 2025-06-04 22:43:11,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 18:43:26] 2025-06-04 22:43:11,601 | INFO     | sufficient remaining disk space (56974376960 B)
[2025-06-04 18:43:26] 2025-06-04 22:43:11,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:43:26] 2025-06-04 22:43:11,602 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:43:26] 2025-06-04 22:43:11,602 | INFO     | update_server=False
[2025-06-04 18:43:26] 2025-06-04 22:43:11,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:43:26] 2025-06-04 22:43:11,605 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:43:26] 2025-06-04 22:43:11,606 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:43:26] 2025-06-04 22:43:11,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:43:26] 2025-06-04 22:43:11,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:43:26] 2025-06-04 22:43:11,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:43:26] 2025-06-04 22:43:12,064 | INFO     | all payload control threads have been joined
[2025-06-04 18:43:26] 2025-06-04 22:43:12,270 | INFO     | all data control threads have been joined
[2025-06-04 18:43:26] 2025-06-04 22:43:12,363 | INFO     | all job control threads have been joined
[2025-06-04 18:43:26] 2025-06-04 22:43:12,431 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:43:26] 2025-06-04 22:43:12,431 | INFO     | aborting loop
[2025-06-04 18:43:26] 2025-06-04 22:43:12,611 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:12,852 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:12,861 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,070 | INFO     | [payload] control thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:43:26] 2025-06-04 22:43:13,276 | INFO     | [data] control thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,353 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,369 | INFO     | [job] control thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,437 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,459 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,467 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,568 | INFO     | [job] validate thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,872 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:13,977 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:14,110 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:14,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:43:26] 2025-06-04 22:43:18,332 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:43:26] 2025-06-04 22:43:19,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005667125056)>', '<ExcThread(monitor, started 140005229967104)>']
[2025-06-04 18:43:26] 2025-06-04 22:43:19,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:43:26] 2025-06-04 22:43:19,652 | INFO     | [monitor] control thread has ended
[2025-06-04 18:43:26] 2025-06-04 22:43:24,281 | INFO     | all workflow threads have been joined
[2025-06-04 18:43:26] 2025-06-04 22:43:24,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:43:26] 2025-06-04 22:43:24,282 | INFO     | traces error code: 0
[2025-06-04 18:43:26] 2025-06-04 22:43:24,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:43:26] 2025-06-04 22:43:24,735 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:43:26] 2025-06-04 22:43:24,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:43:26] 2025-06-04 22:43:24,796 [wrapper] pilotpid: 40891
[2025-06-04 18:43:26] 2025-06-04 22:43:24,835 [wrapper] Pilot exit status: 0
[2025-06-04 18:43:26] 2025-06-04 22:43:24,924 [wrapper] pandaids: 6679930012
[2025-06-04 18:43:26] 2025-06-04 22:43:25,386 [wrapper] cleanup supervisor_pilot 36337 40892
[2025-06-04 18:43:26] 2025-06-04 22:43:25,419 [wrapper] Test setup, not cleaning
[2025-06-04 18:43:26] 2025-06-04 22:43:25,457 [wrapper] apfmon messages muted
[2025-06-04 18:43:26] 2025-06-04 22:43:25,494 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:43:26] 2025-06-04 22:43:25,527 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:43:26]  *** Error codes and diagnostics ***
[2025-06-04 18:43:26]     "exeErrorCode": 0,
[2025-06-04 18:43:26]     "exeErrorDiag": "",
[2025-06-04 18:43:26]     "pilotErrorCode": 0,
[2025-06-04 18:43:26]     "pilotErrorDiag": "",
[2025-06-04 18:43:26]  *** Listing of results directory ***
[2025-06-04 18:43:26] total 398884
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 13:44 pilot3.tar.gz
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 14:06 queuedata.json
[2025-06-04 18:43:26] -rwx------ 1 boincer umatlas     37140 Jun  4 14:08 runpilot2-wrapper.sh
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas       100 Jun  4 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:43:26] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 14:15 run_atlas
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas       105 Jun  4 14:15 job.xml
[2025-06-04 18:43:26] -rw-r--r-- 2 boincer umatlas 218765935 Jun  4 14:15 EVNT.45006593._000743.pool.root.1
[2025-06-04 18:43:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:15 start_atlas.sh
[2025-06-04 18:43:26] drwxrwx--x 2 boincer umatlas      4096 Jun  4 14:15 shared
[2025-06-04 18:43:26] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 14:15 input.tar.gz
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas         0 Jun  4 14:15 boinc_lockfile
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas      2523 Jun  4 14:16 pandaJob.out
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas    990984 Jun  4 14:17 agis_schedconf.cvmfs.json
[2025-06-04 18:43:26] drwx------ 4 boincer umatlas      4096 Jun  4 14:17 pilot3
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas 182353053 Jun  4 18:40 HITS.45006595._056861.pool.root.1
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas       531 Jun  4 18:40 boinc_task_state.xml
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas      6229 Jun  4 18:41 init_data.xml
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas      1063 Jun  4 18:41 memory_monitor_summary.json
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas   1598969 Jun  4 18:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas    443131 Jun  4 18:42 log.45006595._056861.job.log.tgz.1
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas        95 Jun  4 18:42 pilot_heartbeat.json
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas      7764 Jun  4 18:43 heartbeat.json
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas        28 Jun  4 18:43 wrapper_checkpoint.txt
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 18:43 boinc_mmap_file
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas      4476 Jun  4 18:43 pilotlog.txt
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas   1307039 Jun  4 18:43 log.45006595._056861.job.log.1
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas       357 Jun  4 18:43 output.list
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas       620 Jun  4 18:43 runtime_log
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas   1771520 Jun  4 18:43 result.tar.gz
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas      8662 Jun  4 18:43 runtime_log.err
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas       662 Jun  4 18:43 hoKLDm7h7g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw1nKDmlAN2Ym.diag
[2025-06-04 18:43:26] -rw-r--r-- 1 boincer umatlas     20971 Jun  4 18:43 stderr.txt
[2025-06-04 18:43:26] HITS file was successfully produced:
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas 182353053 Jun  4 18:40 shared/HITS.pool.root.1
[2025-06-04 18:43:26]  *** Contents of shared directory: ***
[2025-06-04 18:43:26] total 393972
[2025-06-04 18:43:26] -rw-r--r-- 2 boincer umatlas 218765935 Jun  4 14:15 ATLAS.root_0
[2025-06-04 18:43:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 14:15 start_atlas.sh
[2025-06-04 18:43:26] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 14:15 input.tar.gz
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas 182353053 Jun  4 18:40 HITS.pool.root.1
[2025-06-04 18:43:26] -rw------- 1 boincer umatlas   1771520 Jun  4 18:43 result.tar.gz
18:43:28 (29235): run_atlas exited; CPU time 46729.113465
18:43:28 (29235): called boinc_finish(0)

</stderr_txt>
]]>

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