Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:06:25 (2978445): wrapper (7.7.26015): starting
14:06:25 (2978445): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 14:06:25] Arguments: --nthreads 12
[2025-06-04 14:06:25] Threads: 12
[2025-06-04 14:06:25] Checking for CVMFS
[2025-06-04 14:06:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:06:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:06:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:06:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:06:25] 2.12.6.0 5181 1104 114168 146789 0 391 28257827 32935936 7663 16776704 0 5618625 99.678 3920118 29396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 14:06:25] CVMFS is ok
[2025-06-04 14:06:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:06:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:06:25] Further information can be found at the LHC@home message board.
[2025-06-04 14:06:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:06:25] Checking for apptainer binary...
[2025-06-04 14:06:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:06:25] Running /usr/bin/apptainer --version
[2025-06-04 14:06:25] apptainer version 1.4.1-1.el9
[2025-06-04 14:06:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:06:25] c6-1-24-3.aglt2.org
[2025-06-04 14:06:25] apptainer works
[2025-06-04 14:06:26] Set ATHENA_PROC_NUMBER=12
[2025-06-04 14:06:26] Set ATHENA_CORE_NUMBER=12
[2025-06-04 14:06:26] Starting ATLAS job with PandaID=6666850569
[2025-06-04 14:06:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:13:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:13:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 15:13:19]  is_altstaged=None
[2025-06-04 15:13:19]  is_tar=False
[2025-06-04 15:13:19]  lfn=log.44871837._064649.job.log.tgz.1
[2025-06-04 15:13:19]  mtime=0
[2025-06-04 15:13:19]  protocol_id=None
[2025-06-04 15:13:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 15:13:19]  replicas=None
[2025-06-04 15:13:19]  scope=mc23_13p6TeV
[2025-06-04 15:13:19]  status=None
[2025-06-04 15:13:19]  status_code=0
[2025-06-04 15:13:19]  storage_token=
[2025-06-04 15:13:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666850569/log.44871837._064649.job.log.tgz.1
[2025-06-04 15:13:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/c0/log.44871837._064649.job.log.tgz.1
[2025-06-04 15:13:19]  workdir=None
[2025-06-04 15:13:19] ]
[2025-06-04 15:13:19] 2025-06-04 19:12:54,488 | INFO     | transferring file log.44871837._064649.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666850569/log.44871837._064649.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 15:13:19] 2025-06-04 19:12:54,489 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666850569/log.44871837._064649.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._064649.job
[2025-06-04 15:13:19] 2025-06-04 19:12:54,509 | INFO     | adding to output.list: log.44871837._064649.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/c0/log.44871837._064649.job.log.tg
[2025-06-04 15:13:19] 2025-06-04 19:12:54,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 15:13:19] 2025-06-04 19:12:54,510 | INFO     | summary of transferred files:
[2025-06-04 15:13:19] 2025-06-04 19:12:54,510 | INFO     |  -- lfn=log.44871837._064649.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 15:13:19] 2025-06-04 19:12:54,511 | INFO     | stage-out finished correctly
[2025-06-04 15:13:19] 2025-06-04 19:12:54,596 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 15:13:19] 2025-06-04 19:12:54,941 | INFO     | PID=2982187 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 15:13:19] 2025-06-04 19:12:54,941 | INFO     | .. there are 8 such processes running
[2025-06-04 15:13:19] 2025-06-04 19:12:55,915 | INFO     | job 6666850569 has state=finished
[2025-06-04 15:13:19] 2025-06-04 19:12:55,915 | INFO     | preparing for final server update for job 6666850569 in state='finished'
[2025-06-04 15:13:19] 2025-06-04 19:12:55,916 | INFO     | this job has now completed (state=finished)
[2025-06-04 15:13:19] 2025-06-04 19:12:55,916 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 15:13:19] 2025-06-04 19:12:55,916 | INFO     | log transfer has been attempted: DONE
[2025-06-04 15:13:19] 2025-06-04 19:12:55,916 | INFO     | job 6666850569 has finished - writing final server update
[2025-06-04 15:13:19] 2025-06-04 19:12:55,917 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:13:19] 2025-06-04 19:12:55,932 | INFO     | executing command: lscpu
[2025-06-04 15:13:19] 2025-06-04 19:12:55,992 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:13:19] 2025-06-04 19:12:57,101 | WARNING  | process 2988692 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 15:13:19] 2025-06-04 19:12:57,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850569/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:13:19] 2025-06-04 19:12:57,312 | INFO     | number of running child processes to parent process 2988692: 1
[2025-06-04 15:13:19] 2025-06-04 19:12:57,312 | INFO     | maximum number of monitored processes: 6
[2025-06-04 15:13:19] 2025-06-04 19:12:59,648 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 15:13:19] 2025-06-04 19:12:59,649 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850569/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:13:19] 2025-06-04 19:12:59,649 | INFO     | extracted standard info from prmon json
[2025-06-04 15:13:19] 2025-06-04 19:12:59,649 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:13:19] 2025-06-04 19:12:59,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:13:19] 2025-06-04 19:12:59,650 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:13:19] 2025-06-04 19:12:59,650 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | sum of deviations: -941553574.5
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | mean x: 1749062464.5
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | mean y: 2435179.224137931
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | -- intersect: 27230518528.73082
[2025-06-04 15:13:19] 2025-06-04 19:12:59,652 | INFO     | intersect: 27230518528.73082
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | chi2: 0.055996197263669056
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | -- intersect: 27230518528.73082
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | current memory leak: -15.57 B/s (using 58 data points, chi2=0.06)
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | ..............................
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | . Timing measurements:
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | . get job = 0 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | . initial setup = 2 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | . payload setup = 6 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,653 | INFO     | . stage-in = 0 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,654 | INFO     | . payload execution = 3952 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,654 | INFO     | . stage-out = 0 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,654 | INFO     | . log creation = 0 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,654 | INFO     | ..............................
[2025-06-04 15:13:19] 2025-06-04 19:12:59,736 | INFO     | 
[2025-06-04 15:13:19] 2025-06-04 19:12:59,736 | INFO     | job summary report
[2025-06-04 15:13:19] 2025-06-04 19:12:59,736 | INFO     | --------------------------------------------------
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | PanDA job id: 6666850569
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | task id: 44871837
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | errors: (none)
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | pilot state: finished 
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | transexitcode: 0
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | exeerrorcode: 0
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | exeerrordiag: 
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | exitcode: 0
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | exitmsg: OK
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | cpuconsumptiontime: 43109 s
[2025-06-04 15:13:19] 2025-06-04 19:12:59,737 | INFO     | nevents: 400
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | neventsw: 0
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | pid: 2988692
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | pgrp: 2988692
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | corecount: 12
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | event service: False
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | sizes: {0: 2397220, 1: 2397419, 4: 2397625, 11: 2397653, 3962: 2423455, 3963: 2423454, 3964: 2432635, 3969: 2432749}
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | --------------------------------------------------
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | 
[2025-06-04 15:13:19] 2025-06-04 19:12:59,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 15:13:19] 2025-06-04 19:12:59,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:13:19] 2025-06-04 19:12:59,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:13:19] 2025-06-04 19:12:59,762 | INFO     | job 6666850569 has completed (purged errors)
[2025-06-04 15:13:19] 2025-06-04 19:12:59,762 | INFO     | overall cleanup function is called
[2025-06-04 15:13:19] 2025-06-04 19:13:00,770 | INFO     | --- collectZombieJob: --- 10, [2988692]
[2025-06-04 15:13:19] 2025-06-04 19:13:00,771 | INFO     | zombie collector waiting for pid 2988692
[2025-06-04 15:13:19] 2025-06-04 19:13:00,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:13:19] 2025-06-04 19:13:00,771 | INFO     | collected zombie processes
[2025-06-04 15:13:19] 2025-06-04 19:13:00,771 | INFO     | will attempt to kill all subprocesses of pid=2988692
[2025-06-04 15:13:19] 2025-06-04 19:13:00,992 | INFO     | process IDs to be killed: [2988692] (in reverse order)
[2025-06-04 15:13:19] 2025-06-04 19:13:01,063 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:13:19] 2025-06-04 19:13:01,064 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:13:19] 2025-06-04 19:13:01,072 | INFO     | did not find any defunct processes belonging to 2988692
[2025-06-04 15:13:19] 2025-06-04 19:13:01,081 | INFO     | did not find any defunct processes belonging to 2988692
[2025-06-04 15:13:19] 2025-06-04 19:13:01,081 | INFO     | ready for new job
[2025-06-04 15:13:19] 2025-06-04 19:13:01,081 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:13:19] 2025-06-04 19:13:01,083 | INFO     | **************************************
[2025-06-04 15:13:19] 2025-06-04 19:13:01,083 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:13:19] 2025-06-04 19:13:01,083 | INFO     | **************************************
[2025-06-04 15:13:19] 2025-06-04 19:13:01,083 | INFO     | 
[2025-06-04 15:13:19] 2025-06-04 19:13:01,098 | INFO     | architecture information:
[2025-06-04 15:13:19] 2025-06-04 19:13:01,099 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:13:19] 2025-06-04 19:13:01,114 | INFO     | cat /etc/os-release:
[2025-06-04 15:13:19] NAME="CentOS Linux"
[2025-06-04 15:13:19] VERSION="7 (Core)"
[2025-06-04 15:13:19] ID="centos"
[2025-06-04 15:13:19] ID_LIKE="rhel fedora"
[2025-06-04 15:13:19] VERSION_ID="7"
[2025-06-04 15:13:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:13:19] ANSI_COLOR="0;31"
[2025-06-04 15:13:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:13:19] HOME_URL="https://www.centos.org/"
[2025-06-04 15:13:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:13:19] 
[2025-06-04 15:13:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:13:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:13:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:13:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:13:19] 
[2025-06-04 15:13:19] 2025-06-04 19:13:01,114 | INFO     | **************************************
[2025-06-04 15:13:19] 2025-06-04 19:13:01,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 15:13:19] 2025-06-04 19:13:01,634 | INFO     | sufficient remaining disk space (76558630912 B)
[2025-06-04 15:13:19] 2025-06-04 19:13:01,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:13:19] 2025-06-04 19:13:01,635 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:13:19] 2025-06-04 19:13:01,635 | INFO     | update_server=False
[2025-06-04 15:13:19] 2025-06-04 19:13:01,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:13:19] 2025-06-04 19:13:01,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:13:19] 2025-06-04 19:13:01,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:13:19] 2025-06-04 19:13:01,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:13:19] 2025-06-04 19:13:01,636 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:13:19] 2025-06-04 19:13:01,636 | INFO     | aborting loop
[2025-06-04 15:13:19] 2025-06-04 19:13:01,637 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:13:19] 2025-06-04 19:13:01,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:13:19] 2025-06-04 19:13:01,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:13:19] 2025-06-04 19:13:02,341 | INFO     | all data control threads have been joined
[2025-06-04 15:13:19] 2025-06-04 19:13:02,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:13:19] 2025-06-04 19:13:02,640 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:02,641 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:02,641 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:02,774 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:02,961 | INFO     | all job control threads have been joined
[2025-06-04 15:13:19] 2025-06-04 19:13:02,963 | INFO     | all payload control threads have been joined
[2025-06-04 15:13:19] 2025-06-04 19:13:03,249 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,317 | INFO     | [job] validate thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,346 | INFO     | [data] control thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,357 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,515 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,642 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,963 | INFO     | [job] control thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:03,968 | INFO     | [payload] control thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:04,120 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:04,611 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:05,641 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:12,442 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:13:19] 2025-06-04 19:13:13,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:13:19] 2025-06-04 19:13:13,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898080741184)>', '<ExcThread(monitor, started 139897604134656)>']
[2025-06-04 15:13:19] 2025-06-04 19:13:14,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:13:19] 2025-06-04 19:13:14,698 | INFO     | [monitor] control thread has ended
[2025-06-04 15:13:19] 2025-06-04 19:13:18,994 | INFO     | all workflow threads have been joined
[2025-06-04 15:13:19] 2025-06-04 19:13:18,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:13:19] 2025-06-04 19:13:18,995 | INFO     | traces error code: 0
[2025-06-04 15:13:19] 2025-06-04 19:13:18,995 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:13:19] 2025-06-04 19:13:19,157 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:13:19] 2025-06-04 19:13:19,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:13:19] 2025-06-04 19:13:19,164 [wrapper] pilotpid: 2982187
[2025-06-04 15:13:19] 2025-06-04 19:13:19,166 [wrapper] Pilot exit status: 0
[2025-06-04 15:13:19] 2025-06-04 19:13:19,177 [wrapper] pandaids: 6666850569
[2025-06-04 15:13:19] 2025-06-04 19:13:19,235 [wrapper] cleanup supervisor_pilot 3108950 2982188
[2025-06-04 15:13:19] 2025-06-04 19:13:19,238 [wrapper] Test setup, not cleaning
[2025-06-04 15:13:19] 2025-06-04 19:13:19,241 [wrapper] apfmon messages muted
[2025-06-04 15:13:19] 2025-06-04 19:13:19,242 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:13:19] 2025-06-04 19:13:19,244 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:13:19]  *** Error codes and diagnostics ***
[2025-06-04 15:13:19]     "exeErrorCode": 0,
[2025-06-04 15:13:19]     "exeErrorDiag": "",
[2025-06-04 15:13:19]     "pilotErrorCode": 0,
[2025-06-04 15:13:19]     "pilotErrorDiag": "",
[2025-06-04 15:13:19]  *** Listing of results directory ***
[2025-06-04 15:13:19] total 419912
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas      5111 May 27 04:34 queuedata.json
[2025-06-04 15:13:19] -rwx------. 1 boincer umatlas     37140 May 27 04:35 runpilot2-wrapper.sh
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas       100 Jun  4 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:13:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 14:06 run_atlas
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas       105 Jun  4 14:06 job.xml
[2025-06-04 15:13:19] -rw-r--r--. 2 boincer umatlas 225912571 Jun  4 14:06 EVNT.44871834._002548.pool.root.1
[2025-06-04 15:13:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 14:06 start_atlas.sh
[2025-06-04 15:13:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 14:06 shared
[2025-06-04 15:13:19] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 14:06 input.tar.gz
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas         0 Jun  4 14:06 boinc_lockfile
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 14:06 pandaJob.out
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas    990984 Jun  4 14:06 agis_schedconf.cvmfs.json
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas   1598969 Jun  4 14:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:13:19] drwx------. 4 boincer umatlas      4096 Jun  4 14:06 pilot3
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas       529 Jun  4 15:12 boinc_task_state.xml
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas 198743804 Jun  4 15:12 HITS.44871837._064649.pool.root.1
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas        95 Jun  4 15:12 pilot_heartbeat.json
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas      1033 Jun  4 15:12 memory_monitor_summary.json
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas    347793 Jun  4 15:12 log.44871837._064649.job.log.tgz.1
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas      7716 Jun  4 15:12 heartbeat.json
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 15:13 init_data.xml
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 15:13 boinc_mmap_file
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas        27 Jun  4 15:13 wrapper_checkpoint.txt
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas      4548 Jun  4 15:13 pilotlog.txt
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas    405185 Jun  4 15:13 log.44871837._064649.job.log.1
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas       357 Jun  4 15:13 output.list
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas       620 Jun  4 15:13 runtime_log
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas    768000 Jun  4 15:13 result.tar.gz
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 15:13 runtime_log.err
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas       654 Jun  4 15:13 qGvLDmFx4d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2wYKDmMGeR5m.diag
[2025-06-04 15:13:19] -rw-r--r--. 1 boincer umatlas     21440 Jun  4 15:13 stderr.txt
[2025-06-04 15:13:19] HITS file was successfully produced:
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas 198743804 Jun  4 15:12 shared/HITS.pool.root.1
[2025-06-04 15:13:19]  *** Contents of shared directory: ***
[2025-06-04 15:13:19] total 415980
[2025-06-04 15:13:19] -rw-r--r--. 2 boincer umatlas 225912571 Jun  4 14:06 ATLAS.root_0
[2025-06-04 15:13:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 14:06 start_atlas.sh
[2025-06-04 15:13:19] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 14:06 input.tar.gz
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas 198743804 Jun  4 15:12 HITS.pool.root.1
[2025-06-04 15:13:19] -rw-------. 1 boincer umatlas    768000 Jun  4 15:13 result.tar.gz
15:13:20 (2978445): run_atlas exited; CPU time 43162.938342
15:13:20 (2978445): called boinc_finish(0)

</stderr_txt>
]]>

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