Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:26 (3158883): wrapper (7.7.26015): starting
13:40:26 (3158883): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:40:26] Arguments: --nthreads 8
[2025-06-04 13:40:26] Threads: 8
[2025-06-04 13:40:26] Checking for CVMFS
[2025-06-04 13:40:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:40:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:40:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:40:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:40:26] 2.12.6.0 4471 37626 537204 146789 1 287 22122902 32935937 14386 16776704 0 157314124 99.571 183639245 27634 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 13:40:26] CVMFS is ok
[2025-06-04 13:40:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:40:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:40:26] Further information can be found at the LHC@home message board.
[2025-06-04 13:40:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:40:26] Checking for apptainer binary...
[2025-06-04 13:40:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:40:26] Running /usr/bin/apptainer --version
[2025-06-04 13:40:26] apptainer version 1.4.1-1.el9
[2025-06-04 13:40:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:40:26] c7-11-13.aglt2.org
[2025-06-04 13:40:26] apptainer works
[2025-06-04 13:40:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:40:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:40:26] Starting ATLAS job with PandaID=6679914516
[2025-06-04 13:40:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:35:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:35:08]  is_tar=False
[2025-06-04 14:35:08]  lfn=log.45006595._056853.job.log.tgz.1
[2025-06-04 14:35:08]  mtime=0
[2025-06-04 14:35:08]  protocol_id=None
[2025-06-04 14:35:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:35:08]  replicas=None
[2025-06-04 14:35:08]  scope=mc23_13p6TeV
[2025-06-04 14:35:08]  status=None
[2025-06-04 14:35:08]  status_code=0
[2025-06-04 14:35:08]  storage_token=
[2025-06-04 14:35:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679914516/log.45006595._056853.job.log.tgz.1
[2025-06-04 14:35:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/88/log.45006595._056853.job.log.tgz.1
[2025-06-04 14:35:08]  workdir=None
[2025-06-04 14:35:08] ]
[2025-06-04 14:35:08] 2025-06-04 18:34:41,069 | INFO     | transferring file log.45006595._056853.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679914516/log.45006595._056853.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:35:08] 2025-06-04 18:34:41,070 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679914516/log.45006595._056853.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056853.job
[2025-06-04 14:35:08] 2025-06-04 18:34:41,091 | INFO     | adding to output.list: log.45006595._056853.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/88/log.45006595._056853.job.log.tg
[2025-06-04 14:35:08] 2025-06-04 18:34:41,092 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:35:08] 2025-06-04 18:34:41,092 | INFO     | summary of transferred files:
[2025-06-04 14:35:08] 2025-06-04 18:34:41,092 | INFO     |  -- lfn=log.45006595._056853.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:35:08] 2025-06-04 18:34:41,092 | INFO     | stage-out finished correctly
[2025-06-04 14:35:08] 2025-06-04 18:34:42,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:35:08] 2025-06-04 18:34:43,209 | WARNING  | process 3169403 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:35:08] 2025-06-04 18:34:43,209 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679914516/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:35:08] 2025-06-04 18:34:43,510 | INFO     | number of running child processes to parent process 3169403: 1
[2025-06-04 14:35:08] 2025-06-04 18:34:43,511 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:35:08] 2025-06-04 18:34:45,034 | INFO     | job 6679914516 has state=finished
[2025-06-04 14:35:08] 2025-06-04 18:34:45,034 | INFO     | preparing for final server update for job 6679914516 in state='finished'
[2025-06-04 14:35:08] 2025-06-04 18:34:45,035 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:35:08] 2025-06-04 18:34:45,035 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:35:08] 2025-06-04 18:34:45,036 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:35:08] 2025-06-04 18:34:45,036 | INFO     | job 6679914516 has finished - writing final server update
[2025-06-04 14:35:08] 2025-06-04 18:34:45,036 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:35:08] 2025-06-04 18:34:45,053 | INFO     | executing command: lscpu
[2025-06-04 14:35:08] 2025-06-04 18:34:45,134 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:35:08] 2025-06-04 18:34:46,014 | INFO     | monitor loop #243: job 0:6679914516 is in state 'finished'
[2025-06-04 14:35:08] 2025-06-04 18:34:46,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:35:08] 2025-06-04 18:34:48,517 | INFO     | monitor loop #244: job 0:6679914516 is in state 'finished'
[2025-06-04 14:35:08] 2025-06-04 18:34:48,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:35:08] 2025-06-04 18:34:49,023 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:35:08] 2025-06-04 18:34:49,023 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679914516/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:35:08] 2025-06-04 18:34:49,024 | INFO     | extracted standard info from prmon json
[2025-06-04 14:35:08] 2025-06-04 18:34:49,024 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:35:08] 2025-06-04 18:34:49,024 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:35:08] 2025-06-04 18:34:49,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:35:08] 2025-06-04 18:34:49,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:35:08] 2025-06-04 18:34:49,026 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:35:08] 2025-06-04 18:34:49,026 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 14:35:08] 2025-06-04 18:34:49,026 | INFO     | sum of deviations: -6075690463.0
[2025-06-04 14:35:08] 2025-06-04 18:34:49,026 | INFO     | mean x: 1749060543.5
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | mean y: 2388709.0434782607
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | -- intersect: 352254703130.2908
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | intersect: 352254703130.2908
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | chi2: 0.11643864234625405
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | -- intersect: 352254703130.2908
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | current memory leak: -201.40 B/s (using 46 data points, chi2=0.12)
[2025-06-04 14:35:08] 2025-06-04 18:34:49,027 | INFO     | ..............................
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . Timing measurements:
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . get job = 0 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . initial setup = 2 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . payload setup = 7 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . stage-in = 0 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . payload execution = 3215 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . stage-out = 0 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | . log creation = 0 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,028 | INFO     | ..............................
[2025-06-04 14:35:08] 2025-06-04 18:34:49,116 | INFO     | 
[2025-06-04 14:35:08] 2025-06-04 18:34:49,116 | INFO     | job summary report
[2025-06-04 14:35:08] 2025-06-04 18:34:49,116 | INFO     | --------------------------------------------------
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | PanDA job id: 6679914516
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | task id: 45006595
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | errors: (none)
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | pilot state: finished 
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | transexitcode: 0
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | exeerrorcode: 0
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | exeerrordiag: 
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | exitcode: 0
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | exitmsg: OK
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | cpuconsumptiontime: 23815 s
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | nevents: 400
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | neventsw: 0
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | pid: 3169403
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | pgrp: 3169403
[2025-06-04 14:35:08] 2025-06-04 18:34:49,117 | INFO     | corecount: 8
[2025-06-04 14:35:08] 2025-06-04 18:34:49,118 | INFO     | event service: False
[2025-06-04 14:35:08] 2025-06-04 18:34:49,118 | INFO     | sizes: {0: 2397127, 1: 2397269, 5: 2397475, 11: 2397531, 3226: 2422853, 3227: 2431794, 3229: 2431978, 3235: 2432148}
[2025-06-04 14:35:08] 2025-06-04 18:34:49,118 | INFO     | --------------------------------------------------
[2025-06-04 14:35:08] 2025-06-04 18:34:49,118 | INFO     | 
[2025-06-04 14:35:08] 2025-06-04 18:34:49,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:35:08] 2025-06-04 18:34:49,141 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | job 6679914516 has completed (purged errors)
[2025-06-04 14:35:08] 2025-06-04 18:34:49,143 | INFO     | overall cleanup function is called
[2025-06-04 14:35:08] 2025-06-04 18:34:50,152 | INFO     | --- collectZombieJob: --- 10, [3169403]
[2025-06-04 14:35:08] 2025-06-04 18:34:50,152 | INFO     | zombie collector waiting for pid 3169403
[2025-06-04 14:35:08] 2025-06-04 18:34:50,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:35:08] 2025-06-04 18:34:50,152 | INFO     | collected zombie processes
[2025-06-04 14:35:08] 2025-06-04 18:34:50,152 | INFO     | will attempt to kill all subprocesses of pid=3169403
[2025-06-04 14:35:08] 2025-06-04 18:34:50,453 | INFO     | process IDs to be killed: [3169403] (in reverse order)
[2025-06-04 14:35:08] 2025-06-04 18:34:50,557 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:35:08] 2025-06-04 18:34:50,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:35:08] 2025-06-04 18:34:50,571 | INFO     | did not find any defunct processes belonging to 3169403
[2025-06-04 14:35:08] 2025-06-04 18:34:50,582 | INFO     | did not find any defunct processes belonging to 3169403
[2025-06-04 14:35:08] 2025-06-04 18:34:50,582 | INFO     | ready for new job
[2025-06-04 14:35:08] 2025-06-04 18:34:50,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:35:08] 2025-06-04 18:34:50,584 | INFO     | **************************************
[2025-06-04 14:35:08] 2025-06-04 18:34:50,584 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:35:08] 2025-06-04 18:34:50,584 | INFO     | **************************************
[2025-06-04 14:35:08] 2025-06-04 18:34:50,584 | INFO     | 
[2025-06-04 14:35:08] 2025-06-04 18:34:50,599 | INFO     | architecture information:
[2025-06-04 14:35:08] 2025-06-04 18:34:50,599 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:35:08] 2025-06-04 18:34:50,612 | INFO     | cat /etc/os-release:
[2025-06-04 14:35:08] NAME="CentOS Linux"
[2025-06-04 14:35:08] VERSION="7 (Core)"
[2025-06-04 14:35:08] ID="centos"
[2025-06-04 14:35:08] ID_LIKE="rhel fedora"
[2025-06-04 14:35:08] VERSION_ID="7"
[2025-06-04 14:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:35:08] ANSI_COLOR="0;31"
[2025-06-04 14:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:35:08] HOME_URL="https://www.centos.org/"
[2025-06-04 14:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:35:08] 
[2025-06-04 14:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:35:08] 
[2025-06-04 14:35:08] 2025-06-04 18:34:50,613 | INFO     | **************************************
[2025-06-04 14:35:08] 2025-06-04 18:34:51,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:35:08] 2025-06-04 18:34:51,135 | INFO     | sufficient remaining disk space (96707018752 B)
[2025-06-04 14:35:08] 2025-06-04 18:34:51,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:35:08] 2025-06-04 18:34:51,135 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:35:08] 2025-06-04 18:34:51,135 | INFO     | update_server=False
[2025-06-04 14:35:08] 2025-06-04 18:34:51,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:35:08] 2025-06-04 18:34:51,136 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:35:08] 2025-06-04 18:34:51,137 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:35:08] 2025-06-04 18:34:51,137 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:35:08] 2025-06-04 18:34:51,137 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:35:08] 2025-06-04 18:34:51,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:35:08] 2025-06-04 18:34:51,989 | INFO     | all job control threads have been joined
[2025-06-04 14:35:08] 2025-06-04 18:34:52,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:35:08] 2025-06-04 18:34:52,026 | INFO     | aborting loop
[2025-06-04 14:35:08] 2025-06-04 18:34:52,141 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:52,152 | INFO     | all data control threads have been joined
[2025-06-04 14:35:08] 2025-06-04 18:34:52,500 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:52,561 | INFO     | all payload control threads have been joined
[2025-06-04 14:35:08] 2025-06-04 18:34:52,766 | INFO     | [job] validate thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:52,771 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:52,931 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:52,994 | INFO     | [job] control thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,031 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,086 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,158 | INFO     | [data] control thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,302 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,510 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:35:08] 2025-06-04 18:34:53,566 | INFO     | [payload] control thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:53,688 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:54,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:35:08] 2025-06-04 18:34:55,133 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:34:57,516 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:35:01,447 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:35:08] 2025-06-04 18:35:02,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:35:08] 2025-06-04 18:35:03,456 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422186841920)>', '<ExcThread(monitor, started 140421246207744)>']
[2025-06-04 14:35:08] 2025-06-04 18:35:04,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:35:08] 2025-06-04 18:35:04,192 | INFO     | [monitor] control thread has ended
[2025-06-04 14:35:08] 2025-06-04 18:35:08,460 | INFO     | all workflow threads have been joined
[2025-06-04 14:35:08] 2025-06-04 18:35:08,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:35:08] 2025-06-04 18:35:08,461 | INFO     | traces error code: 0
[2025-06-04 14:35:08] 2025-06-04 18:35:08,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:35:08] 2025-06-04 18:35:08,583 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:35:08] 2025-06-04 18:35:08,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:35:08] 2025-06-04 18:35:08,589 [wrapper] pilotpid: 3162474
[2025-06-04 14:35:08] 2025-06-04 18:35:08,592 [wrapper] Pilot exit status: 0
[2025-06-04 14:35:08] 2025-06-04 18:35:08,604 [wrapper] pandaids: 6679914516
[2025-06-04 14:35:08] 2025-06-04 18:35:08,691 [wrapper] cleanup supervisor_pilot 3263640 3162475
[2025-06-04 14:35:08] 2025-06-04 18:35:08,695 [wrapper] Test setup, not cleaning
[2025-06-04 14:35:08] 2025-06-04 18:35:08,698 [wrapper] apfmon messages muted
[2025-06-04 14:35:08] 2025-06-04 18:35:08,701 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:35:08] 2025-06-04 18:35:08,705 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:35:08]  *** Error codes and diagnostics ***
[2025-06-04 14:35:08]     "exeErrorCode": 0,
[2025-06-04 14:35:08]     "exeErrorDiag": "",
[2025-06-04 14:35:08]     "pilotErrorCode": 0,
[2025-06-04 14:35:08]     "pilotErrorDiag": "",
[2025-06-04 14:35:08]  *** Listing of results directory ***
[2025-06-04 14:35:08] total 388016
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 12:57 pilot3.tar.gz
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 13:38 queuedata.json
[2025-06-04 14:35:08] -rwx------. 1 boincer umatlas     37140 Jun  4 13:39 runpilot2-wrapper.sh
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas       100 Jun  4 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:35:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 13:40 run_atlas
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas       105 Jun  4 13:40 job.xml
[2025-06-04 14:35:08] -rw-r--r--. 2 boincer umatlas 215482225 Jun  4 13:40 EVNT.45006593._001728.pool.root.1
[2025-06-04 14:35:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:40 start_atlas.sh
[2025-06-04 14:35:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 13:40 shared
[2025-06-04 14:35:08] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 13:40 input.tar.gz
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas         0 Jun  4 13:40 boinc_lockfile
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 13:40 pandaJob.out
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas    990984 Jun  4 13:40 agis_schedconf.cvmfs.json
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:35:08] drwx------. 4 boincer umatlas      4096 Jun  4 13:40 pilot3
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 14:30 init_data.xml
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas 176743239 Jun  4 14:34 HITS.45006595._056853.pool.root.1
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas       529 Jun  4 14:34 boinc_task_state.xml
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas      1017 Jun  4 14:34 memory_monitor_summary.json
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas        95 Jun  4 14:34 pilot_heartbeat.json
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas    302458 Jun  4 14:34 log.45006595._056853.job.log.tgz.1
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas      7684 Jun  4 14:34 heartbeat.json
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:34 boinc_mmap_file
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas        27 Jun  4 14:34 wrapper_checkpoint.txt
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas      4548 Jun  4 14:35 pilotlog.txt
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas    333733 Jun  4 14:35 log.45006595._056853.job.log.1
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas       357 Jun  4 14:35 output.list
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:35 runtime_log
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas    655360 Jun  4 14:35 result.tar.gz
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 14:35 runtime_log.err
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas       652 Jun  4 14:35 fKnMDmuG7g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq1nKDmRk2G4n.diag
[2025-06-04 14:35:08] -rw-r--r--. 1 boincer umatlas     21518 Jun  4 14:35 stderr.txt
[2025-06-04 14:35:08] HITS file was successfully produced:
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas 176743239 Jun  4 14:34 shared/HITS.pool.root.1
[2025-06-04 14:35:08]  *** Contents of shared directory: ***
[2025-06-04 14:35:08] total 384196
[2025-06-04 14:35:08] -rw-r--r--. 2 boincer umatlas 215482225 Jun  4 13:40 ATLAS.root_0
[2025-06-04 14:35:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:40 start_atlas.sh
[2025-06-04 14:35:08] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 13:40 input.tar.gz
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas 176743239 Jun  4 14:34 HITS.pool.root.1
[2025-06-04 14:35:08] -rw-------. 1 boincer umatlas    655360 Jun  4 14:35 result.tar.gz
14:35:09 (3158883): run_atlas exited; CPU time 23827.677415
14:35:09 (3158883): called boinc_finish(0)

</stderr_txt>
]]>

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