Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:34:12 (1411353): wrapper (7.7.26015): starting
13:34:12 (1411353): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:34:12] Arguments: --nthreads 8
[2025-06-04 13:34:12] Threads: 8
[2025-06-04 13:34:12] Checking for CVMFS
[2025-06-04 13:34:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:34:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:34:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:34:12] 2.12.6.0 383503 23815 626648 146789 2 486 27001422 32935936 15712 16776704 0 228155233 99.691 182026290 22503 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 13:34:12] CVMFS is ok
[2025-06-04 13:34:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:34:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:34:12] Further information can be found at the LHC@home message board.
[2025-06-04 13:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:34:12] Checking for apptainer binary...
[2025-06-04 13:34:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:34:12] Running /usr/bin/apptainer --version
[2025-06-04 13:34:13] apptainer version 1.4.1-1.el9
[2025-06-04 13:34:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:34:13] c7-2-14.aglt2.org
[2025-06-04 13:34:13] apptainer works
[2025-06-04 13:34:13] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:34:13] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:34:13] Starting ATLAS job with PandaID=6668313494
[2025-06-04 13:34:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:12:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:12:06]  scope=mc23_13p6TeV
[2025-06-04 15:12:06]  status=None
[2025-06-04 15:12:06]  status_code=0
[2025-06-04 15:12:06]  storage_token=
[2025-06-04 15:12:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668313494/log.44871837._082316.job.log.tgz.1
[2025-06-04 15:12:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/3f/log.44871837._082316.job.log.tgz.1
[2025-06-04 15:12:06]  workdir=None
[2025-06-04 15:12:06] ]
[2025-06-04 15:12:06] 2025-06-04 19:11:30,515 | INFO     | transferring file log.44871837._082316.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668313494/log.44871837._082316.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 15:12:06] 2025-06-04 19:11:30,515 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668313494/log.44871837._082316.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._082316.job
[2025-06-04 15:12:06] 2025-06-04 19:11:30,572 | INFO     | adding to output.list: log.44871837._082316.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/3f/log.44871837._082316.job.log.tg
[2025-06-04 15:12:06] 2025-06-04 19:11:30,573 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 15:12:06] 2025-06-04 19:11:30,573 | INFO     | summary of transferred files:
[2025-06-04 15:12:06] 2025-06-04 19:11:30,573 | INFO     |  -- lfn=log.44871837._082316.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 15:12:06] 2025-06-04 19:11:30,573 | INFO     | stage-out finished correctly
[2025-06-04 15:12:06] 2025-06-04 19:11:31,186 | INFO     | monitor loop #413: job 0:6668313494 is in state 'finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:31,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:12:06] 2025-06-04 19:11:31,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 15:12:06] 2025-06-04 19:11:32,785 | INFO     | PID=1416456 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 15:12:06] 2025-06-04 19:11:32,785 | INFO     | .. there are 26 such processes running
[2025-06-04 15:12:06] 2025-06-04 19:11:33,671 | INFO     | job 6668313494 has state=finished
[2025-06-04 15:12:06] 2025-06-04 19:11:33,671 | INFO     | preparing for final server update for job 6668313494 in state='finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:33,672 | INFO     | this job has now completed (state=finished)
[2025-06-04 15:12:06] 2025-06-04 19:11:33,672 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 15:12:06] 2025-06-04 19:11:33,672 | INFO     | log transfer has been attempted: DONE
[2025-06-04 15:12:06] 2025-06-04 19:11:33,672 | INFO     | job 6668313494 has finished - writing final server update
[2025-06-04 15:12:06] 2025-06-04 19:11:33,672 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:12:06] 2025-06-04 19:11:33,711 | INFO     | monitor loop #414: job 0:6668313494 is in state 'finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:33,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:12:06] 2025-06-04 19:11:33,731 | INFO     | executing command: lscpu
[2025-06-04 15:12:06] 2025-06-04 19:11:33,840 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:12:06] 2025-06-04 19:11:36,239 | INFO     | monitor loop #415: job 0:6668313494 is in state 'finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:36,239 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:12:06] 2025-06-04 19:11:38,744 | INFO     | monitor loop #416: job 0:6668313494 is in state 'finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:38,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:12:06] 2025-06-04 19:11:41,263 | INFO     | monitor loop #417: job 0:6668313494 is in state 'finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:41,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:12:06] 2025-06-04 19:11:43,775 | INFO     | monitor loop #418: job 0:6668313494 is in state 'finished'
[2025-06-04 15:12:06] 2025-06-04 19:11:43,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:12:06] 2025-06-04 19:11:44,500 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:12:06] 2025-06-04 19:11:44,501 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668313494/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:12:06] 2025-06-04 19:11:44,502 | INFO     | extracted standard info from prmon json
[2025-06-04 15:12:06] 2025-06-04 19:11:44,502 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:12:06] 2025-06-04 19:11:44,502 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:12:06] 2025-06-04 19:11:44,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:12:06] 2025-06-04 19:11:44,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:12:06] 2025-06-04 19:11:44,504 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:12:06] 2025-06-04 19:11:44,505 | INFO     | sum of square deviations: 218571540.0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,505 | INFO     | sum of deviations: -19728157375.999996
[2025-06-04 15:12:06] 2025-06-04 19:11:44,505 | INFO     | mean x: 1749061477.0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,505 | INFO     | mean y: 2333927.584269663
[2025-06-04 15:12:06] 2025-06-04 19:11:44,505 | INFO     | -- intersect: 157871744000.6203
[2025-06-04 15:12:06] 2025-06-04 19:11:44,505 | INFO     | intersect: 157871744000.6203
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | chi2: 0.24861620166141185
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | -- intersect: 157871744000.6203
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | current memory leak: -90.26 B/s (using 89 data points, chi2=0.25)
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | ..............................
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | . Timing measurements:
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | . get job = 0 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,506 | INFO     | . initial setup = 2 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,507 | INFO     | . payload setup = 6 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,507 | INFO     | . stage-in = 0 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,507 | INFO     | . payload execution = 5800 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,507 | INFO     | . stage-out = 1 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,507 | INFO     | . log creation = 0 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,507 | INFO     | ..............................
[2025-06-04 15:12:06] 2025-06-04 19:11:44,911 | INFO     | 
[2025-06-04 15:12:06] 2025-06-04 19:11:44,911 | INFO     | job summary report
[2025-06-04 15:12:06] 2025-06-04 19:11:44,911 | INFO     | --------------------------------------------------
[2025-06-04 15:12:06] 2025-06-04 19:11:44,911 | INFO     | PanDA job id: 6668313494
[2025-06-04 15:12:06] 2025-06-04 19:11:44,911 | INFO     | task id: 44871837
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | errors: (none)
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | pilot state: finished 
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | transexitcode: 0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | exeerrorcode: 0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | exeerrordiag: 
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | exitcode: 0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | exitmsg: OK
[2025-06-04 15:12:06] 2025-06-04 19:11:44,912 | INFO     | cpuconsumptiontime: 41274 s
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | nevents: 400
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | neventsw: 0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | pid: 1427046
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | pgrp: 1427046
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | corecount: 8
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | event service: False
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5810: 2424244, 5813: 2433185, 5814: 2433241, 5827: 2433539}
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | --------------------------------------------------
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | 
[2025-06-04 15:12:06] 2025-06-04 19:11:44,913 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 15:12:06] 2025-06-04 19:11:44,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:12:06] 2025-06-04 19:11:44,953 | INFO     | job 6668313494 has completed (purged errors)
[2025-06-04 15:12:06] 2025-06-04 19:11:44,954 | INFO     | overall cleanup function is called
[2025-06-04 15:12:06] 2025-06-04 19:11:45,962 | INFO     | --- collectZombieJob: --- 10, [1427046]
[2025-06-04 15:12:06] 2025-06-04 19:11:45,962 | INFO     | zombie collector waiting for pid 1427046
[2025-06-04 15:12:06] 2025-06-04 19:11:45,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:12:06] 2025-06-04 19:11:45,962 | INFO     | collected zombie processes
[2025-06-04 15:12:06] 2025-06-04 19:11:45,963 | INFO     | will attempt to kill all subprocesses of pid=1427046
[2025-06-04 15:12:06] 2025-06-04 19:11:46,647 | INFO     | process IDs to be killed: [1427046] (in reverse order)
[2025-06-04 15:12:06] 2025-06-04 19:11:46,805 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:12:06] 2025-06-04 19:11:46,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:12:06] 2025-06-04 19:11:46,823 | INFO     | did not find any defunct processes belonging to 1427046
[2025-06-04 15:12:06] 2025-06-04 19:11:46,842 | INFO     | did not find any defunct processes belonging to 1427046
[2025-06-04 15:12:06] 2025-06-04 19:11:46,845 | INFO     | ready for new job
[2025-06-04 15:12:06] 2025-06-04 19:11:46,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:12:06] 2025-06-04 19:11:46,857 | INFO     | **************************************
[2025-06-04 15:12:06] 2025-06-04 19:11:46,858 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:12:06] 2025-06-04 19:11:46,858 | INFO     | **************************************
[2025-06-04 15:12:06] 2025-06-04 19:11:46,858 | INFO     | 
[2025-06-04 15:12:06] 2025-06-04 19:11:46,878 | INFO     | architecture information:
[2025-06-04 15:12:06] 2025-06-04 19:11:46,878 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:12:06] 2025-06-04 19:11:46,904 | INFO     | cat /etc/os-release:
[2025-06-04 15:12:06] NAME="CentOS Linux"
[2025-06-04 15:12:06] VERSION="7 (Core)"
[2025-06-04 15:12:06] ID="centos"
[2025-06-04 15:12:06] ID_LIKE="rhel fedora"
[2025-06-04 15:12:06] VERSION_ID="7"
[2025-06-04 15:12:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:12:06] ANSI_COLOR="0;31"
[2025-06-04 15:12:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:12:06] HOME_URL="https://www.centos.org/"
[2025-06-04 15:12:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:12:06] 
[2025-06-04 15:12:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:12:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:12:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:12:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:12:06] 
[2025-06-04 15:12:06] 2025-06-04 19:11:46,904 | INFO     | **************************************
[2025-06-04 15:12:06] 2025-06-04 19:11:47,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 15:12:06] 2025-06-04 19:11:47,451 | INFO     | sufficient remaining disk space (76062654464 B)
[2025-06-04 15:12:06] 2025-06-04 19:11:47,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:12:06] 2025-06-04 19:11:47,451 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:12:06] 2025-06-04 19:11:47,451 | INFO     | update_server=False
[2025-06-04 15:12:06] 2025-06-04 19:11:47,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:12:06] 2025-06-04 19:11:47,453 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:12:06] 2025-06-04 19:11:47,453 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:12:06] 2025-06-04 19:11:47,454 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:12:06] 2025-06-04 19:11:47,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:12:06] 2025-06-04 19:11:47,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:12:06] 2025-06-04 19:11:47,454 | INFO     | aborting loop
[2025-06-04 15:12:06] 2025-06-04 19:11:47,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:12:06] 2025-06-04 19:11:48,154 | INFO     | all data control threads have been joined
[2025-06-04 15:12:06] 2025-06-04 19:11:48,205 | INFO     | all payload control threads have been joined
[2025-06-04 15:12:06] 2025-06-04 19:11:48,347 | INFO     | all job control threads have been joined
[2025-06-04 15:12:06] 2025-06-04 19:11:48,459 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:48,459 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:48,460 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:48,566 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:48,720 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:12:06] 2025-06-04 19:11:49,159 | INFO     | [data] control thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,211 | INFO     | [payload] control thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,306 | INFO     | [job] validate thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,311 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,352 | INFO     | [job] control thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,369 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,410 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:49,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:12:06] 2025-06-04 19:11:49,955 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:50,732 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:50,795 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:51,462 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:11:58,019 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:12:06] 2025-06-04 19:11:59,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:12:06] 2025-06-04 19:12:00,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958107203392)>', '<ExcThread(monitor, started 139957448455936)>']
[2025-06-04 15:12:06] 2025-06-04 19:12:01,546 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:12:06] 2025-06-04 19:12:01,546 | INFO     | [monitor] control thread has ended
[2025-06-04 15:12:06] 2025-06-04 19:12:05,574 | INFO     | all workflow threads have been joined
[2025-06-04 15:12:06] 2025-06-04 19:12:05,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:12:06] 2025-06-04 19:12:05,578 | INFO     | traces error code: 0
[2025-06-04 15:12:06] 2025-06-04 19:12:05,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:12:06] 2025-06-04 19:12:06,202 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:12:06] 2025-06-04 19:12:06,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:12:06] 2025-06-04 19:12:06,252 [wrapper] pilotpid: 1416456
[2025-06-04 15:12:06] 2025-06-04 19:12:06,259 [wrapper] Pilot exit status: 0
[2025-06-04 15:12:06] 2025-06-04 19:12:06,326 [wrapper] pandaids: 6668313494
[2025-06-04 15:12:06] 2025-06-04 19:12:06,481 [wrapper] cleanup supervisor_pilot 2015065 1416457
[2025-06-04 15:12:06] 2025-06-04 19:12:06,512 [wrapper] Test setup, not cleaning
[2025-06-04 15:12:06] 2025-06-04 19:12:06,533 [wrapper] apfmon messages muted
[2025-06-04 15:12:06] 2025-06-04 19:12:06,562 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:12:06] 2025-06-04 19:12:06,590 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:12:06]  *** Error codes and diagnostics ***
[2025-06-04 15:12:06]     "exeErrorCode": 0,
[2025-06-04 15:12:06]     "exeErrorDiag": "",
[2025-06-04 15:12:06]     "pilotErrorCode": 0,
[2025-06-04 15:12:06]     "pilotErrorDiag": "",
[2025-06-04 15:12:06]  *** Listing of results directory ***
[2025-06-04 15:12:06] total 414904
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas    495897 May 28 05:38 pilot3.tar.gz
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas      5111 May 28 05:45 queuedata.json
[2025-06-04 15:12:06] -rwx------. 1 boincer umatlas     37140 May 28 05:46 runpilot2-wrapper.sh
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas       100 Jun  4 13:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:12:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 13:34 run_atlas
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas       105 Jun  4 13:34 job.xml
[2025-06-04 15:12:06] -rw-r--r--. 2 boincer umatlas 222034226 Jun  4 13:34 EVNT.44871834._003213.pool.root.1
[2025-06-04 15:12:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:34 start_atlas.sh
[2025-06-04 15:12:06] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 13:34 shared
[2025-06-04 15:12:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 13:34 input.tar.gz
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas         0 Jun  4 13:34 boinc_lockfile
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 13:34 pandaJob.out
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas    990984 Jun  4 13:34 agis_schedconf.cvmfs.json
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:12:06] drwx------. 4 boincer umatlas      4096 Jun  4 13:34 pilot3
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas       529 Jun  4 15:10 boinc_task_state.xml
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas 197293218 Jun  4 15:10 HITS.44871837._082316.pool.root.1
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 15:11 init_data.xml
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas        95 Jun  4 15:11 pilot_heartbeat.json
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas      1040 Jun  4 15:11 memory_monitor_summary.json
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas    310507 Jun  4 15:11 log.44871837._082316.job.log.tgz.1
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas      7706 Jun  4 15:11 heartbeat.json
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 15:11 boinc_mmap_file
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas        27 Jun  4 15:11 wrapper_checkpoint.txt
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas      4548 Jun  4 15:12 pilotlog.txt
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas    550043 Jun  4 15:12 log.44871837._082316.job.log.1
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas       357 Jun  4 15:12 output.list
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas       620 Jun  4 15:12 runtime_log
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas    880640 Jun  4 15:12 result.tar.gz
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 15:12 runtime_log.err
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas       656 Jun  4 15:12 pHfLDm6XSe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmupbKDm92UAtm.diag
[2025-06-04 15:12:06] -rw-r--r--. 1 boincer umatlas      2144 Jun  4 15:12 stderr.txt
[2025-06-04 15:12:06] HITS file was successfully produced:
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas 197293218 Jun  4 15:10 shared/HITS.pool.root.1
[2025-06-04 15:12:06]  *** Contents of shared directory: ***
[2025-06-04 15:12:06] total 410884
[2025-06-04 15:12:06] -rw-r--r--. 2 boincer umatlas 222034226 Jun  4 13:34 ATLAS.root_0
[2025-06-04 15:12:06] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:34 start_atlas.sh
[2025-06-04 15:12:06] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 13:34 input.tar.gz
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas 197293218 Jun  4 15:10 HITS.pool.root.1
[2025-06-04 15:12:06] -rw-------. 1 boincer umatlas    880640 Jun  4 15:12 result.tar.gz
15:12:08 (1411353): run_atlas exited; CPU time 41462.533742
15:12:08 (1411353): called boinc_finish(0)

</stderr_txt>
]]>

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