Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:31:54 (3607131): wrapper (7.7.26015): starting
13:31:54 (3607131): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:31:54] Arguments: --nthreads 8
[2025-06-04 13:31:54] Threads: 8
[2025-06-04 13:31:54] Checking for CVMFS
[2025-06-04 13:31:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:31:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:31:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:31:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:31:54] 2.12.6.0 861369 33103 498080 146789 0 20 36275866 40960001 12956 16776704 0 155850742 99.662 143718147 26121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 13:31:54] CVMFS is ok
[2025-06-04 13:31:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:31:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:31:54] Further information can be found at the LHC@home message board.
[2025-06-04 13:31:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:31:54] Checking for apptainer binary...
[2025-06-04 13:31:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:31:54] Running /usr/bin/apptainer --version
[2025-06-04 13:31:54] apptainer version 1.4.1-1.el9
[2025-06-04 13:31:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:31:54] c7-13-33.aglt2.org
[2025-06-04 13:31:54] apptainer works
[2025-06-04 13:31:54] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:31:54] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:31:54] Starting ATLAS job with PandaID=6677469562
[2025-06-04 13:31:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:24:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:24:19]  filetype=log
[2025-06-04 14:24:19]  guid=ab383fe1-fb03-4896-8e6f-fe6e0eaf1e80
[2025-06-04 14:24:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:24:19]  is_altstaged=None
[2025-06-04 14:24:19]  is_tar=False
[2025-06-04 14:24:19]  lfn=log.45006595._020263.job.log.tgz.1
[2025-06-04 14:24:19]  mtime=0
[2025-06-04 14:24:19]  protocol_id=None
[2025-06-04 14:24:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:24:19]  replicas=None
[2025-06-04 14:24:19]  scope=mc23_13p6TeV
[2025-06-04 14:24:19]  status=None
[2025-06-04 14:24:19]  status_code=0
[2025-06-04 14:24:19]  storage_token=
[2025-06-04 14:24:19]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677469562/log.45006595._020263.job.log.tgz.1
[2025-06-04 14:24:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/72/log.45006595._020263.job.log.tgz.1
[2025-06-04 14:24:19]  workdir=None
[2025-06-04 14:24:19] ]
[2025-06-04 14:24:19] 2025-06-04 18:23:58,672 | INFO     | transferring file log.45006595._020263.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677469562/log.45006595._020263.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:24:19] 2025-06-04 18:23:58,672 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677469562/log.45006595._020263.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._020263.job
[2025-06-04 14:24:19] 2025-06-04 18:23:58,690 | INFO     | adding to output.list: log.45006595._020263.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/72/log.45006595._020263.job.log.tg
[2025-06-04 14:24:19] 2025-06-04 18:23:58,691 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:24:19] 2025-06-04 18:23:58,691 | INFO     | summary of transferred files:
[2025-06-04 14:24:19] 2025-06-04 18:23:58,691 | INFO     |  -- lfn=log.45006595._020263.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:24:19] 2025-06-04 18:23:58,691 | INFO     | stage-out finished correctly
[2025-06-04 14:24:19] 2025-06-04 18:23:59,637 | INFO     | PID=3610727 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 14:24:19] 2025-06-04 18:23:59,637 | INFO     | .. there are 23 such processes running
[2025-06-04 14:24:19] 2025-06-04 18:24:00,941 | INFO     | monitor loop #235: job 0:6677469562 is in state 'finished'
[2025-06-04 14:24:19] 2025-06-04 18:24:00,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:24:19] 2025-06-04 18:24:01,817 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:24:19] 2025-06-04 18:24:01,890 | INFO     | job 6677469562 has state=finished
[2025-06-04 14:24:19] 2025-06-04 18:24:01,891 | INFO     | preparing for final server update for job 6677469562 in state='finished'
[2025-06-04 14:24:19] 2025-06-04 18:24:01,891 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:24:19] 2025-06-04 18:24:01,891 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:24:19] 2025-06-04 18:24:01,891 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:24:19] 2025-06-04 18:24:01,891 | INFO     | job 6677469562 has finished - writing final server update
[2025-06-04 14:24:19] 2025-06-04 18:24:01,892 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:24:19] 2025-06-04 18:24:01,908 | INFO     | executing command: lscpu
[2025-06-04 14:24:19] 2025-06-04 18:24:01,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:24:19] 2025-06-04 18:24:03,444 | INFO     | monitor loop #236: job 0:6677469562 is in state 'finished'
[2025-06-04 14:24:19] 2025-06-04 18:24:03,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:24:19] 2025-06-04 18:24:05,483 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:24:19] 2025-06-04 18:24:05,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677469562/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:24:19] 2025-06-04 18:24:05,484 | INFO     | extracted standard info from prmon json
[2025-06-04 14:24:19] 2025-06-04 18:24:05,484 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:24:19] 2025-06-04 18:24:05,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:24:19] 2025-06-04 18:24:05,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:24:19] 2025-06-04 18:24:05,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:24:19] 2025-06-04 18:24:05,485 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | sum of square deviations: 26400495.0
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | sum of deviations: -5449752596.5
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | mean x: 1749059964.5
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | mean y: 2473326.7045454546
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | -- intersect: 361054191598.20184
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | intersect: 361054191598.20184
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | chi2: 0.09784436029253621
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | -- intersect: 361054191598.20184
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | current memory leak: -206.43 B/s (using 44 data points, chi2=0.10)
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | ..............................
[2025-06-04 14:24:19] 2025-06-04 18:24:05,486 | INFO     | . Timing measurements:
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . get job = 0 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . initial setup = 2 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . payload setup = 6 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . stage-in = 0 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . payload execution = 3090 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . stage-out = 0 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | . log creation = 0 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,487 | INFO     | ..............................
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | 
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | job summary report
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | --------------------------------------------------
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | PanDA job id: 6677469562
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | task id: 45006595
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | errors: (none)
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | pilot state: finished 
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | transexitcode: 0
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | exeerrorcode: 0
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | exeerrordiag: 
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | exitcode: 0
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | exitmsg: OK
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | cpuconsumptiontime: 22748 s
[2025-06-04 14:24:19] 2025-06-04 18:24:05,689 | INFO     | nevents: 400
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | neventsw: 0
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | pid: 3620774
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | pgrp: 3620774
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | corecount: 8
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | event service: False
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | sizes: {0: 2397340, 3: 2397546, 11: 2397574, 3100: 2423019, 3101: 2431960, 3104: 2432016, 3108: 2432314}
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | --------------------------------------------------
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | 
[2025-06-04 14:24:19] 2025-06-04 18:24:05,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:24:19] 2025-06-04 18:24:05,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:24:19] 2025-06-04 18:24:05,709 | INFO     | job 6677469562 has completed (purged errors)
[2025-06-04 14:24:19] 2025-06-04 18:24:05,710 | INFO     | overall cleanup function is called
[2025-06-04 14:24:19] 2025-06-04 18:24:06,718 | INFO     | --- collectZombieJob: --- 10, [3620774]
[2025-06-04 14:24:19] 2025-06-04 18:24:06,718 | INFO     | zombie collector waiting for pid 3620774
[2025-06-04 14:24:19] 2025-06-04 18:24:06,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:24:19] 2025-06-04 18:24:06,718 | INFO     | collected zombie processes
[2025-06-04 14:24:19] 2025-06-04 18:24:06,718 | INFO     | will attempt to kill all subprocesses of pid=3620774
[2025-06-04 14:24:19] 2025-06-04 18:24:06,959 | INFO     | process IDs to be killed: [3620774] (in reverse order)
[2025-06-04 14:24:19] 2025-06-04 18:24:07,047 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:24:19] 2025-06-04 18:24:07,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:24:19] 2025-06-04 18:24:07,056 | INFO     | did not find any defunct processes belonging to 3620774
[2025-06-04 14:24:19] 2025-06-04 18:24:07,064 | INFO     | did not find any defunct processes belonging to 3620774
[2025-06-04 14:24:19] 2025-06-04 18:24:07,064 | INFO     | ready for new job
[2025-06-04 14:24:19] 2025-06-04 18:24:07,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:24:19] 2025-06-04 18:24:07,065 | INFO     | **************************************
[2025-06-04 14:24:19] 2025-06-04 18:24:07,065 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:24:19] 2025-06-04 18:24:07,065 | INFO     | **************************************
[2025-06-04 14:24:19] 2025-06-04 18:24:07,065 | INFO     | 
[2025-06-04 14:24:19] 2025-06-04 18:24:07,080 | INFO     | architecture information:
[2025-06-04 14:24:19] 2025-06-04 18:24:07,080 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:24:19] 2025-06-04 18:24:07,097 | INFO     | cat /etc/os-release:
[2025-06-04 14:24:19] NAME="CentOS Linux"
[2025-06-04 14:24:19] VERSION="7 (Core)"
[2025-06-04 14:24:19] ID="centos"
[2025-06-04 14:24:19] ID_LIKE="rhel fedora"
[2025-06-04 14:24:19] VERSION_ID="7"
[2025-06-04 14:24:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:24:19] ANSI_COLOR="0;31"
[2025-06-04 14:24:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:24:19] HOME_URL="https://www.centos.org/"
[2025-06-04 14:24:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:24:19] 
[2025-06-04 14:24:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:24:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:24:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:24:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:24:19] 
[2025-06-04 14:24:19] 2025-06-04 18:24:07,097 | INFO     | **************************************
[2025-06-04 14:24:19] 2025-06-04 18:24:07,598 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:24:19] 2025-06-04 18:24:07,612 | INFO     | sufficient remaining disk space (86521151488 B)
[2025-06-04 14:24:19] 2025-06-04 18:24:07,613 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:24:19] 2025-06-04 18:24:07,613 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:24:19] 2025-06-04 18:24:07,613 | INFO     | update_server=False
[2025-06-04 14:24:19] 2025-06-04 18:24:07,613 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:24:19] 2025-06-04 18:24:07,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:24:19] 2025-06-04 18:24:07,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:24:19] 2025-06-04 18:24:07,614 | INFO     | aborting loop
[2025-06-04 14:24:19] 2025-06-04 18:24:07,660 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:24:19] 2025-06-04 18:24:07,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:24:19] 2025-06-04 18:24:07,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:24:19] 2025-06-04 18:24:07,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:24:19] 2025-06-04 18:24:08,343 | INFO     | all data control threads have been joined
[2025-06-04 14:24:19] 2025-06-04 18:24:08,440 | INFO     | all job control threads have been joined
[2025-06-04 14:24:19] 2025-06-04 18:24:08,618 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:08,619 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:08,781 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,001 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,066 | INFO     | all payload control threads have been joined
[2025-06-04 14:24:19] 2025-06-04 18:24:09,348 | INFO     | [data] control thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,445 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,446 | INFO     | [job] control thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,617 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,677 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,747 | INFO     | [job] validate thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,841 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:09,919 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:10,070 | INFO     | [payload] control thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:10,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:10,552 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:24:19] 2025-06-04 18:24:11,557 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:11,902 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:24:19] 2025-06-04 18:24:13,864 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015097706304)>', '<ExcThread(monitor, started 140014256125696)>']
[2025-06-04 14:24:19] 2025-06-04 18:24:14,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:24:19] 2025-06-04 18:24:14,696 | INFO     | [monitor] control thread has ended
[2025-06-04 14:24:19] 2025-06-04 18:24:18,890 | INFO     | all workflow threads have been joined
[2025-06-04 14:24:19] 2025-06-04 18:24:18,890 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:24:19] 2025-06-04 18:24:18,890 | INFO     | traces error code: 0
[2025-06-04 14:24:19] 2025-06-04 18:24:18,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:24:19] 2025-06-04 18:24:18,975 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:24:19] 2025-06-04 18:24:18,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:24:19] 2025-06-04 18:24:18,981 [wrapper] pilotpid: 3610727
[2025-06-04 14:24:19] 2025-06-04 18:24:18,984 [wrapper] Pilot exit status: 0
[2025-06-04 14:24:19] 2025-06-04 18:24:18,994 [wrapper] pandaids: 6677469562
[2025-06-04 14:24:19] 2025-06-04 18:24:19,055 [wrapper] cleanup supervisor_pilot 3754748 3610728
[2025-06-04 14:24:19] 2025-06-04 18:24:19,058 [wrapper] Test setup, not cleaning
[2025-06-04 14:24:19] 2025-06-04 18:24:19,060 [wrapper] apfmon messages muted
[2025-06-04 14:24:19] 2025-06-04 18:24:19,062 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:24:19] 2025-06-04 18:24:19,065 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:24:19]  *** Error codes and diagnostics ***
[2025-06-04 14:24:19]     "exeErrorCode": 0,
[2025-06-04 14:24:19]     "exeErrorDiag": "",
[2025-06-04 14:24:19]     "pilotErrorCode": 0,
[2025-06-04 14:24:19]     "pilotErrorDiag": "",
[2025-06-04 14:24:19]  *** Listing of results directory ***
[2025-06-04 14:24:19] total 396104
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 00:53 pilot3.tar.gz
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 01:05 queuedata.json
[2025-06-04 14:24:19] -rwx------. 1 boincer umatlas     37140 Jun  3 01:06 runpilot2-wrapper.sh
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas       100 Jun  4 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:24:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 13:31 run_atlas
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas       105 Jun  4 13:31 job.xml
[2025-06-04 14:24:19] -rw-r--r--. 2 boincer umatlas 217262916 Jun  4 13:31 EVNT.45006593._000811.pool.root.1
[2025-06-04 14:24:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:31 start_atlas.sh
[2025-06-04 14:24:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 13:31 shared
[2025-06-04 14:24:19] -rw-r--r--. 2 boincer umatlas    508890 Jun  4 13:31 input.tar.gz
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas         0 Jun  4 13:31 boinc_lockfile
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 13:31 pandaJob.out
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas    990984 Jun  4 13:32 agis_schedconf.cvmfs.json
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:24:19] drwx------. 4 boincer umatlas      4096 Jun  4 13:32 pilot3
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 14:22 init_data.xml
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas       529 Jun  4 14:23 boinc_task_state.xml
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas 183294774 Jun  4 14:23 HITS.45006595._020263.pool.root.1
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas      1025 Jun  4 14:23 memory_monitor_summary.json
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas    282758 Jun  4 14:23 log.45006595._020263.job.log.tgz.1
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas        95 Jun  4 14:23 pilot_heartbeat.json
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas      7687 Jun  4 14:24 heartbeat.json
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas        27 Jun  4 14:24 wrapper_checkpoint.txt
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:24 boinc_mmap_file
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas      4353 Jun  4 14:24 pilotlog.txt
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas    324445 Jun  4 14:24 log.45006595._020263.job.log.1
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas       357 Jun  4 14:24 output.list
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:24 runtime_log
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas    624640 Jun  4 14:24 result.tar.gz
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 14:24 runtime_log.err
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas       652 Jun  4 14:24 qVfNDmL2Yg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV5hKDmmEULen.diag
[2025-06-04 14:24:19] -rw-r--r--. 1 boincer umatlas     21290 Jun  4 14:24 stderr.txt
[2025-06-04 14:24:19] HITS file was successfully produced:
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas 183294774 Jun  4 14:23 shared/HITS.pool.root.1
[2025-06-04 14:24:19]  *** Contents of shared directory: ***
[2025-06-04 14:24:19] total 392308
[2025-06-04 14:24:19] -rw-r--r--. 2 boincer umatlas 217262916 Jun  4 13:31 ATLAS.root_0
[2025-06-04 14:24:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:31 start_atlas.sh
[2025-06-04 14:24:19] -rw-r--r--. 2 boincer umatlas    508890 Jun  4 13:31 input.tar.gz
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas 183294774 Jun  4 14:23 HITS.pool.root.1
[2025-06-04 14:24:19] -rw-------. 1 boincer umatlas    624640 Jun  4 14:24 result.tar.gz
14:24:20 (3607131): run_atlas exited; CPU time 22757.162219
14:24:20 (3607131): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN