Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:10:32 (20824): wrapper (7.7.26015): starting
02:10:32 (20824): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:10:32] Arguments: --nthreads 8
[2025-06-05 02:10:32] Threads: 8
[2025-06-05 02:10:32] Checking for CVMFS
[2025-06-05 02:10:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:10:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:10:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:10:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:10:34] 2.11.2.0 32329 34022 91924 146798 2 200 15712598 25165825 4684 130560 0 17911159 99.796 20645437 2267 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:10:34] CVMFS is ok
[2025-06-05 02:10:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:10:34] Checking for apptainer binary...
[2025-06-05 02:10:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:10:34] Running /usr/bin/apptainer --version
[2025-06-05 02:10:34] apptainer version 1.3.2-1.el7
[2025-06-05 02:10:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:10:45] cg-vwn362.simple-grid.lan
[2025-06-05 02:10:45] apptainer works
[2025-06-05 02:10:45] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:10:45] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:10:45] Starting ATLAS job with PandaID=6666948860
[2025-06-05 02:10:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:47:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:47:53] 2025-06-05 05:40:42,537 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 07:47:53] 2025-06-05 05:40:42,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 07:47:53] 2025-06-05 05:40:42,537 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:47:53] 2025-06-05 05:40:42,537 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:47:53] 2025-06-05 05:40:42,544 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:47:53] 2025-06-05 05:40:42,545 | INFO     | sum of square deviations: 9417545878.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,548 | INFO     | sum of deviations: 62319751073.500015
[2025-06-05 07:47:53] 2025-06-05 05:40:42,548 | INFO     | mean x: 1749092441.5
[2025-06-05 07:47:53] 2025-06-05 05:40:42,549 | INFO     | mean y: 2477764.887820513
[2025-06-05 07:47:53] 2025-06-05 05:40:42,549 | INFO     | -- intersect: -11571981969.19837
[2025-06-05 07:47:53] 2025-06-05 05:40:42,549 | INFO     | intersect: -11571981969.19837
[2025-06-05 07:47:53] 2025-06-05 05:40:42,549 | INFO     | chi2: 6.638364103132323
[2025-06-05 07:47:53] 2025-06-05 05:40:42,550 | INFO     | sum of square deviations: 8971993338.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,553 | INFO     | sum of deviations: 81558392019.99995
[2025-06-05 07:47:53] 2025-06-05 05:40:42,553 | INFO     | mean x: 1749092289.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,553 | INFO     | mean y: 2484258.1302931597
[2025-06-05 07:47:53] 2025-06-05 05:40:42,553 | INFO     | -- intersect: -15897344153.60376
[2025-06-05 07:47:53] 2025-06-05 05:40:42,557 | INFO     | intersect: -15897344153.60376
[2025-06-05 07:47:53] 2025-06-05 05:40:42,558 | INFO     | chi2: 5.914205242164201
[2025-06-05 07:47:53] 2025-06-05 05:40:42,558 | INFO     | current chi2=5.914205242164201 (change=10.908694517470458 %)
[2025-06-05 07:47:53] 2025-06-05 05:40:42,558 | INFO     | right removable region: 306
[2025-06-05 07:47:53] 2025-06-05 05:40:42,558 | INFO     | sum of square deviations: 8971993338.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,561 | INFO     | sum of deviations: -46843633559.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,562 | INFO     | mean x: 1749092594.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,562 | INFO     | mean y: 2515101.4690553746
[2025-06-05 07:47:53] 2025-06-05 05:40:42,562 | INFO     | -- intersect: 9134694478.717804
[2025-06-05 07:47:53] 2025-06-05 05:40:42,562 | INFO     | intersect: 9134694478.717804
[2025-06-05 07:47:53] 2025-06-05 05:40:42,562 | INFO     | chi2: 1.9618356654656472
[2025-06-05 07:47:53] 2025-06-05 05:40:42,563 | INFO     | current chi2=1.9618356654656472 (change=70.44700117397971 %)
[2025-06-05 07:47:53] 2025-06-05 05:40:42,563 | INFO     | sum of square deviations: 8540720135.5
[2025-06-05 07:47:53] 2025-06-05 05:40:42,566 | INFO     | sum of deviations: -87748239743.5
[2025-06-05 07:47:53] 2025-06-05 05:40:42,567 | INFO     | mean x: 1749092746.5
[2025-06-05 07:47:53] 2025-06-05 05:40:42,567 | INFO     | mean y: 2529487.6523178807
[2025-06-05 07:47:53] 2025-06-05 05:40:42,567 | INFO     | -- intersect: 17972888803.789036
[2025-06-05 07:47:53] 2025-06-05 05:40:42,567 | INFO     | intersect: 17972888803.789036
[2025-06-05 07:47:53] 2025-06-05 05:40:42,567 | INFO     | chi2: 1.0555915394373092
[2025-06-05 07:47:53] 2025-06-05 05:40:42,567 | INFO     | current chi2=1.0555915394373092 (change=46.19368186546035 %)
[2025-06-05 07:47:53] 2025-06-05 05:40:42,568 | INFO     | sum of square deviations: 8123493708.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,574 | INFO     | sum of deviations: -87722807288.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,574 | INFO     | mean x: 1749092899.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,575 | INFO     | mean y: 2529459.2255892255
[2025-06-05 07:47:53] 2025-06-05 05:40:42,575 | INFO     | -- intersect: 18890380527.132915
[2025-06-05 07:47:53] 2025-06-05 05:40:42,575 | INFO     | intersect: 18890380527.132915
[2025-06-05 07:47:53] 2025-06-05 05:40:42,575 | INFO     | chi2: 1.0365947034739245
[2025-06-05 07:47:53] 2025-06-05 05:40:42,576 | INFO     | current chi2=1.0365947034739245 (change=1.7996388994848473 %)
[2025-06-05 07:47:53] 2025-06-05 05:40:42,576 | INFO     | left removable region: 30
[2025-06-05 07:47:53] 2025-06-05 05:40:42,576 | INFO     | sum of square deviations: 6519285025.0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,579 | INFO     | sum of deviations: -38855207820.000015
[2025-06-05 07:47:53] 2025-06-05 05:40:42,579 | INFO     | mean x: 1749093173.5
[2025-06-05 07:47:53] 2025-06-05 05:40:42,579 | INFO     | mean y: 2525774.862318841
[2025-06-05 07:47:53] 2025-06-05 05:40:42,579 | INFO     | -- intersect: 10427193279.39221
[2025-06-05 07:47:53] 2025-06-05 05:40:42,579 | INFO     | intersect: 10427193279.39221
[2025-06-05 07:47:53] 2025-06-05 05:40:42,580 | INFO     | chi2: 0.20169486999436964
[2025-06-05 07:47:53] 2025-06-05 05:40:42,580 | INFO     | -- intersect: 10427193279.39221
[2025-06-05 07:47:53] 2025-06-05 05:40:42,580 | INFO     | current memory leak: -5.96 B/s (using 276 data points, chi2=0.20)
[2025-06-05 07:47:53] 2025-06-05 05:40:42,581 | INFO     | ..............................
[2025-06-05 07:47:53] 2025-06-05 05:40:42,581 | INFO     | . Timing measurements:
[2025-06-05 07:47:53] 2025-06-05 05:40:42,581 | INFO     | . get job = 0 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,581 | INFO     | . initial setup = 8 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,585 | INFO     | . payload setup = 163 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,585 | INFO     | . stage-in = 0 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,585 | INFO     | . payload execution = 19139 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,585 | INFO     | . stage-out = 7 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,585 | INFO     | . log creation = 1 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,585 | INFO     | ..............................
[2025-06-05 07:47:53] 2025-06-05 05:40:42,782 | INFO     | 
[2025-06-05 07:47:53] 2025-06-05 05:40:42,782 | INFO     | job summary report
[2025-06-05 07:47:53] 2025-06-05 05:40:42,782 | INFO     | --------------------------------------------------
[2025-06-05 07:47:53] 2025-06-05 05:40:42,782 | INFO     | PanDA job id: 6666948860
[2025-06-05 07:47:53] 2025-06-05 05:40:42,782 | INFO     | task id: 44871837
[2025-06-05 07:47:53] 2025-06-05 05:40:42,782 | INFO     | errors: (none)
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | pilot state: finished 
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | transexitcode: 0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | exeerrorcode: 0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | exeerrordiag: 
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | exitcode: 0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | exitmsg: OK
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | cpuconsumptiontime: 72934 s
[2025-06-05 07:47:53] 2025-06-05 05:40:42,783 | INFO     | nevents: 400
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | neventsw: 0
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | pid: 3381
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | pgrp: 3381
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | corecount: 8
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | event service: False
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | sizes: {0: 2397221, 1: 2397420, 2: 2397420, 12: 2397448, 23: 2397476, 34: 2397504, 45: 2397660, 55: 2397688, 66: 2397716, 77: 2397744, 88: 2397800, 96: 2398314, 98
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | --------------------------------------------------
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | 
[2025-06-05 07:47:53] 2025-06-05 05:40:42,784 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-05 07:47:53] 2025-06-05 05:40:43,275 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:47:53] 2025-06-05 05:40:43,277 | INFO     | job 6666948860 has completed (purged errors)
[2025-06-05 07:47:53] 2025-06-05 05:40:43,278 | INFO     | overall cleanup function is called
[2025-06-05 07:47:53] 2025-06-05 05:40:44,287 | INFO     | --- collectZombieJob: --- 10, [3381]
[2025-06-05 07:47:53] 2025-06-05 05:40:44,287 | INFO     | zombie collector waiting for pid 3381
[2025-06-05 07:47:53] 2025-06-05 05:40:44,287 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:47:53] 2025-06-05 05:40:44,287 | INFO     | collected zombie processes
[2025-06-05 07:47:53] 2025-06-05 05:40:44,287 | INFO     | will attempt to kill all subprocesses of pid=3381
[2025-06-05 07:47:53] 2025-06-05 05:40:44,390 | INFO     | process IDs to be killed: [3381] (in reverse order)
[2025-06-05 07:47:53] 2025-06-05 05:40:45,391 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:47:53] 2025-06-05 05:40:45,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:47:53] 2025-06-05 05:40:45,394 | INFO     | did not find any defunct processes belonging to 3381
[2025-06-05 07:47:53] 2025-06-05 05:40:45,397 | INFO     | did not find any defunct processes belonging to 3381
[2025-06-05 07:47:53] 2025-06-05 05:40:45,398 | INFO     | ready for new job
[2025-06-05 07:47:53] 2025-06-05 05:40:45,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:47:53] 2025-06-05 05:40:45,405 | INFO     | **************************************
[2025-06-05 07:47:53] 2025-06-05 05:40:45,406 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:47:53] 2025-06-05 05:40:45,406 | INFO     | **************************************
[2025-06-05 07:47:53] 2025-06-05 05:40:45,406 | INFO     | 
[2025-06-05 07:47:53] 2025-06-05 05:40:45,406 | INFO     | pilot is running in a VM
[2025-06-05 07:47:53] 2025-06-05 05:40:45,406 | INFO     | architecture information:
[2025-06-05 07:47:53] 2025-06-05 05:40:45,430 | INFO     | PID=25136 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 07:47:53] 2025-06-05 05:40:45,430 | INFO     | .. there are 9 such processes running
[2025-06-05 07:47:53] 2025-06-05 05:40:45,431 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:47:53] 2025-06-05 05:40:45,724 | INFO     | cat /etc/os-release:
[2025-06-05 07:47:53] NAME="CentOS Linux"
[2025-06-05 07:47:53] VERSION="7 (Core)"
[2025-06-05 07:47:53] ID="centos"
[2025-06-05 07:47:53] ID_LIKE="rhel fedora"
[2025-06-05 07:47:53] VERSION_ID="7"
[2025-06-05 07:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:47:53] ANSI_COLOR="0;31"
[2025-06-05 07:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:47:53] HOME_URL="https://www.centos.org/"
[2025-06-05 07:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:47:53] 
[2025-06-05 07:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:47:53] 
[2025-06-05 07:47:53] 2025-06-05 05:40:45,724 | INFO     | **************************************
[2025-06-05 07:47:53] 2025-06-05 05:40:46,228 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-05 07:47:53] 2025-06-05 05:40:46,548 | INFO     | sufficient remaining disk space (496540581888 B)
[2025-06-05 07:47:53] 2025-06-05 05:40:46,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:47:53] 2025-06-05 05:40:46,549 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:47:53] 2025-06-05 05:40:46,549 | INFO     | update_server=False
[2025-06-05 07:47:53] 2025-06-05 05:40:46,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:47:53] 2025-06-05 05:40:46,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:47:53] 2025-06-05 05:40:46,562 | INFO     | all job control threads have been joined
[2025-06-05 07:47:53] 2025-06-05 05:40:46,667 | INFO     | all data control threads have been joined
[2025-06-05 07:47:53] 2025-06-05 05:40:46,712 | INFO     | all payload control threads have been joined
[2025-06-05 07:47:53] 2025-06-05 05:40:46,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:47:53] 2025-06-05 05:40:46,952 | INFO     | aborting loop
[2025-06-05 07:47:53] 2025-06-05 05:40:47,440 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:47:53] 2025-06-05 05:40:47,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:47:53] 2025-06-05 05:40:47,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:47:53] 2025-06-05 05:40:47,556 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:47,568 | INFO     | [job] control thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:47,673 | INFO     | [data] control thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:47,718 | INFO     | [payload] control thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:47,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:47:53] 2025-06-05 05:40:47,958 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:47,980 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,002 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,097 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,180 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,183 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,557 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,752 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,801 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:48,816 | INFO     | [job] validate thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:49,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:47:53] 2025-06-05 05:40:53,119 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:47:53] 2025-06-05 05:40:54,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059259479872)>', '<ExcThread(monitor, started 140058682193664)>']
[2025-06-05 07:47:53] 2025-06-05 05:40:54,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:47:53] 2025-06-05 05:40:54,481 | INFO     | [monitor] control thread has ended
[2025-06-05 07:47:53] 2025-06-05 05:40:59,390 | INFO     | all workflow threads have been joined
[2025-06-05 07:47:53] 2025-06-05 05:40:59,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:47:53] 2025-06-05 05:40:59,390 | INFO     | traces error code: 0
[2025-06-05 07:47:53] 2025-06-05 05:40:59,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:47:53] 2025-06-05 05:40:59,792 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:47:53] 2025-06-05 05:40:59,898 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:47:53] 2025-06-05 05:40:59,969 [wrapper] pilotpid: 25136
[2025-06-05 07:47:53] 2025-06-05 05:41:00,080 [wrapper] Pilot exit status: 0
[2025-06-05 07:47:53] 2025-06-05 05:41:00,614 [wrapper] pandaids: 6666948860
[2025-06-05 07:47:53] 2025-06-05 05:41:01,323 [wrapper] cleanup supervisor_pilot  4433 25137
[2025-06-05 07:47:53] 2025-06-05 05:41:01,424 [wrapper] Test setup, not cleaning
[2025-06-05 07:47:53] 2025-06-05 05:41:01,500 [wrapper] apfmon messages muted
[2025-06-05 07:47:53] 2025-06-05 05:41:01,581 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:47:53] 2025-06-05 05:41:01,690 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:47:53]  *** Error codes and diagnostics ***
[2025-06-05 07:47:53]     "exeErrorCode": 0,
[2025-06-05 07:47:53]     "exeErrorDiag": "",
[2025-06-05 07:47:53]     "pilotErrorCode": 0,
[2025-06-05 07:47:53]     "pilotErrorDiag": "",
[2025-06-05 07:47:53]  *** Listing of results directory ***
[2025-06-05 07:47:53] total 420996
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc    495897 May 27 12:25 pilot3.tar.gz
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc      5111 May 27 13:08 queuedata.json
[2025-06-05 07:47:53] -rwx------. 1 boinc boinc     37140 May 27 13:09 runpilot2-wrapper.sh
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:47:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:10 run_atlas
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:10 job.xml
[2025-06-05 07:47:53] -rw-r--r--. 2 boinc boinc 226037404 Jun  5 02:10 EVNT.44871834._002615.pool.root.1
[2025-06-05 07:47:53] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:10 start_atlas.sh
[2025-06-05 07:47:53] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:10 shared
[2025-06-05 07:47:53] -rw-r--r--. 2 boinc boinc    508877 Jun  5 02:10 input.tar.gz
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc      6392 Jun  5 02:10 init_data.xml
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:10 boinc_lockfile
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc      2559 Jun  5 02:10 pandaJob.out
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc    987117 Jun  5 02:14 agis_schedconf.cvmfs.json
[2025-06-05 07:47:53] drwx------. 4 boinc boinc      4096 Jun  5 02:14 pilot3
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc 197086636 Jun  5 07:37 HITS.44871837._066421.pool.root.1
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc       531 Jun  5 07:37 boinc_task_state.xml
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc      1015 Jun  5 07:38 memory_monitor_summary.json
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc   1598969 Jun  5 07:39 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc    426129 Jun  5 07:39 log.44871837._066421.job.log.tgz.1
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc        95 Jun  5 07:39 pilot_heartbeat.json
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc      7702 Jun  5 07:40 heartbeat.json
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc      4808 Jun  5 07:40 pilotlog.txt
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc   1652438 Jun  5 07:41 log.44871837._066421.job.log.1
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc       357 Jun  5 07:41 output.list
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc       620 Jun  5 07:41 runtime_log
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc   2099200 Jun  5 07:41 result.tar.gz
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc      8659 Jun  5 07:41 runtime_log.err
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc       657 Jun  5 07:41 43nKDmwM7d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeEZKDmRPBIGm.diag
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc      8192 Jun  5 07:47 boinc_mmap_file
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc        28 Jun  5 07:47 wrapper_checkpoint.txt
[2025-06-05 07:47:53] -rw-r--r--. 1 boinc boinc     20578 Jun  5 07:47 stderr.txt
[2025-06-05 07:47:53] HITS file was successfully produced:
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc 197086636 Jun  5 07:37 shared/HITS.pool.root.1
[2025-06-05 07:47:53]  *** Contents of shared directory: ***
[2025-06-05 07:47:53] total 415776
[2025-06-05 07:47:53] -rw-r--r--. 2 boinc boinc 226037404 Jun  5 02:10 ATLAS.root_0
[2025-06-05 07:47:53] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:10 start_atlas.sh
[2025-06-05 07:47:53] -rw-r--r--. 2 boinc boinc    508877 Jun  5 02:10 input.tar.gz
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc 197086636 Jun  5 07:37 HITS.pool.root.1
[2025-06-05 07:47:53] -rw-------. 1 boinc boinc   2099200 Jun  5 07:41 result.tar.gz
07:47:55 (20824): run_atlas exited; CPU time 73205.923762
07:47:55 (20824): called boinc_finish(0)

</stderr_txt>
]]>

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