Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:26:09 (15763): wrapper (7.7.26015): starting
13:26:09 (15763): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 13:26:09] Arguments: --nthreads 12
[2025-06-04 13:26:09] Threads: 12
[2025-06-04 13:26:09] Checking for CVMFS
[2025-06-04 13:26:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:26:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:26:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:26:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:26:09] 2.11.2.0 2981 35933 87116 146789 0 1 18943805 20275201 1 130560 0 16888455 99.983 6844492 8115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 13:26:09] CVMFS is ok
[2025-06-04 13:26:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:26:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:26:09] Further information can be found at the LHC@home message board.
[2025-06-04 13:26:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:26:09] Checking for apptainer binary...
[2025-06-04 13:26:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:26:09] Running /usr/bin/apptainer --version
[2025-06-04 13:26:09] apptainer version 1.3.2-1.el7
[2025-06-04 13:26:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:26:11] c-205-30.aglt2.org
[2025-06-04 13:26:11] apptainer works
[2025-06-04 13:26:11] Set ATHENA_PROC_NUMBER=12
[2025-06-04 13:26:11] Set ATHENA_CORE_NUMBER=12
[2025-06-04 13:26:11] Starting ATLAS job with PandaID=6668439244
[2025-06-04 13:26:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:59:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:59:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:59:45]  is_altstaged=None
[2025-06-04 14:59:45]  is_tar=False
[2025-06-04 14:59:45]  lfn=log.44871837._083580.job.log.tgz.1
[2025-06-04 14:59:45]  mtime=0
[2025-06-04 14:59:45]  protocol_id=None
[2025-06-04 14:59:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:59:45]  replicas=None
[2025-06-04 14:59:45]  scope=mc23_13p6TeV
[2025-06-04 14:59:45]  status=None
[2025-06-04 14:59:45]  status_code=0
[2025-06-04 14:59:45]  storage_token=
[2025-06-04 14:59:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668439244/log.44871837._083580.job.log.tgz.1
[2025-06-04 14:59:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/41/log.44871837._083580.job.log.tgz.1
[2025-06-04 14:59:45]  workdir=None
[2025-06-04 14:59:45] ]
[2025-06-04 14:59:45] 2025-06-04 18:59:28,584 | INFO     | transferring file log.44871837._083580.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668439244/log.44871837._083580.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:59:45] 2025-06-04 18:59:28,584 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668439244/log.44871837._083580.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._083580.job
[2025-06-04 14:59:45] 2025-06-04 18:59:28,605 | INFO     | adding to output.list: log.44871837._083580.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/41/log.44871837._083580.job.log.tg
[2025-06-04 14:59:45] 2025-06-04 18:59:28,606 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:59:45] 2025-06-04 18:59:28,607 | INFO     | summary of transferred files:
[2025-06-04 14:59:45] 2025-06-04 18:59:28,607 | INFO     |  -- lfn=log.44871837._083580.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:59:45] 2025-06-04 18:59:28,607 | INFO     | stage-out finished correctly
[2025-06-04 14:59:45] 2025-06-04 18:59:29,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:59:45] 2025-06-04 18:59:29,761 | INFO     | job 6668439244 has state=finished
[2025-06-04 14:59:45] 2025-06-04 18:59:29,761 | INFO     | preparing for final server update for job 6668439244 in state='finished'
[2025-06-04 14:59:45] 2025-06-04 18:59:29,762 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:59:45] 2025-06-04 18:59:29,762 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:59:45] 2025-06-04 18:59:29,762 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:59:45] 2025-06-04 18:59:29,762 | INFO     | job 6668439244 has finished - writing final server update
[2025-06-04 14:59:45] 2025-06-04 18:59:29,763 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:59:45] 2025-06-04 18:59:29,764 | INFO     | executing command: lscpu
[2025-06-04 14:59:45] 2025-06-04 18:59:29,791 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:59:45] 2025-06-04 18:59:31,152 | WARNING  | process 26267 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:59:45] 2025-06-04 18:59:31,152 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668439244/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:59:45] 2025-06-04 18:59:31,253 | INFO     | number of running child processes to parent process 26267: 1
[2025-06-04 14:59:45] 2025-06-04 18:59:31,253 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:59:45] 2025-06-04 18:59:33,756 | INFO     | monitor loop #417: job 0:6668439244 is in state 'finished'
[2025-06-04 14:59:45] 2025-06-04 18:59:33,756 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:59:45] 2025-06-04 18:59:34,287 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 14:59:45] 2025-06-04 18:59:34,287 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668439244/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:59:45] 2025-06-04 18:59:34,288 | INFO     | extracted standard info from prmon json
[2025-06-04 14:59:45] 2025-06-04 18:59:34,288 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:59:45] 2025-06-04 18:59:34,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:59:45] 2025-06-04 18:59:34,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:59:45] 2025-06-04 18:59:34,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:59:45] 2025-06-04 18:59:34,291 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:59:45] 2025-06-04 18:59:34,291 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 14:59:45] 2025-06-04 18:59:34,291 | INFO     | sum of deviations: -9330566374.5
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | mean x: 1749060851.5
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | mean y: 2777450.0833333335
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | -- intersect: 88812026499.38947
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | intersect: 88812026499.38947
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | chi2: 0.15846608216045627
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | -- intersect: 88812026499.38947
[2025-06-04 14:59:45] 2025-06-04 18:59:34,292 | INFO     | current memory leak: -50.78 B/s (using 84 data points, chi2=0.16)
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | ..............................
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . Timing measurements:
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . get job = 0 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . initial setup = 2 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . payload setup = 9 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . stage-in = 0 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . payload execution = 5553 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,293 | INFO     | . stage-out = 0 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,294 | INFO     | . log creation = 0 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,294 | INFO     | ..............................
[2025-06-04 14:59:45] 2025-06-04 18:59:34,378 | INFO     | 
[2025-06-04 14:59:45] 2025-06-04 18:59:34,378 | INFO     | job summary report
[2025-06-04 14:59:45] 2025-06-04 18:59:34,378 | INFO     | --------------------------------------------------
[2025-06-04 14:59:45] 2025-06-04 18:59:34,378 | INFO     | PanDA job id: 6668439244
[2025-06-04 14:59:45] 2025-06-04 18:59:34,378 | INFO     | task id: 44871837
[2025-06-04 14:59:45] 2025-06-04 18:59:34,379 | INFO     | errors: (none)
[2025-06-04 14:59:45] 2025-06-04 18:59:34,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:59:45] 2025-06-04 18:59:34,379 | INFO     | pilot state: finished 
[2025-06-04 14:59:45] 2025-06-04 18:59:34,379 | INFO     | transexitcode: 0
[2025-06-04 14:59:45] 2025-06-04 18:59:34,379 | INFO     | exeerrorcode: 0
[2025-06-04 14:59:45] 2025-06-04 18:59:34,379 | INFO     | exeerrordiag: 
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | exitcode: 0
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | exitmsg: OK
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | cpuconsumptiontime: 60070 s
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | nevents: 400
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | neventsw: 0
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | pid: 26267
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | pgrp: 26267
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | corecount: 12
[2025-06-04 14:59:45] 2025-06-04 18:59:34,380 | INFO     | event service: False
[2025-06-04 14:59:45] 2025-06-04 18:59:34,381 | INFO     | sizes: {0: 2396564, 1: 2397420, 6: 2397626, 12: 2397654, 5566: 2424099, 5567: 2424098, 5569: 2433223, 5570: 2433279, 5574: 2433449}
[2025-06-04 14:59:45] 2025-06-04 18:59:34,381 | INFO     | --------------------------------------------------
[2025-06-04 14:59:45] 2025-06-04 18:59:34,381 | INFO     | 
[2025-06-04 14:59:45] 2025-06-04 18:59:34,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:59:45] 2025-06-04 18:59:34,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:59:45] 2025-06-04 18:59:34,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:59:45] 2025-06-04 18:59:34,405 | INFO     | job 6668439244 has completed (purged errors)
[2025-06-04 14:59:45] 2025-06-04 18:59:34,405 | INFO     | overall cleanup function is called
[2025-06-04 14:59:45] 2025-06-04 18:59:35,409 | INFO     | --- collectZombieJob: --- 10, [26267]
[2025-06-04 14:59:45] 2025-06-04 18:59:35,409 | INFO     | zombie collector waiting for pid 26267
[2025-06-04 14:59:45] 2025-06-04 18:59:35,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:59:45] 2025-06-04 18:59:35,409 | INFO     | collected zombie processes
[2025-06-04 14:59:45] 2025-06-04 18:59:35,410 | INFO     | will attempt to kill all subprocesses of pid=26267
[2025-06-04 14:59:45] 2025-06-04 18:59:35,502 | INFO     | process IDs to be killed: [26267] (in reverse order)
[2025-06-04 14:59:45] 2025-06-04 18:59:35,551 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:59:45] 2025-06-04 18:59:35,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:59:45] 2025-06-04 18:59:35,555 | INFO     | did not find any defunct processes belonging to 26267
[2025-06-04 14:59:45] 2025-06-04 18:59:35,559 | INFO     | did not find any defunct processes belonging to 26267
[2025-06-04 14:59:45] 2025-06-04 18:59:35,559 | INFO     | ready for new job
[2025-06-04 14:59:45] 2025-06-04 18:59:35,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:59:45] 2025-06-04 18:59:35,560 | INFO     | **************************************
[2025-06-04 14:59:45] 2025-06-04 18:59:35,560 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:59:45] 2025-06-04 18:59:35,560 | INFO     | **************************************
[2025-06-04 14:59:45] 2025-06-04 18:59:35,561 | INFO     | 
[2025-06-04 14:59:45] 2025-06-04 18:59:35,561 | INFO     | architecture information:
[2025-06-04 14:59:45] 2025-06-04 18:59:35,562 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:59:45] 2025-06-04 18:59:35,575 | INFO     | cat /etc/os-release:
[2025-06-04 14:59:45] NAME="CentOS Linux"
[2025-06-04 14:59:45] VERSION="7 (Core)"
[2025-06-04 14:59:45] ID="centos"
[2025-06-04 14:59:45] ID_LIKE="rhel fedora"
[2025-06-04 14:59:45] VERSION_ID="7"
[2025-06-04 14:59:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:59:45] ANSI_COLOR="0;31"
[2025-06-04 14:59:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:59:45] HOME_URL="https://www.centos.org/"
[2025-06-04 14:59:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:59:45] 
[2025-06-04 14:59:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:59:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:59:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:59:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:59:45] 
[2025-06-04 14:59:45] 2025-06-04 18:59:35,575 | INFO     | **************************************
[2025-06-04 14:59:45] 2025-06-04 18:59:36,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:59:45] 2025-06-04 18:59:36,094 | INFO     | sufficient remaining disk space (29379002368 B)
[2025-06-04 14:59:45] 2025-06-04 18:59:36,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:59:45] 2025-06-04 18:59:36,095 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:59:45] 2025-06-04 18:59:36,095 | INFO     | update_server=False
[2025-06-04 14:59:45] 2025-06-04 18:59:36,095 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:59:45] 2025-06-04 18:59:36,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:59:45] 2025-06-04 18:59:36,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:59:45] 2025-06-04 18:59:36,259 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 14:59:45] 2025-06-04 18:59:36,260 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 14:59:45] 2025-06-04 18:59:36,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:59:45] 2025-06-04 18:59:36,260 | INFO     | will abort loop
[2025-06-04 14:59:45] 2025-06-04 18:59:36,695 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:59:45] 2025-06-04 18:59:36,696 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:59:45] 2025-06-04 18:59:36,696 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:59:45] 2025-06-04 18:59:36,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:59:45] 2025-06-04 18:59:36,777 | INFO     | all job control threads have been joined
[2025-06-04 14:59:45] 2025-06-04 18:59:36,876 | INFO     | all payload control threads have been joined
[2025-06-04 14:59:45] 2025-06-04 18:59:36,975 | INFO     | all data control threads have been joined
[2025-06-04 14:59:45] 2025-06-04 18:59:37,100 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,101 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,265 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,319 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,406 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,503 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,778 | INFO     | [job] control thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,855 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,879 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,881 | INFO     | [payload] control thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:37,980 | INFO     | [data] control thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:38,532 | INFO     | [job] validate thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:38,650 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:38,704 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:40,101 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:59:45] 2025-06-04 18:59:40,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697718318912)>', '<ExcThread(monitor, started 140697281750784)>']
[2025-06-04 14:59:45] 2025-06-04 18:59:40,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:59:45] 2025-06-04 18:59:40,714 | INFO     | [monitor] control thread has ended
[2025-06-04 14:59:45] 2025-06-04 18:59:45,300 | INFO     | all workflow threads have been joined
[2025-06-04 14:59:45] 2025-06-04 18:59:45,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:59:45] 2025-06-04 18:59:45,300 | INFO     | traces error code: 0
[2025-06-04 14:59:45] 2025-06-04 18:59:45,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:59:45] 2025-06-04 18:59:45,398 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:59:45] 2025-06-04 18:59:45,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:59:45] 2025-06-04 18:59:45,406 [wrapper] pilotpid: 19859
[2025-06-04 14:59:45] 2025-06-04 18:59:45,409 [wrapper] Pilot exit status: 0
[2025-06-04 14:59:45] 2025-06-04 18:59:45,424 [wrapper] pandaids: 6668439244
[2025-06-04 14:59:45] 2025-06-04 18:59:45,462 [wrapper] cleanup supervisor_pilot 15556 19860
[2025-06-04 14:59:45] 2025-06-04 18:59:45,465 [wrapper] Test setup, not cleaning
[2025-06-04 14:59:45] 2025-06-04 18:59:45,469 [wrapper] apfmon messages muted
[2025-06-04 14:59:45] 2025-06-04 18:59:45,473 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:59:45] 2025-06-04 18:59:45,476 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:59:45]  *** Error codes and diagnostics ***
[2025-06-04 14:59:45]     "exeErrorCode": 0,
[2025-06-04 14:59:45]     "exeErrorDiag": "",
[2025-06-04 14:59:45]     "pilotErrorCode": 0,
[2025-06-04 14:59:45]     "pilotErrorDiag": "",
[2025-06-04 14:59:45]  *** Listing of results directory ***
[2025-06-04 14:59:45] total 417896
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas    495897 May 28 07:30 pilot3.tar.gz
[2025-06-04 14:59:45] -rwx------ 1 boincer umatlas     37140 May 28 07:32 runpilot2-wrapper.sh
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas      5111 May 28 07:32 queuedata.json
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 13:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:59:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 13:26 run_atlas
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 13:26 job.xml
[2025-06-04 14:59:45] -rw-r--r-- 2 boincer umatlas 224042566 Jun  4 13:26 EVNT.44871834._003260.pool.root.1
[2025-06-04 14:59:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 14:59:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 13:26 shared
[2025-06-04 14:59:45] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 13:26 input.tar.gz
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 13:26 boinc_lockfile
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 13:26 pandaJob.out
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas    990984 Jun  4 13:26 agis_schedconf.cvmfs.json
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas   1598969 Jun  4 13:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:59:45] drwx------ 4 boincer umatlas      4096 Jun  4 13:26 pilot3
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 14:54 init_data.xml
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas 198239380 Jun  4 14:58 HITS.44871837._083580.pool.root.1
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 14:59 boinc_task_state.xml
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas      1046 Jun  4 14:59 memory_monitor_summary.json
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas    376957 Jun  4 14:59 log.44871837._083580.job.log.tgz.1
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas      7751 Jun  4 14:59 heartbeat.json
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 14:59 boinc_mmap_file
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 14:59 wrapper_checkpoint.txt
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas        95 Jun  4 14:59 pilot_heartbeat.json
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas      4539 Jun  4 14:59 pilotlog.txt
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas    525494 Jun  4 14:59 log.44871837._083580.job.log.1
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas       357 Jun  4 14:59 output.list
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 14:59 runtime_log
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas    921600 Jun  4 14:59 result.tar.gz
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 14:59 runtime_log.err
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas       659 Jun  4 14:59 mhVNDm8BUe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEQTKDmsDShWo.diag
[2025-06-04 14:59:45] -rw-r--r-- 1 boincer umatlas     21347 Jun  4 14:59 stderr.txt
[2025-06-04 14:59:45] HITS file was successfully produced:
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas 198239380 Jun  4 14:58 shared/HITS.pool.root.1
[2025-06-04 14:59:45]  *** Contents of shared directory: ***
[2025-06-04 14:59:45] total 413812
[2025-06-04 14:59:45] -rw-r--r-- 2 boincer umatlas 224042566 Jun  4 13:26 ATLAS.root_0
[2025-06-04 14:59:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 13:26 start_atlas.sh
[2025-06-04 14:59:45] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 13:26 input.tar.gz
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas 198239380 Jun  4 14:58 HITS.pool.root.1
[2025-06-04 14:59:45] -rw------- 1 boincer umatlas    921600 Jun  4 14:59 result.tar.gz
14:59:46 (15763): run_atlas exited; CPU time 60045.070181
14:59:46 (15763): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN