Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:21:43 (1691410): wrapper (7.7.26015): starting
13:21:43 (1691410): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 13:21:43] Arguments: --nthreads 12
[2025-06-04 13:21:43] Threads: 12
[2025-06-04 13:21:43] Checking for CVMFS
[2025-06-04 13:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:21:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:21:44] 2.12.6.0 1448327 23564 397784 146789 0 14 38889764 40960000 3565 16776704 0 112849141 99.744 82146727 34453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 13:21:44] CVMFS is ok
[2025-06-04 13:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:21:44] Further information can be found at the LHC@home message board.
[2025-06-04 13:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:21:44] Checking for apptainer binary...
[2025-06-04 13:21:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:21:44] Running /usr/bin/apptainer --version
[2025-06-04 13:21:44] apptainer version 1.4.1-1.el9
[2025-06-04 13:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:21:44] c6-5-37-3.aglt2.org
[2025-06-04 13:21:44] apptainer works
[2025-06-04 13:21:44] Set ATHENA_PROC_NUMBER=12
[2025-06-04 13:21:44] Set ATHENA_CORE_NUMBER=12
[2025-06-04 13:21:44] Starting ATLAS job with PandaID=6679904698
[2025-06-04 13:21:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:53:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:53:17]  lfn=log.45006595._056841.job.log.tgz.1
[2025-06-04 13:53:17]  mtime=0
[2025-06-04 13:53:17]  protocol_id=None
[2025-06-04 13:53:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:53:17]  replicas=None
[2025-06-04 13:53:17]  scope=mc23_13p6TeV
[2025-06-04 13:53:17]  status=None
[2025-06-04 13:53:17]  status_code=0
[2025-06-04 13:53:17]  storage_token=
[2025-06-04 13:53:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679904698/log.45006595._056841.job.log.tgz.1
[2025-06-04 13:53:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/d9/log.45006595._056841.job.log.tgz.1
[2025-06-04 13:53:17]  workdir=None
[2025-06-04 13:53:17] ]
[2025-06-04 13:53:17] 2025-06-04 17:52:51,750 | INFO     | transferring file log.45006595._056841.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679904698/log.45006595._056841.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:53:17] 2025-06-04 17:52:51,750 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679904698/log.45006595._056841.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056841.job
[2025-06-04 13:53:17] 2025-06-04 17:52:51,761 | INFO     | adding to output.list: log.45006595._056841.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/d9/log.45006595._056841.job.log.tg
[2025-06-04 13:53:17] 2025-06-04 17:52:51,761 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:53:17] 2025-06-04 17:52:51,761 | INFO     | summary of transferred files:
[2025-06-04 13:53:17] 2025-06-04 17:52:51,762 | INFO     |  -- lfn=log.45006595._056841.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:53:17] 2025-06-04 17:52:51,762 | INFO     | stage-out finished correctly
[2025-06-04 13:53:17] 2025-06-04 17:52:51,974 | INFO     | monitor loop #145: job 0:6679904698 is in state 'finished'
[2025-06-04 13:53:17] 2025-06-04 17:52:51,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:53:17] 2025-06-04 17:52:52,541 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:53:17] 2025-06-04 17:52:54,477 | INFO     | monitor loop #146: job 0:6679904698 is in state 'finished'
[2025-06-04 13:53:17] 2025-06-04 17:52:54,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:53:17] 2025-06-04 17:52:55,411 | INFO     | job 6679904698 has state=finished
[2025-06-04 13:53:17] 2025-06-04 17:52:55,412 | INFO     | preparing for final server update for job 6679904698 in state='finished'
[2025-06-04 13:53:17] 2025-06-04 17:52:55,412 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:53:17] 2025-06-04 17:52:55,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:53:17] 2025-06-04 17:52:55,412 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:53:17] 2025-06-04 17:52:55,412 | INFO     | job 6679904698 has finished - writing final server update
[2025-06-04 13:53:17] 2025-06-04 17:52:55,412 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:53:17] 2025-06-04 17:52:55,426 | INFO     | executing command: lscpu
[2025-06-04 13:53:17] 2025-06-04 17:52:55,459 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:53:17] 2025-06-04 17:52:56,979 | INFO     | monitor loop #147: job 0:6679904698 is in state 'finished'
[2025-06-04 13:53:17] 2025-06-04 17:52:56,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:53:17] 2025-06-04 17:52:57,612 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:53:17] 2025-06-04 17:52:57,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679904698/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:53:17] 2025-06-04 17:52:57,613 | INFO     | extracted standard info from prmon json
[2025-06-04 13:53:17] 2025-06-04 17:52:57,613 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:53:17] 2025-06-04 17:52:57,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:53:17] 2025-06-04 17:52:57,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:53:17] 2025-06-04 17:52:57,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:53:17] 2025-06-04 17:52:57,614 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:53:17] 2025-06-04 17:52:57,614 | INFO     | sum of square deviations: 4279150.0
[2025-06-04 13:53:17] 2025-06-04 17:52:57,614 | INFO     | sum of deviations: 123992473.49999999
[2025-06-04 13:53:17] 2025-06-04 17:52:57,614 | INFO     | mean x: 1749058736.5
[2025-06-04 13:53:17] 2025-06-04 17:52:57,614 | INFO     | mean y: 2822370.4583333335
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | -- intersect: -50677831272.30243
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | intersect: -50677831272.30243
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | chi2: 0.0006944265171813461
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | -- intersect: -50677831272.30243
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | current memory leak: 28.98 B/s (using 24 data points, chi2=0.00)
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | ..............................
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . Timing measurements:
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . get job = 0 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . initial setup = 2 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . payload setup = 3 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . stage-in = 0 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . payload execution = 1839 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . stage-out = 0 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | . log creation = 0 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,615 | INFO     | ..............................
[2025-06-04 13:53:17] 2025-06-04 17:52:57,660 | INFO     | 
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | job summary report
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | --------------------------------------------------
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | PanDA job id: 6679904698
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | task id: 45006595
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | errors: (none)
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | pilot state: finished 
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | transexitcode: 0
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | exeerrorcode: 0
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | exeerrordiag: 
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | exitcode: 0
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | exitmsg: OK
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | cpuconsumptiontime: 19164 s
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | nevents: 400
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | neventsw: 0
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | pid: 1701523
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | pgrp: 1701523
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | corecount: 12
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | event service: False
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | sizes: {0: 2397289, 2: 2397495, 11: 2397523, 1846: 2422355, 1848: 2431296, 1849: 2431352, 1854: 2431650}
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | --------------------------------------------------
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | 
[2025-06-04 13:53:17] 2025-06-04 17:52:57,661 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:53:17] 2025-06-04 17:52:57,672 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | job 6679904698 has completed (purged errors)
[2025-06-04 13:53:17] 2025-06-04 17:52:57,673 | INFO     | overall cleanup function is called
[2025-06-04 13:53:17] 2025-06-04 17:52:58,680 | INFO     | --- collectZombieJob: --- 10, [1701523]
[2025-06-04 13:53:17] 2025-06-04 17:52:58,680 | INFO     | zombie collector waiting for pid 1701523
[2025-06-04 13:53:17] 2025-06-04 17:52:58,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:53:17] 2025-06-04 17:52:58,680 | INFO     | collected zombie processes
[2025-06-04 13:53:17] 2025-06-04 17:52:58,680 | INFO     | will attempt to kill all subprocesses of pid=1701523
[2025-06-04 13:53:17] 2025-06-04 17:52:58,805 | INFO     | process IDs to be killed: [1701523] (in reverse order)
[2025-06-04 13:53:17] 2025-06-04 17:52:58,851 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:53:17] 2025-06-04 17:52:58,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:53:17] 2025-06-04 17:52:58,857 | INFO     | did not find any defunct processes belonging to 1701523
[2025-06-04 13:53:17] 2025-06-04 17:52:58,861 | INFO     | did not find any defunct processes belonging to 1701523
[2025-06-04 13:53:17] 2025-06-04 17:52:58,861 | INFO     | ready for new job
[2025-06-04 13:53:17] 2025-06-04 17:52:58,861 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:53:17] 2025-06-04 17:52:58,862 | INFO     | **************************************
[2025-06-04 13:53:17] 2025-06-04 17:52:58,862 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:53:17] 2025-06-04 17:52:58,862 | INFO     | **************************************
[2025-06-04 13:53:17] 2025-06-04 17:52:58,862 | INFO     | 
[2025-06-04 13:53:17] 2025-06-04 17:52:58,876 | INFO     | architecture information:
[2025-06-04 13:53:17] 2025-06-04 17:52:58,876 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:53:17] 2025-06-04 17:52:58,884 | INFO     | cat /etc/os-release:
[2025-06-04 13:53:17] NAME="CentOS Linux"
[2025-06-04 13:53:17] VERSION="7 (Core)"
[2025-06-04 13:53:17] ID="centos"
[2025-06-04 13:53:17] ID_LIKE="rhel fedora"
[2025-06-04 13:53:17] VERSION_ID="7"
[2025-06-04 13:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:53:17] ANSI_COLOR="0;31"
[2025-06-04 13:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:53:17] HOME_URL="https://www.centos.org/"
[2025-06-04 13:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:53:17] 
[2025-06-04 13:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:53:17] 
[2025-06-04 13:53:17] 2025-06-04 17:52:58,884 | INFO     | **************************************
[2025-06-04 13:53:17] 2025-06-04 17:52:59,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | INFO     | sufficient remaining disk space (75554095104 B)
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | INFO     | update_server=False
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:53:17] 2025-06-04 17:52:59,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:53:17] 2025-06-04 17:52:59,482 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:53:17] 2025-06-04 17:52:59,483 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:53:17] 2025-06-04 17:52:59,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:53:17] 2025-06-04 17:52:59,483 | INFO     | will abort loop
[2025-06-04 13:53:17] 2025-06-04 17:52:59,816 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:53:17] 2025-06-04 17:53:00,046 | INFO     | all data control threads have been joined
[2025-06-04 13:53:17] 2025-06-04 17:53:00,401 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:00,402 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:00,475 | INFO     | all payload control threads have been joined
[2025-06-04 13:53:17] 2025-06-04 17:53:00,488 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:00,520 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:00,582 | INFO     | PID=1695040 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:53:17] 2025-06-04 17:53:00,583 | INFO     | .. there are 7 such processes running
[2025-06-04 13:53:17] 2025-06-04 17:53:00,583 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:53:17] 2025-06-04 17:53:00,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:53:17] 2025-06-04 17:53:00,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:53:17] 2025-06-04 17:53:00,602 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,051 | INFO     | [data] control thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,057 | INFO     | all job control threads have been joined
[2025-06-04 13:53:17] 2025-06-04 17:53:01,077 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,192 | INFO     | [job] validate thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,286 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,376 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,469 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,480 | INFO     | [payload] control thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:01,821 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:02,063 | INFO     | [job] control thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:03,402 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:10,403 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:53:17] 2025-06-04 17:53:11,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:53:17] 2025-06-04 17:53:12,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816912103232)>', '<ExcThread(monitor, started 139816150759168)>']
[2025-06-04 13:53:17] 2025-06-04 17:53:12,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:53:17] 2025-06-04 17:53:12,640 | INFO     | [monitor] control thread has ended
[2025-06-04 13:53:17] 2025-06-04 17:53:17,366 | INFO     | all workflow threads have been joined
[2025-06-04 13:53:17] 2025-06-04 17:53:17,366 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:53:17] 2025-06-04 17:53:17,367 | INFO     | traces error code: 0
[2025-06-04 13:53:17] 2025-06-04 17:53:17,367 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:53:17] 2025-06-04 17:53:17,445 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:53:17] 2025-06-04 17:53:17,447 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:53:17] 2025-06-04 17:53:17,448 [wrapper] pilotpid: 1695040
[2025-06-04 13:53:17] 2025-06-04 17:53:17,450 [wrapper] Pilot exit status: 0
[2025-06-04 13:53:17] 2025-06-04 17:53:17,456 [wrapper] pandaids: 6679904698
[2025-06-04 13:53:17] 2025-06-04 17:53:17,487 [wrapper] cleanup supervisor_pilot 1754537 1695041
[2025-06-04 13:53:17] 2025-06-04 17:53:17,489 [wrapper] Test setup, not cleaning
[2025-06-04 13:53:17] 2025-06-04 17:53:17,490 [wrapper] apfmon messages muted
[2025-06-04 13:53:17] 2025-06-04 17:53:17,492 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:53:17] 2025-06-04 17:53:17,493 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:53:17]  *** Error codes and diagnostics ***
[2025-06-04 13:53:17]     "exeErrorCode": 0,
[2025-06-04 13:53:17]     "exeErrorDiag": "",
[2025-06-04 13:53:17]     "pilotErrorCode": 0,
[2025-06-04 13:53:17]     "pilotErrorDiag": "",
[2025-06-04 13:53:17]  *** Listing of results directory ***
[2025-06-04 13:53:17] total 388040
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 12:57 pilot3.tar.gz
[2025-06-04 13:53:17] -rwx------. 1 boincer umatlas     37140 Jun  4 13:21 runpilot2-wrapper.sh
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 13:21 queuedata.json
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas       100 Jun  4 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:53:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 13:21 run_atlas
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas       105 Jun  4 13:21 job.xml
[2025-06-04 13:53:17] -rw-r--r--. 2 boincer umatlas 216080076 Jun  4 13:21 EVNT.45006593._000918.pool.root.1
[2025-06-04 13:53:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:21 start_atlas.sh
[2025-06-04 13:53:17] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 13:21 shared
[2025-06-04 13:53:17] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 13:21 input.tar.gz
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas         0 Jun  4 13:21 boinc_lockfile
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas      2523 Jun  4 13:21 pandaJob.out
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas    990984 Jun  4 13:21 agis_schedconf.cvmfs.json
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:53:17] drwx------. 4 boincer umatlas      4096 Jun  4 13:21 pilot3
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 13:45 init_data.xml
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas        95 Jun  4 13:52 pilot_heartbeat.json
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas 176300284 Jun  4 13:52 HITS.45006595._056841.pool.root.1
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas       529 Jun  4 13:52 boinc_task_state.xml
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas      1026 Jun  4 13:52 memory_monitor_summary.json
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas    349114 Jun  4 13:52 log.45006595._056841.job.log.tgz.1
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas      7701 Jun  4 13:52 heartbeat.json
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:53 boinc_mmap_file
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas        27 Jun  4 13:53 wrapper_checkpoint.txt
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas      5005 Jun  4 13:53 pilotlog.txt
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas    219911 Jun  4 13:53 log.45006595._056841.job.log.1
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas       357 Jun  4 13:53 output.list
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:53 runtime_log
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas    583680 Jun  4 13:53 result.tar.gz
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 13:53 runtime_log.err
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas       650 Jun  4 13:53 0SNLDmpy6g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmi1nKDmi8EPpn.diag
[2025-06-04 13:53:17] -rw-r--r--. 1 boincer umatlas     21626 Jun  4 13:53 stderr.txt
[2025-06-04 13:53:17] HITS file was successfully produced:
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas 176300284 Jun  4 13:52 shared/HITS.pool.root.1
[2025-06-04 13:53:17]  *** Contents of shared directory: ***
[2025-06-04 13:53:17] total 384284
[2025-06-04 13:53:17] -rw-r--r--. 2 boincer umatlas 216080076 Jun  4 13:21 ATLAS.root_0
[2025-06-04 13:53:17] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:21 start_atlas.sh
[2025-06-04 13:53:17] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 13:21 input.tar.gz
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas 176300284 Jun  4 13:52 HITS.pool.root.1
[2025-06-04 13:53:17] -rw-------. 1 boincer umatlas    583680 Jun  4 13:53 result.tar.gz
13:53:19 (1691410): run_atlas exited; CPU time 19177.156404
13:53:19 (1691410): called boinc_finish(0)

</stderr_txt>
]]>

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