Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:21:02 (733709): wrapper (7.7.26015): starting
13:21:02 (733709): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:21:02] Arguments: --nthreads 8
[2025-06-04 13:21:02] Threads: 8
[2025-06-04 13:21:02] Checking for CVMFS
[2025-06-04 13:21:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:21:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:21:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:21:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:21:03] 2.12.6.0 5697 1632 216708 146789 2 85 24732854 32935937 29998 16776704 0 21453208 99.675 16107564 23581 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 13:21:03] CVMFS is ok
[2025-06-04 13:21:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:21:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:21:03] Further information can be found at the LHC@home message board.
[2025-06-04 13:21:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:21:03] Checking for apptainer binary...
[2025-06-04 13:21:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:21:03] Running /usr/bin/apptainer --version
[2025-06-04 13:21:04] apptainer version 1.4.1-1.el9
[2025-06-04 13:21:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:21:04] c7-3-17.aglt2.org
[2025-06-04 13:21:04] apptainer works
[2025-06-04 13:21:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:21:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:21:04] Starting ATLAS job with PandaID=6667579990
[2025-06-04 13:21:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:42:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:42:41] 2025-06-04 19:42:20,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:42:41] 2025-06-04 19:42:22,950 | INFO     | monitor loop #597: job 0:6667579990 is in state 'finished'
[2025-06-04 15:42:41] 2025-06-04 19:42:22,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,132 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:42:41] 2025-06-04 19:42:23,133 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667579990/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,134 | INFO     | extracted standard info from prmon json
[2025-06-04 15:42:41] 2025-06-04 19:42:23,134 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:42:41] 2025-06-04 19:42:23,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:42:41] 2025-06-04 19:42:23,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:42:41] 2025-06-04 19:42:23,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:42:41] 2025-06-04 19:42:23,137 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:42:41] 2025-06-04 19:42:23,137 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,137 | INFO     | sum of deviations: -6449324795.99999
[2025-06-04 15:42:41] 2025-06-04 19:42:23,138 | INFO     | mean x: 1749061942.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,138 | INFO     | mean y: 2298960.2116788323
[2025-06-04 15:42:41] 2025-06-04 19:42:23,138 | INFO     | -- intersect: 14150540099.872753
[2025-06-04 15:42:41] 2025-06-04 19:42:23,138 | INFO     | intersect: 14150540099.872753
[2025-06-04 15:42:41] 2025-06-04 19:42:23,138 | INFO     | chi2: 2.382227534149843
[2025-06-04 15:42:41] 2025-06-04 19:42:23,138 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | sum of deviations: -5319218482.999996
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | mean x: 1749061789.5
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | mean y: 2300991.9242424243
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | -- intersect: 13048310460.207819
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | intersect: 13048310460.207819
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | chi2: 2.3837782905337934
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | current chi2=2.3837782905337934 (change=-0.06509690454501234 %)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,139 | INFO     | right removable region: 131
[2025-06-04 15:42:41] 2025-06-04 19:42:23,140 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,140 | INFO     | sum of deviations: -30894606316.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,140 | INFO     | mean x: 1749062094.5
[2025-06-04 15:42:41] 2025-06-04 19:42:23,140 | INFO     | mean y: 2342669.8484848486
[2025-06-04 15:42:41] 2025-06-04 19:42:23,140 | INFO     | -- intersect: 75775014555.64038
[2025-06-04 15:42:41] 2025-06-04 19:42:23,140 | INFO     | intersect: 75775014555.64038
[2025-06-04 15:42:41] 2025-06-04 19:42:23,141 | INFO     | chi2: 0.29035727669681116
[2025-06-04 15:42:41] 2025-06-04 19:42:23,141 | INFO     | current chi2=0.29035727669681116 (change=87.81152209289561 %)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,141 | INFO     | sum of square deviations: 635130048.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,141 | INFO     | sum of deviations: -28925228269.999996
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | mean x: 1749062247.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | mean y: 2338711.472440945
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | -- intersect: 79658505054.45439
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | intersect: 79658505054.45439
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | chi2: 0.26118341997311034
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | current chi2=0.26118341997311034 (change=10.047572099997321 %)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | left removable region: 20
[2025-06-04 15:42:41] 2025-06-04 19:42:23,142 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | sum of deviations: -18515643357.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | mean x: 1749062369.0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | mean y: 2322679.054054054
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | -- intersect: 76373940818.86145
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | intersect: 76373940818.86145
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | chi2: 0.24327736862888913
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | -- intersect: 76373940818.86145
[2025-06-04 15:42:41] 2025-06-04 19:42:23,143 | INFO     | current memory leak: -43.66 B/s (using 111 data points, chi2=0.24)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | ..............................
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . Timing measurements:
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . get job = 0 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . initial setup = 6 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . payload setup = 30 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . stage-in = 0 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . payload execution = 8352 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . stage-out = 0 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | . log creation = 0 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,144 | INFO     | ..............................
[2025-06-04 15:42:41] 2025-06-04 19:42:23,211 | INFO     | 
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | job summary report
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | --------------------------------------------------
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | PanDA job id: 6667579990
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | task id: 44871837
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | errors: (none)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | pilot state: finished 
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | transexitcode: 0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | exeerrorcode: 0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | exeerrordiag: 
[2025-06-04 15:42:41] 2025-06-04 19:42:23,212 | INFO     | exitcode: 0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | exitmsg: OK
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | cpuconsumptiontime: 37369 s
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | nevents: 400
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | neventsw: 0
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | pid: 747248
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | pgrp: 747248
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | corecount: 8
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | event service: False
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | sizes: {0: 2397164, 1: 2397419, 2: 2397419, 12: 2397447, 19: 2397681, 23: 2397709, 8386: 2425525, 8387: 2434521, 8388: 2434521, 8392: 2434691}
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | --------------------------------------------------
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | 
[2025-06-04 15:42:41] 2025-06-04 19:42:23,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 15:42:41] 2025-06-04 19:42:23,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | job 6667579990 has completed (purged errors)
[2025-06-04 15:42:41] 2025-06-04 19:42:23,239 | INFO     | overall cleanup function is called
[2025-06-04 15:42:41] 2025-06-04 19:42:24,246 | INFO     | --- collectZombieJob: --- 10, [747248]
[2025-06-04 15:42:41] 2025-06-04 19:42:24,246 | INFO     | zombie collector waiting for pid 747248
[2025-06-04 15:42:41] 2025-06-04 19:42:24,247 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:42:41] 2025-06-04 19:42:24,247 | INFO     | collected zombie processes
[2025-06-04 15:42:41] 2025-06-04 19:42:24,247 | INFO     | will attempt to kill all subprocesses of pid=747248
[2025-06-04 15:42:41] 2025-06-04 19:42:24,704 | INFO     | process IDs to be killed: [747248] (in reverse order)
[2025-06-04 15:42:41] 2025-06-04 19:42:24,813 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:42:41] 2025-06-04 19:42:24,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:42:41] 2025-06-04 19:42:24,828 | INFO     | did not find any defunct processes belonging to 747248
[2025-06-04 15:42:41] 2025-06-04 19:42:24,842 | INFO     | did not find any defunct processes belonging to 747248
[2025-06-04 15:42:41] 2025-06-04 19:42:24,842 | INFO     | ready for new job
[2025-06-04 15:42:41] 2025-06-04 19:42:24,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:42:41] 2025-06-04 19:42:24,845 | INFO     | **************************************
[2025-06-04 15:42:41] 2025-06-04 19:42:24,845 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:42:41] 2025-06-04 19:42:24,845 | INFO     | **************************************
[2025-06-04 15:42:41] 2025-06-04 19:42:24,845 | INFO     | 
[2025-06-04 15:42:41] 2025-06-04 19:42:24,864 | INFO     | architecture information:
[2025-06-04 15:42:41] 2025-06-04 19:42:24,864 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:42:41] 2025-06-04 19:42:24,878 | INFO     | cat /etc/os-release:
[2025-06-04 15:42:41] NAME="CentOS Linux"
[2025-06-04 15:42:41] VERSION="7 (Core)"
[2025-06-04 15:42:41] ID="centos"
[2025-06-04 15:42:41] ID_LIKE="rhel fedora"
[2025-06-04 15:42:41] VERSION_ID="7"
[2025-06-04 15:42:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:42:41] ANSI_COLOR="0;31"
[2025-06-04 15:42:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:42:41] HOME_URL="https://www.centos.org/"
[2025-06-04 15:42:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:42:41] 
[2025-06-04 15:42:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:42:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:42:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:42:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:42:41] 
[2025-06-04 15:42:41] 2025-06-04 19:42:24,879 | INFO     | **************************************
[2025-06-04 15:42:41] 2025-06-04 19:42:25,382 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 15:42:41] 2025-06-04 19:42:25,399 | INFO     | sufficient remaining disk space (76143394816 B)
[2025-06-04 15:42:41] 2025-06-04 19:42:25,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:42:41] 2025-06-04 19:42:25,400 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:42:41] 2025-06-04 19:42:25,400 | INFO     | update_server=False
[2025-06-04 15:42:41] 2025-06-04 19:42:25,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:42:41] 2025-06-04 19:42:25,400 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:42:41] 2025-06-04 19:42:25,454 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 15:42:41] 2025-06-04 19:42:25,454 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 15:42:41] 2025-06-04 19:42:25,454 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:42:41] 2025-06-04 19:42:25,455 | INFO     | will abort loop
[2025-06-04 15:42:41] 2025-06-04 19:42:26,190 | INFO     | all data control threads have been joined
[2025-06-04 15:42:41] 2025-06-04 19:42:26,301 | INFO     | all payload control threads have been joined
[2025-06-04 15:42:41] 2025-06-04 19:42:26,385 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:42:41] 2025-06-04 19:42:26,404 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:26,460 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:26,614 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:26,634 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:26,723 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:26,803 | INFO     | all job control threads have been joined
[2025-06-04 15:42:41] 2025-06-04 19:42:26,854 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:26,949 | INFO     | PID=737423 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 15:42:41] 2025-06-04 19:42:26,949 | INFO     | .. there are 42 such processes running
[2025-06-04 15:42:41] 2025-06-04 19:42:26,949 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:42:41] 2025-06-04 19:42:26,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:42:41] 2025-06-04 19:42:26,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:42:41] 2025-06-04 19:42:27,196 | INFO     | [data] control thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:27,216 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:27,308 | INFO     | [payload] control thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:27,460 | INFO     | [job] validate thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:27,538 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:27,809 | INFO     | [job] control thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:28,220 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:42:41] 2025-06-04 19:42:28,390 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:29,224 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:29,407 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:35,512 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:42:41] 2025-06-04 19:42:36,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:42:41] 2025-06-04 19:42:36,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000357771072)>', '<ExcThread(monitor, started 140000012261120)>']
[2025-06-04 15:42:41] 2025-06-04 19:42:36,998 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:42:41] 2025-06-04 19:42:36,998 | INFO     | [monitor] control thread has ended
[2025-06-04 15:42:41] 2025-06-04 19:42:41,597 | INFO     | all workflow threads have been joined
[2025-06-04 15:42:41] 2025-06-04 19:42:41,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:42:41] 2025-06-04 19:42:41,597 | INFO     | traces error code: 0
[2025-06-04 15:42:41] 2025-06-04 19:42:41,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:42:41] 2025-06-04 19:42:41,722 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:42:41] 2025-06-04 19:42:41,724 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:42:41] 2025-06-04 19:42:41,727 [wrapper] pilotpid: 737423
[2025-06-04 15:42:41] 2025-06-04 19:42:41,730 [wrapper] Pilot exit status: 0
[2025-06-04 15:42:41] 2025-06-04 19:42:41,739 [wrapper] pandaids: 6667579990
[2025-06-04 15:42:41] 2025-06-04 19:42:41,821 [wrapper] cleanup supervisor_pilot 1455294 737424
[2025-06-04 15:42:41] 2025-06-04 19:42:41,824 [wrapper] Test setup, not cleaning
[2025-06-04 15:42:41] 2025-06-04 19:42:41,827 [wrapper] apfmon messages muted
[2025-06-04 15:42:41] 2025-06-04 19:42:41,829 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:42:41] 2025-06-04 19:42:41,831 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:42:41]  *** Error codes and diagnostics ***
[2025-06-04 15:42:41]     "exeErrorCode": 0,
[2025-06-04 15:42:41]     "exeErrorDiag": "",
[2025-06-04 15:42:41]     "pilotErrorCode": 0,
[2025-06-04 15:42:41]     "pilotErrorDiag": "",
[2025-06-04 15:42:41]  *** Listing of results directory ***
[2025-06-04 15:42:41] total 415376
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas    495897 May 27 15:34 pilot3.tar.gz
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas      5111 May 27 16:26 queuedata.json
[2025-06-04 15:42:41] -rwx------. 1 boincer umatlas     37140 May 27 16:27 runpilot2-wrapper.sh
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas       100 Jun  4 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:42:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 13:21 run_atlas
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas       105 Jun  4 13:21 job.xml
[2025-06-04 15:42:41] -rw-r--r--. 2 boincer umatlas 222878302 Jun  4 13:21 EVNT.44871834._002865.pool.root.1
[2025-06-04 15:42:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:21 start_atlas.sh
[2025-06-04 15:42:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 13:21 shared
[2025-06-04 15:42:41] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 13:21 input.tar.gz
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas         0 Jun  4 13:21 boinc_lockfile
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 13:21 pandaJob.out
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas    990984 Jun  4 13:21 agis_schedconf.cvmfs.json
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:42:41] drwx------. 4 boincer umatlas      4096 Jun  4 13:21 pilot3
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 15:39 init_data.xml
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas 196394832 Jun  4 15:41 HITS.44871837._073054.pool.root.1
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas       530 Jun  4 15:41 boinc_task_state.xml
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas      1033 Jun  4 15:42 memory_monitor_summary.json
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas    345008 Jun  4 15:42 log.44871837._073054.job.log.tgz.1
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas        95 Jun  4 15:42 pilot_heartbeat.json
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas      7691 Jun  4 15:42 heartbeat.json
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 15:42 boinc_mmap_file
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas        27 Jun  4 15:42 wrapper_checkpoint.txt
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas      5006 Jun  4 15:42 pilotlog.txt
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas    771857 Jun  4 15:42 log.44871837._073054.job.log.1
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas       357 Jun  4 15:42 output.list
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas       620 Jun  4 15:42 runtime_log
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas   1136640 Jun  4 15:42 result.tar.gz
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas       653 Jun  4 15:42 VZmNDmk4Fe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMNSKDmPKYccn.diag
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 15:42 runtime_log.err
[2025-06-04 15:42:41] -rw-r--r--. 1 boincer umatlas     21125 Jun  4 15:42 stderr.txt
[2025-06-04 15:42:41] HITS file was successfully produced:
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas 196394832 Jun  4 15:41 shared/HITS.pool.root.1
[2025-06-04 15:42:41]  *** Contents of shared directory: ***
[2025-06-04 15:42:41] total 411084
[2025-06-04 15:42:41] -rw-r--r--. 2 boincer umatlas 222878302 Jun  4 13:21 ATLAS.root_0
[2025-06-04 15:42:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:21 start_atlas.sh
[2025-06-04 15:42:41] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 13:21 input.tar.gz
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas 196394832 Jun  4 15:41 HITS.pool.root.1
[2025-06-04 15:42:41] -rw-------. 1 boincer umatlas   1136640 Jun  4 15:42 result.tar.gz
15:42:43 (733709): run_atlas exited; CPU time 37666.179564
15:42:43 (733709): called boinc_finish(0)

</stderr_txt>
]]>

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