Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:15:12 (3291): wrapper (7.7.26015): starting
04:15:12 (3291): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:15:12] Arguments: --nthreads 8
[2025-06-05 04:15:12] Threads: 8
[2025-06-05 04:15:12] Checking for CVMFS
[2025-06-05 04:15:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:15:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:15:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:15:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:15:14] 2.11.2.0 13438 34029 89332 146801 1 16 21279788 25165824 3910 130560 0 18843787 99.820 20195700 2230 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 04:15:14] CVMFS is ok
[2025-06-05 04:15:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:15:14] Checking for apptainer binary...
[2025-06-05 04:15:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:15:14] Running /usr/bin/apptainer --version
[2025-06-05 04:15:14] apptainer version 1.3.2-1.el7
[2025-06-05 04:15:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 06:50:11] cg-vwn257.simple-grid.lan
[2025-06-05 06:50:11] apptainer works
[2025-06-05 06:50:11] Set ATHENA_PROC_NUMBER=8
[2025-06-05 06:50:11] Set ATHENA_CORE_NUMBER=8
[2025-06-05 06:50:11] Starting ATLAS job with PandaID=6679893712
[2025-06-05 06:50:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 12:22:23]  *** The last 200 lines of the pilot log: ***
[2025-06-05 12:22:23] 2025-06-05 10:16:37,723 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 12:22:23] 2025-06-05 10:16:37,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 12:22:23] 2025-06-05 10:16:37,724 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 12:22:23] 2025-06-05 10:16:37,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 12:22:23] 2025-06-05 10:16:37,730 | INFO     | fitting pss+swap vs Time
[2025-06-05 12:22:23] 2025-06-05 10:16:37,731 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,734 | INFO     | sum of deviations: 123772301990.99988
[2025-06-05 12:22:23] 2025-06-05 10:16:37,734 | INFO     | mean x: 1749109100.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,734 | INFO     | mean y: 2456228.4660194176
[2025-06-05 12:22:23] 2025-06-05 10:16:37,734 | INFO     | -- intersect: -23661701634.188007
[2025-06-05 12:22:23] 2025-06-05 10:16:37,734 | INFO     | intersect: -23661701634.188007
[2025-06-05 12:22:23] 2025-06-05 10:16:37,735 | INFO     | chi2: 5.966590089417068
[2025-06-05 12:22:23] 2025-06-05 10:16:37,736 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,739 | INFO     | sum of deviations: 142086829385.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,739 | INFO     | mean x: 1749108947.5
[2025-06-05 12:22:23] 2025-06-05 10:16:37,739 | INFO     | mean y: 2462526.736842105
[2025-06-05 12:22:23] 2025-06-05 10:16:37,739 | INFO     | -- intersect: -28525858255.8489
[2025-06-05 12:22:23] 2025-06-05 10:16:37,740 | INFO     | intersect: -28525858255.8489
[2025-06-05 12:22:23] 2025-06-05 10:16:37,740 | INFO     | chi2: 5.22803602221576
[2025-06-05 12:22:23] 2025-06-05 10:16:37,740 | INFO     | current chi2=5.22803602221576 (change=12.37815998976165 %)
[2025-06-05 12:22:23] 2025-06-05 10:16:37,740 | INFO     | right removable region: 303
[2025-06-05 12:22:23] 2025-06-05 10:16:37,741 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,744 | INFO     | sum of deviations: 18278817384.000008
[2025-06-05 12:22:23] 2025-06-05 10:16:37,744 | INFO     | mean x: 1749109252.5
[2025-06-05 12:22:23] 2025-06-05 10:16:37,744 | INFO     | mean y: 2493015.322368421
[2025-06-05 12:22:23] 2025-06-05 10:16:37,744 | INFO     | -- intersect: -3667544939.948709
[2025-06-05 12:22:23] 2025-06-05 10:16:37,745 | INFO     | intersect: -3667544939.948709
[2025-06-05 12:22:23] 2025-06-05 10:16:37,745 | INFO     | chi2: 1.5126753390537697
[2025-06-05 12:22:23] 2025-06-05 10:16:37,745 | INFO     | current chi2=1.5126753390537697 (change=74.6475739679721 %)
[2025-06-05 12:22:23] 2025-06-05 10:16:37,746 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,748 | INFO     | sum of deviations: -16053396901.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,749 | INFO     | mean x: 1749109405.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,749 | INFO     | mean y: 2505314.371237458
[2025-06-05 12:22:23] 2025-06-05 10:16:37,749 | INFO     | -- intersect: 3390141686.693086
[2025-06-05 12:22:23] 2025-06-05 10:16:37,749 | INFO     | intersect: 3390141686.693086
[2025-06-05 12:22:23] 2025-06-05 10:16:37,750 | INFO     | chi2: 0.8241082747021615
[2025-06-05 12:22:23] 2025-06-05 10:16:37,750 | INFO     | current chi2=0.8241082747021615 (change=45.519818203840785 %)
[2025-06-05 12:22:23] 2025-06-05 10:16:37,750 | INFO     | sum of square deviations: 7879803557.5
[2025-06-05 12:22:23] 2025-06-05 10:16:37,753 | INFO     | sum of deviations: -22318611924.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,753 | INFO     | mean x: 1749109557.5
[2025-06-05 12:22:23] 2025-06-05 10:16:37,753 | INFO     | mean y: 2507649.129251701
[2025-06-05 12:22:23] 2025-06-05 10:16:37,753 | INFO     | -- intersect: 4956653668.3210335
[2025-06-05 12:22:23] 2025-06-05 10:16:37,753 | INFO     | intersect: 4956653668.3210335
[2025-06-05 12:22:23] 2025-06-05 10:16:37,754 | INFO     | chi2: 0.7946415200968454
[2025-06-05 12:22:23] 2025-06-05 10:16:37,754 | INFO     | current chi2=0.7946415200968454 (change=3.575592614449309 %)
[2025-06-05 12:22:23] 2025-06-05 10:16:37,754 | INFO     | left removable region: 30
[2025-06-05 12:22:23] 2025-06-05 10:16:37,755 | INFO     | sum of square deviations: 6309000152.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,757 | INFO     | sum of deviations: -5211294843.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,757 | INFO     | mean x: 1749109832.0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,758 | INFO     | mean y: 2516230.5714285714
[2025-06-05 12:22:23] 2025-06-05 10:16:37,758 | INFO     | -- intersect: 1447297785.1340215
[2025-06-05 12:22:23] 2025-06-05 10:16:37,758 | INFO     | intersect: 1447297785.1340215
[2025-06-05 12:22:23] 2025-06-05 10:16:37,758 | INFO     | chi2: 0.006284039003086186
[2025-06-05 12:22:23] 2025-06-05 10:16:37,759 | INFO     | -- intersect: 1447297785.1340215
[2025-06-05 12:22:23] 2025-06-05 10:16:37,759 | INFO     | current memory leak: -0.83 B/s (using 273 data points, chi2=0.01)
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | ..............................
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . Timing measurements:
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . get job = 0 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . initial setup = 3 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . payload setup = 151 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . stage-in = 0 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . payload execution = 18953 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . stage-out = 3 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,760 | INFO     | . log creation = 1 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,761 | INFO     | ..............................
[2025-06-05 12:22:23] 2025-06-05 10:16:37,965 | INFO     | 
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | job summary report
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | --------------------------------------------------
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | PanDA job id: 6679893712
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | task id: 44871837
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | errors: (none)
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 12:22:23] 2025-06-05 10:16:37,983 | INFO     | pilot state: finished 
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | transexitcode: 0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | exeerrorcode: 0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | exeerrordiag: 
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | exitcode: 0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | exitmsg: OK
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | cpuconsumptiontime: 71812 s
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | nevents: 400
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | neventsw: 0
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | pid: 5710
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | pgrp: 5710
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | corecount: 8
[2025-06-05 12:22:23] 2025-06-05 10:16:37,984 | INFO     | event service: False
[2025-06-05 12:22:23] 2025-06-05 10:16:37,985 | INFO     | sizes: {0: 2397170, 1: 2397369, 12: 2397369, 23: 2397397, 34: 2397425, 44: 2397453, 55: 2397609, 66: 2397637, 77: 2397665, 87: 2397721, 98: 2398235, 109: 2398263, 
[2025-06-05 12:22:23] 2025-06-05 10:16:37,985 | INFO     | --------------------------------------------------
[2025-06-05 12:22:23] 2025-06-05 10:16:37,985 | INFO     | 
[2025-06-05 12:22:23] 2025-06-05 10:16:37,985 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 12:22:23] 2025-06-05 10:16:38,073 | INFO     | PID=27533 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 12:22:23] 2025-06-05 10:16:38,073 | INFO     | .. there are 9 such processes running
[2025-06-05 12:22:23] 2025-06-05 10:16:38,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 12:22:23] 2025-06-05 10:16:38,401 | INFO     | job 6679893712 has completed (purged errors)
[2025-06-05 12:22:23] 2025-06-05 10:16:38,401 | INFO     | overall cleanup function is called
[2025-06-05 12:22:23] 2025-06-05 10:16:39,410 | INFO     | --- collectZombieJob: --- 10, [5710]
[2025-06-05 12:22:23] 2025-06-05 10:16:39,410 | INFO     | zombie collector waiting for pid 5710
[2025-06-05 12:22:23] 2025-06-05 10:16:39,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 12:22:23] 2025-06-05 10:16:39,411 | INFO     | collected zombie processes
[2025-06-05 12:22:23] 2025-06-05 10:16:39,411 | INFO     | will attempt to kill all subprocesses of pid=5710
[2025-06-05 12:22:23] 2025-06-05 10:16:39,525 | INFO     | process IDs to be killed: [5710] (in reverse order)
[2025-06-05 12:22:23] 2025-06-05 10:16:40,381 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 12:22:23] 2025-06-05 10:16:40,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 12:22:23] 2025-06-05 10:16:40,385 | INFO     | did not find any defunct processes belonging to 5710
[2025-06-05 12:22:23] 2025-06-05 10:16:40,390 | INFO     | did not find any defunct processes belonging to 5710
[2025-06-05 12:22:23] 2025-06-05 10:16:40,391 | INFO     | ready for new job
[2025-06-05 12:22:23] 2025-06-05 10:16:40,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 12:22:23] 2025-06-05 10:16:40,393 | INFO     | **************************************
[2025-06-05 12:22:23] 2025-06-05 10:16:40,393 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 12:22:23] 2025-06-05 10:16:40,393 | INFO     | **************************************
[2025-06-05 12:22:23] 2025-06-05 10:16:40,394 | INFO     | 
[2025-06-05 12:22:23] 2025-06-05 10:16:40,394 | INFO     | pilot is running in a VM
[2025-06-05 12:22:23] 2025-06-05 10:16:40,394 | INFO     | architecture information:
[2025-06-05 12:22:23] 2025-06-05 10:16:40,399 | INFO     | executing command: cat /etc/os-release
[2025-06-05 12:22:23] 2025-06-05 10:16:40,542 | INFO     | cat /etc/os-release:
[2025-06-05 12:22:23] NAME="CentOS Linux"
[2025-06-05 12:22:23] VERSION="7 (Core)"
[2025-06-05 12:22:23] ID="centos"
[2025-06-05 12:22:23] ID_LIKE="rhel fedora"
[2025-06-05 12:22:23] VERSION_ID="7"
[2025-06-05 12:22:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 12:22:23] ANSI_COLOR="0;31"
[2025-06-05 12:22:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 12:22:23] HOME_URL="https://www.centos.org/"
[2025-06-05 12:22:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 12:22:23] 
[2025-06-05 12:22:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 12:22:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 12:22:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 12:22:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 12:22:23] 
[2025-06-05 12:22:23] 2025-06-05 10:16:40,543 | INFO     | **************************************
[2025-06-05 12:22:23] 2025-06-05 10:16:41,046 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 12:22:23] 2025-06-05 10:16:41,288 | INFO     | sufficient remaining disk space (496785948672 B)
[2025-06-05 12:22:23] 2025-06-05 10:16:41,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 12:22:23] 2025-06-05 10:16:41,289 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 12:22:23] 2025-06-05 10:16:41,289 | INFO     | update_server=False
[2025-06-05 12:22:23] 2025-06-05 10:16:41,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 12:22:23] 2025-06-05 10:16:41,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 12:22:23] 2025-06-05 10:16:41,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:22:23] 2025-06-05 10:16:41,300 | INFO     | aborting loop
[2025-06-05 12:22:23] 2025-06-05 10:16:41,670 | INFO     | all data control threads have been joined
[2025-06-05 12:22:23] 2025-06-05 10:16:41,758 | INFO     | all job control threads have been joined
[2025-06-05 12:22:23] 2025-06-05 10:16:42,087 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 12:22:23] 2025-06-05 10:16:42,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 12:22:23] 2025-06-05 10:16:42,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 12:22:23] 2025-06-05 10:16:42,295 | INFO     | [job] retrieve thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,306 | INFO     | [job] job monitor thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,465 | INFO     | all payload control threads have been joined
[2025-06-05 12:22:23] 2025-06-05 10:16:42,676 | INFO     | [data] control thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,689 | INFO     | [job] validate thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,764 | INFO     | [job] control thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,911 | INFO     | [payload] failed_post thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,919 | INFO     | [data] copytool_in thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,941 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:42,979 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 12:22:23] 2025-06-05 10:16:43,297 | INFO     | [data] copytool_out thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:43,314 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:43,453 | INFO     | [payload] validate_post thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:43,471 | INFO     | [payload] control thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:43,744 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:43,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 12:22:23] 2025-06-05 10:16:43,985 | INFO     | [job] queue monitor thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:47,891 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 12:22:23] 2025-06-05 10:16:48,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474523682624)>', '<ExcThread(monitor, started 140473800840960)>']
[2025-06-05 12:22:23] 2025-06-05 10:16:49,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 12:22:23] 2025-06-05 10:16:49,129 | INFO     | [monitor] control thread has ended
[2025-06-05 12:22:23] 2025-06-05 10:16:53,490 | INFO     | all workflow threads have been joined
[2025-06-05 12:22:23] 2025-06-05 10:16:53,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 12:22:23] 2025-06-05 10:16:53,490 | INFO     | traces error code: 0
[2025-06-05 12:22:23] 2025-06-05 10:16:53,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 12:22:23] 2025-06-05 10:16:53,945 [wrapper] ==== pilot stdout END ====
[2025-06-05 12:22:23] 2025-06-05 10:16:53,993 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 12:22:23] 2025-06-05 10:16:54,068 [wrapper] pilotpid: 27533
[2025-06-05 12:22:23] 2025-06-05 10:16:54,113 [wrapper] Pilot exit status: 0
[2025-06-05 12:22:23] 2025-06-05 10:16:54,569 [wrapper] pandaids: 6679893712
[2025-06-05 12:22:23] 2025-06-05 10:16:55,497 [wrapper] cleanup supervisor_pilot  6984 27534
[2025-06-05 12:22:23] 2025-06-05 10:16:55,611 [wrapper] Test setup, not cleaning
[2025-06-05 12:22:23] 2025-06-05 10:16:55,695 [wrapper] apfmon messages muted
[2025-06-05 12:22:23] 2025-06-05 10:16:55,745 [wrapper] ==== wrapper stdout END ====
[2025-06-05 12:22:23] 2025-06-05 10:16:55,830 [wrapper] ==== wrapper stderr END ====
[2025-06-05 12:22:23]  *** Error codes and diagnostics ***
[2025-06-05 12:22:23]     "exeErrorCode": 0,
[2025-06-05 12:22:23]     "exeErrorDiag": "",
[2025-06-05 12:22:23]     "pilotErrorCode": 0,
[2025-06-05 12:22:23]     "pilotErrorDiag": "",
[2025-06-05 12:22:23]  *** Listing of results directory ***
[2025-06-05 12:22:23] total 425344
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc    495897 Jun  4 18:57 pilot3.tar.gz
[2025-06-05 12:22:23] -rwx------. 1 boinc boinc     37140 Jun  4 19:07 runpilot2-wrapper.sh
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc      5111 Jun  4 19:07 queuedata.json
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc       100 Jun  5 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 12:22:23] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 04:15 run_atlas
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc       105 Jun  5 04:15 job.xml
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc      6389 Jun  5 04:15 init_data.xml
[2025-06-05 12:22:23] -rw-r--r--. 2 boinc boinc 222242810 Jun  5 04:15 EVNT.44871834._002975.pool.root.1
[2025-06-05 12:22:23] -rw-r--r--. 2 boinc boinc     15093 Jun  5 04:15 start_atlas.sh
[2025-06-05 12:22:23] drwxrwx--x. 2 boinc boinc        68 Jun  5 04:15 shared
[2025-06-05 12:22:23] -rw-r--r--. 2 boinc boinc    508875 Jun  5 04:15 input.tar.gz
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc         0 Jun  5 04:15 boinc_lockfile
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc      2558 Jun  5 06:50 pandaJob.out
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc    987109 Jun  5 06:53 agis_schedconf.cvmfs.json
[2025-06-05 12:22:23] drwx------. 4 boinc boinc      4096 Jun  5 06:53 pilot3
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc 205334122 Jun  5 12:13 HITS.44871837._102234.pool.root.1
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc       531 Jun  5 12:14 boinc_task_state.xml
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc      1016 Jun  5 12:15 memory_monitor_summary.json
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc   1598969 Jun  5 12:15 agis_ddmendpoints.agis.ALL.json
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc    438418 Jun  5 12:15 log.44871837._102234.job.log.tgz.1
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc        95 Jun  5 12:16 pilot_heartbeat.json
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc      7689 Jun  5 12:16 heartbeat.json
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc      4416 Jun  5 12:16 pilotlog.txt
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc   1637282 Jun  5 12:16 log.44871837._102234.job.log.1
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc       357 Jun  5 12:16 output.list
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc       620 Jun  5 12:16 runtime_log
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc   2099200 Jun  5 12:16 result.tar.gz
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc      8659 Jun  5 12:16 runtime_log.err
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc       657 Jun  5 12:16 r6lLDmxl6g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme1nKDmk82HHm.diag
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc      8192 Jun  5 12:22 boinc_mmap_file
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc        28 Jun  5 12:22 wrapper_checkpoint.txt
[2025-06-05 12:22:23] -rw-r--r--. 1 boinc boinc     20568 Jun  5 12:22 stderr.txt
[2025-06-05 12:22:23] HITS file was successfully produced:
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc 205334122 Jun  5 12:13 shared/HITS.pool.root.1
[2025-06-05 12:22:23]  *** Contents of shared directory: ***
[2025-06-05 12:22:23] total 420128
[2025-06-05 12:22:23] -rw-r--r--. 2 boinc boinc 222242810 Jun  5 04:15 ATLAS.root_0
[2025-06-05 12:22:23] -rw-r--r--. 2 boinc boinc     15093 Jun  5 04:15 start_atlas.sh
[2025-06-05 12:22:23] -rw-r--r--. 2 boinc boinc    508875 Jun  5 04:15 input.tar.gz
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc 205334122 Jun  5 12:13 HITS.pool.root.1
[2025-06-05 12:22:23] -rw-------. 1 boinc boinc   2099200 Jun  5 12:16 result.tar.gz
12:22:25 (3291): run_atlas exited; CPU time 72079.317451
12:22:25 (3291): called boinc_finish(0)

</stderr_txt>
]]>

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