Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:08:21 (8006): wrapper (7.7.26015): starting
13:08:21 (8006): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 13:08:21] Arguments: --nthreads 12
[2025-06-04 13:08:21] Threads: 12
[2025-06-04 13:08:21] Checking for CVMFS
[2025-06-04 13:08:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:08:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:08:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:08:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:08:22] 2.11.2.0 2984 35915 86620 146788 1 1 17506754 20275201 1 130560 0 16397704 99.983 6526578 7930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 13:08:22] CVMFS is ok
[2025-06-04 13:08:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:08:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:08:22] Further information can be found at the LHC@home message board.
[2025-06-04 13:08:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:08:22] Checking for apptainer binary...
[2025-06-04 13:08:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:08:22] Running /usr/bin/apptainer --version
[2025-06-04 13:08:22] apptainer version 1.3.2-1.el7
[2025-06-04 13:08:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:08:23] c-205-26.aglt2.org
[2025-06-04 13:08:23] apptainer works
[2025-06-04 13:08:23] Set ATHENA_PROC_NUMBER=12
[2025-06-04 13:08:23] Set ATHENA_CORE_NUMBER=12
[2025-06-04 13:08:23] Starting ATLAS job with PandaID=6666948953
[2025-06-04 13:08:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:42:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:42:40]  filesize=359728
[2025-06-04 14:42:40]  filetype=log
[2025-06-04 14:42:40]  guid=3a287a50-ad7f-4b8d-aea9-4e40adcd7e58
[2025-06-04 14:42:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:42:40]  is_altstaged=None
[2025-06-04 14:42:40]  is_tar=False
[2025-06-04 14:42:40]  lfn=log.44871837._066514.job.log.tgz.1
[2025-06-04 14:42:40]  mtime=0
[2025-06-04 14:42:40]  protocol_id=None
[2025-06-04 14:42:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:42:40]  replicas=None
[2025-06-04 14:42:40]  scope=mc23_13p6TeV
[2025-06-04 14:42:40]  status=None
[2025-06-04 14:42:40]  status_code=0
[2025-06-04 14:42:40]  storage_token=
[2025-06-04 14:42:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666948953/log.44871837._066514.job.log.tgz.1
[2025-06-04 14:42:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/f0/log.44871837._066514.job.log.tgz.1
[2025-06-04 14:42:40]  workdir=None
[2025-06-04 14:42:40] ]
[2025-06-04 14:42:40] 2025-06-04 18:42:21,674 | INFO     | transferring file log.44871837._066514.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666948953/log.44871837._066514.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:42:40] 2025-06-04 18:42:21,674 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666948953/log.44871837._066514.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._066514.job
[2025-06-04 14:42:40] 2025-06-04 18:42:21,697 | INFO     | adding to output.list: log.44871837._066514.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/f0/log.44871837._066514.job.log.tg
[2025-06-04 14:42:40] 2025-06-04 18:42:21,698 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:42:40] 2025-06-04 18:42:21,698 | INFO     | summary of transferred files:
[2025-06-04 14:42:40] 2025-06-04 18:42:21,698 | INFO     |  -- lfn=log.44871837._066514.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:42:40] 2025-06-04 18:42:21,698 | INFO     | stage-out finished correctly
[2025-06-04 14:42:40] 2025-06-04 18:42:23,566 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:42:40] 2025-06-04 18:42:23,648 | INFO     | job 6666948953 has state=finished
[2025-06-04 14:42:40] 2025-06-04 18:42:23,649 | INFO     | preparing for final server update for job 6666948953 in state='finished'
[2025-06-04 14:42:40] 2025-06-04 18:42:23,649 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:42:40] 2025-06-04 18:42:23,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:42:40] 2025-06-04 18:42:23,650 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:42:40] 2025-06-04 18:42:23,650 | INFO     | job 6666948953 has finished - writing final server update
[2025-06-04 14:42:40] 2025-06-04 18:42:23,650 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:42:40] 2025-06-04 18:42:23,652 | INFO     | executing command: lscpu
[2025-06-04 14:42:40] 2025-06-04 18:42:23,679 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:42:40] 2025-06-04 18:42:27,507 | WARNING  | process 18077 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:42:40] 2025-06-04 18:42:27,508 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666948953/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:42:40] 2025-06-04 18:42:27,596 | INFO     | number of running child processes to parent process 18077: 1
[2025-06-04 14:42:40] 2025-06-04 18:42:27,597 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:42:40] 2025-06-04 18:42:28,284 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 14:42:40] 2025-06-04 18:42:28,284 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666948953/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:42:40] 2025-06-04 18:42:28,285 | INFO     | extracted standard info from prmon json
[2025-06-04 14:42:40] 2025-06-04 18:42:28,285 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:42:40] 2025-06-04 18:42:28,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:42:40] 2025-06-04 18:42:28,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:42:40] 2025-06-04 18:42:28,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:42:40] 2025-06-04 18:42:28,288 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:42:40] 2025-06-04 18:42:28,288 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,288 | INFO     | sum of deviations: -170584304.0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,288 | INFO     | mean x: 1749059815.0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,289 | INFO     | mean y: 2682838.1529411767
[2025-06-04 14:42:40] 2025-06-04 18:42:28,289 | INFO     | -- intersect: 1569681561.9486334
[2025-06-04 14:42:40] 2025-06-04 18:42:28,289 | INFO     | intersect: 1569681561.9486334
[2025-06-04 14:42:40] 2025-06-04 18:42:28,289 | INFO     | chi2: 0.02566816225445915
[2025-06-04 14:42:40] 2025-06-04 18:42:28,289 | INFO     | -- intersect: 1569681561.9486334
[2025-06-04 14:42:40] 2025-06-04 18:42:28,289 | INFO     | current memory leak: -0.90 B/s (using 85 data points, chi2=0.03)
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | ..............................
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . Timing measurements:
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . get job = 0 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . initial setup = 2 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . payload setup = 9 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . stage-in = 0 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . payload execution = 5594 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . stage-out = 0 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,290 | INFO     | . log creation = 0 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,291 | INFO     | ..............................
[2025-06-04 14:42:40] 2025-06-04 18:42:28,375 | INFO     | 
[2025-06-04 14:42:40] 2025-06-04 18:42:28,375 | INFO     | job summary report
[2025-06-04 14:42:40] 2025-06-04 18:42:28,375 | INFO     | --------------------------------------------------
[2025-06-04 14:42:40] 2025-06-04 18:42:28,376 | INFO     | PanDA job id: 6666948953
[2025-06-04 14:42:40] 2025-06-04 18:42:28,376 | INFO     | task id: 44871837
[2025-06-04 14:42:40] 2025-06-04 18:42:28,376 | INFO     | errors: (none)
[2025-06-04 14:42:40] 2025-06-04 18:42:28,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:42:40] 2025-06-04 18:42:28,376 | INFO     | pilot state: finished 
[2025-06-04 14:42:40] 2025-06-04 18:42:28,376 | INFO     | transexitcode: 0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | exeerrorcode: 0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | exeerrordiag: 
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | exitcode: 0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | exitmsg: OK
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | cpuconsumptiontime: 62178 s
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | nevents: 400
[2025-06-04 14:42:40] 2025-06-04 18:42:28,377 | INFO     | neventsw: 0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,378 | INFO     | pid: 18077
[2025-06-04 14:42:40] 2025-06-04 18:42:28,378 | INFO     | pgrp: 18077
[2025-06-04 14:42:40] 2025-06-04 18:42:28,378 | INFO     | corecount: 12
[2025-06-04 14:42:40] 2025-06-04 18:42:28,378 | INFO     | event service: False
[2025-06-04 14:42:40] 2025-06-04 18:42:28,378 | INFO     | sizes: {0: 2397163, 1: 2397418, 6: 2397624, 12: 2397652, 5608: 2424095, 5609: 2433036, 5611: 2433220, 5615: 2433390}
[2025-06-04 14:42:40] 2025-06-04 18:42:28,378 | INFO     | --------------------------------------------------
[2025-06-04 14:42:40] 2025-06-04 18:42:28,379 | INFO     | 
[2025-06-04 14:42:40] 2025-06-04 18:42:28,379 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:42:40] 2025-06-04 18:42:28,401 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,402 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,402 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,402 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:42:40] 2025-06-04 18:42:28,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:42:40] 2025-06-04 18:42:28,405 | INFO     | job 6666948953 has completed (purged errors)
[2025-06-04 14:42:40] 2025-06-04 18:42:28,405 | INFO     | overall cleanup function is called
[2025-06-04 14:42:40] 2025-06-04 18:42:29,412 | INFO     | --- collectZombieJob: --- 10, [18077]
[2025-06-04 14:42:40] 2025-06-04 18:42:29,413 | INFO     | zombie collector waiting for pid 18077
[2025-06-04 14:42:40] 2025-06-04 18:42:29,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:42:40] 2025-06-04 18:42:29,413 | INFO     | collected zombie processes
[2025-06-04 14:42:40] 2025-06-04 18:42:29,413 | INFO     | will attempt to kill all subprocesses of pid=18077
[2025-06-04 14:42:40] 2025-06-04 18:42:29,505 | INFO     | process IDs to be killed: [18077] (in reverse order)
[2025-06-04 14:42:40] 2025-06-04 18:42:29,555 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:42:40] 2025-06-04 18:42:29,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:42:40] 2025-06-04 18:42:29,559 | INFO     | did not find any defunct processes belonging to 18077
[2025-06-04 14:42:40] 2025-06-04 18:42:29,562 | INFO     | did not find any defunct processes belonging to 18077
[2025-06-04 14:42:40] 2025-06-04 18:42:29,562 | INFO     | ready for new job
[2025-06-04 14:42:40] 2025-06-04 18:42:29,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:42:40] 2025-06-04 18:42:29,564 | INFO     | **************************************
[2025-06-04 14:42:40] 2025-06-04 18:42:29,564 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:42:40] 2025-06-04 18:42:29,564 | INFO     | **************************************
[2025-06-04 14:42:40] 2025-06-04 18:42:29,564 | INFO     | 
[2025-06-04 14:42:40] 2025-06-04 18:42:29,565 | INFO     | architecture information:
[2025-06-04 14:42:40] 2025-06-04 18:42:29,566 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:42:40] 2025-06-04 18:42:29,580 | INFO     | cat /etc/os-release:
[2025-06-04 14:42:40] NAME="CentOS Linux"
[2025-06-04 14:42:40] VERSION="7 (Core)"
[2025-06-04 14:42:40] ID="centos"
[2025-06-04 14:42:40] ID_LIKE="rhel fedora"
[2025-06-04 14:42:40] VERSION_ID="7"
[2025-06-04 14:42:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:42:40] ANSI_COLOR="0;31"
[2025-06-04 14:42:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:42:40] HOME_URL="https://www.centos.org/"
[2025-06-04 14:42:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:42:40] 
[2025-06-04 14:42:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:42:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:42:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:42:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:42:40] 
[2025-06-04 14:42:40] 2025-06-04 18:42:29,580 | INFO     | **************************************
[2025-06-04 14:42:40] 2025-06-04 18:42:30,083 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:42:40] 2025-06-04 18:42:30,099 | INFO     | sufficient remaining disk space (29381099520 B)
[2025-06-04 14:42:40] 2025-06-04 18:42:30,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:42:40] 2025-06-04 18:42:30,100 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:42:40] 2025-06-04 18:42:30,100 | INFO     | update_server=False
[2025-06-04 14:42:40] 2025-06-04 18:42:30,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:42:40] 2025-06-04 18:42:30,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:42:40] 2025-06-04 18:42:30,101 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:42:40] 2025-06-04 18:42:30,101 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:42:40] 2025-06-04 18:42:30,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:42:40] 2025-06-04 18:42:30,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:42:40] 2025-06-04 18:42:30,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:42:40] 2025-06-04 18:42:30,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:42:40] 2025-06-04 18:42:30,111 | INFO     | all payload control threads have been joined
[2025-06-04 14:42:40] 2025-06-04 18:42:30,120 | INFO     | all job control threads have been joined
[2025-06-04 14:42:40] 2025-06-04 18:42:30,761 | INFO     | all data control threads have been joined
[2025-06-04 14:42:40] 2025-06-04 18:42:31,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:42:40] 2025-06-04 18:42:31,105 | INFO     | aborting loop
[2025-06-04 14:42:40] 2025-06-04 18:42:31,106 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,106 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,117 | INFO     | [payload] control thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,125 | INFO     | [job] control thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,338 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,340 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,494 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,688 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,688 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:31,766 | INFO     | [data] control thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:32,108 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:32,111 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:32,345 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:32,493 | INFO     | [job] validate thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:32,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:34,108 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:42:40] 2025-06-04 18:42:34,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788278200128)>', '<ExcThread(monitor, started 139787629491968)>']
[2025-06-04 14:42:40] 2025-06-04 18:42:35,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:42:40] 2025-06-04 18:42:35,124 | INFO     | [monitor] control thread has ended
[2025-06-04 14:42:40] 2025-06-04 18:42:39,966 | INFO     | all workflow threads have been joined
[2025-06-04 14:42:40] 2025-06-04 18:42:39,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:42:40] 2025-06-04 18:42:39,967 | INFO     | traces error code: 0
[2025-06-04 14:42:40] 2025-06-04 18:42:39,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:42:40] 2025-06-04 18:42:40,053 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:42:40] 2025-06-04 18:42:40,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:42:40] 2025-06-04 18:42:40,061 [wrapper] pilotpid: 11618
[2025-06-04 14:42:40] 2025-06-04 18:42:40,064 [wrapper] Pilot exit status: 0
[2025-06-04 14:42:40] 2025-06-04 18:42:40,079 [wrapper] pandaids: 6666948953
[2025-06-04 14:42:40] 2025-06-04 18:42:40,117 [wrapper] cleanup supervisor_pilot 14949 11619
[2025-06-04 14:42:40] 2025-06-04 18:42:40,121 [wrapper] Test setup, not cleaning
[2025-06-04 14:42:40] 2025-06-04 18:42:40,124 [wrapper] apfmon messages muted
[2025-06-04 14:42:40] 2025-06-04 18:42:40,127 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:42:40] 2025-06-04 18:42:40,131 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:42:40]  *** Error codes and diagnostics ***
[2025-06-04 14:42:40]     "exeErrorCode": 0,
[2025-06-04 14:42:40]     "exeErrorDiag": "",
[2025-06-04 14:42:40]     "pilotErrorCode": 0,
[2025-06-04 14:42:40]     "pilotErrorDiag": "",
[2025-06-04 14:42:40]  *** Listing of results directory ***
[2025-06-04 14:42:40] total 421276
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas    495897 May 27 07:17 pilot3.tar.gz
[2025-06-04 14:42:40] -rwx------ 1 boincer umatlas     37140 May 27 07:20 runpilot2-wrapper.sh
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas      5111 May 27 07:20 queuedata.json
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas       100 Jun  4 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:42:40] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 13:08 run_atlas
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas       105 Jun  4 13:08 job.xml
[2025-06-04 14:42:40] -rw-r--r-- 2 boincer umatlas 223829574 Jun  4 13:08 EVNT.44871834._002619.pool.root.1
[2025-06-04 14:42:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 13:08 start_atlas.sh
[2025-06-04 14:42:40] drwxrwx--x 2 boincer umatlas      4096 Jun  4 13:08 shared
[2025-06-04 14:42:40] -rw-r--r-- 2 boincer umatlas    508867 Jun  4 13:08 input.tar.gz
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas         0 Jun  4 13:08 boinc_lockfile
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 13:08 pandaJob.out
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas    990984 Jun  4 13:08 agis_schedconf.cvmfs.json
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas   1598969 Jun  4 13:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:42:40] drwx------ 4 boincer umatlas      4096 Jun  4 13:08 pilot3
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 14:36 init_data.xml
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas 201957705 Jun  4 14:41 HITS.44871837._066514.pool.root.1
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas        95 Jun  4 14:41 pilot_heartbeat.json
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas       529 Jun  4 14:42 boinc_task_state.xml
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas      1046 Jun  4 14:42 memory_monitor_summary.json
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas    359728 Jun  4 14:42 log.44871837._066514.job.log.tgz.1
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas      7745 Jun  4 14:42 heartbeat.json
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 14:42 boinc_mmap_file
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas        27 Jun  4 14:42 wrapper_checkpoint.txt
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas      4476 Jun  4 14:42 pilotlog.txt
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas    527129 Jun  4 14:42 log.44871837._066514.job.log.1
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas       357 Jun  4 14:42 output.list
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas       620 Jun  4 14:42 runtime_log
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas    901120 Jun  4 14:42 result.tar.gz
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas       660 Jun  4 14:42 ZPZMDmeX7d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcFZKDmd16vzm.diag
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 14:42 runtime_log.err
[2025-06-04 14:42:40] -rw-r--r-- 1 boincer umatlas     21129 Jun  4 14:42 stderr.txt
[2025-06-04 14:42:40] HITS file was successfully produced:
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas 201957705 Jun  4 14:41 shared/HITS.pool.root.1
[2025-06-04 14:42:40]  *** Contents of shared directory: ***
[2025-06-04 14:42:40] total 417212
[2025-06-04 14:42:40] -rw-r--r-- 2 boincer umatlas 223829574 Jun  4 13:08 ATLAS.root_0
[2025-06-04 14:42:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 13:08 start_atlas.sh
[2025-06-04 14:42:40] -rw-r--r-- 2 boincer umatlas    508867 Jun  4 13:08 input.tar.gz
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas 201957705 Jun  4 14:41 HITS.pool.root.1
[2025-06-04 14:42:40] -rw------- 1 boincer umatlas    901120 Jun  4 14:42 result.tar.gz
14:42:41 (8006): run_atlas exited; CPU time 62147.477789
14:42:41 (8006): called boinc_finish(0)

</stderr_txt>
]]>

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