Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:20:48 (30592): wrapper (7.7.26015): starting
04:20:48 (30592): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 04:20:48] Arguments: --nthreads 8
[2025-06-05 04:20:48] Threads: 8
[2025-06-05 04:20:48] Checking for CVMFS
[2025-06-05 04:20:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 04:20:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 04:20:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 04:20:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 04:20:51] 2.11.2.0 17879 34063 90356 146801 2 16 19297229 25165824 2749 130560 0 18318801 99.846 18663625 2055 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 04:20:51] CVMFS is ok
[2025-06-05 04:20:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 04:20:51] Checking for apptainer binary...
[2025-06-05 04:20:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 04:20:51] Running /usr/bin/apptainer --version
[2025-06-05 04:20:51] apptainer version 1.3.2-1.el7
[2025-06-05 04:20:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 04:51:15] cg-vwn476.simple-grid.lan
[2025-06-05 04:51:15] apptainer works
[2025-06-05 04:51:15] Set ATHENA_PROC_NUMBER=8
[2025-06-05 04:51:15] Set ATHENA_CORE_NUMBER=8
[2025-06-05 04:51:15] Starting ATLAS job with PandaID=6678889087
[2025-06-05 04:51:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:59:53]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:59:53] 2025-06-05 06:27:19,748 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6678889087/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 08:59:53] 2025-06-05 06:27:19,749 | INFO     | extracted standard info from prmon json
[2025-06-05 08:59:53] 2025-06-05 06:27:19,749 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:59:53] 2025-06-05 06:27:19,749 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:59:53] 2025-06-05 06:27:19,750 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:59:53] 2025-06-05 06:27:19,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:59:53] 2025-06-05 06:27:19,754 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:59:53] 2025-06-05 06:27:19,755 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,756 | INFO     | sum of deviations: 75492040718.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,757 | INFO     | mean x: 1749098676.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,757 | INFO     | mean y: 2404188.0653266334
[2025-06-05 08:59:53] 2025-06-05 06:27:19,757 | INFO     | -- intersect: -54034292233.86659
[2025-06-05 08:59:53] 2025-06-05 06:27:19,757 | INFO     | intersect: -54034292233.86659
[2025-06-05 08:59:53] 2025-06-05 06:27:19,757 | INFO     | chi2: 6.53406177297773
[2025-06-05 08:59:53] 2025-06-05 06:27:19,758 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 08:59:53] 2025-06-05 06:27:19,766 | INFO     | sum of deviations: 86912220500.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,767 | INFO     | mean x: 1749098523.5
[2025-06-05 08:59:53] 2025-06-05 06:27:19,767 | INFO     | mean y: 2413648.4226804124
[2025-06-05 08:59:53] 2025-06-05 06:27:19,767 | INFO     | -- intersect: -67144034493.26004
[2025-06-05 08:59:53] 2025-06-05 06:27:19,767 | INFO     | intersect: -67144034493.26004
[2025-06-05 08:59:53] 2025-06-05 06:27:19,767 | INFO     | chi2: 5.761649414489308
[2025-06-05 08:59:53] 2025-06-05 06:27:19,767 | INFO     | current chi2=5.761649414489308 (change=11.82132011183015 %)
[2025-06-05 08:59:53] 2025-06-05 06:27:19,768 | INFO     | right removable region: 193
[2025-06-05 08:59:53] 2025-06-05 06:27:19,768 | INFO     | sum of square deviations: 2263977332.5
[2025-06-05 08:59:53] 2025-06-05 06:27:19,769 | INFO     | sum of deviations: 8646348101.499998
[2025-06-05 08:59:53] 2025-06-05 06:27:19,769 | INFO     | mean x: 1749098828.5
[2025-06-05 08:59:53] 2025-06-05 06:27:19,770 | INFO     | mean y: 2460879.6340206186
[2025-06-05 08:59:53] 2025-06-05 06:27:19,770 | INFO     | -- intersect: -6677516484.996614
[2025-06-05 08:59:53] 2025-06-05 06:27:19,770 | INFO     | intersect: -6677516484.996614
[2025-06-05 08:59:53] 2025-06-05 06:27:19,770 | INFO     | chi2: 1.8531032886336702
[2025-06-05 08:59:53] 2025-06-05 06:27:19,770 | INFO     | current chi2=1.8531032886336702 (change=71.63933625027292 %)
[2025-06-05 08:59:53] 2025-06-05 06:27:19,771 | INFO     | sum of square deviations: 2093397390.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,772 | INFO     | sum of deviations: -16188381544.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,772 | INFO     | mean x: 1749098981.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,772 | INFO     | mean y: 2482845.9417989417
[2025-06-05 08:59:53] 2025-06-05 06:27:19,772 | INFO     | -- intersect: 13528381845.295002
[2025-06-05 08:59:53] 2025-06-05 06:27:19,772 | INFO     | intersect: 13528381845.295002
[2025-06-05 08:59:53] 2025-06-05 06:27:19,773 | INFO     | chi2: 0.9130773750200686
[2025-06-05 08:59:53] 2025-06-05 06:27:19,773 | INFO     | current chi2=0.9130773750200686 (change=50.72711917243973 %)
[2025-06-05 08:59:53] 2025-06-05 06:27:19,773 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,774 | INFO     | sum of deviations: -9642457087.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | mean x: 1749099133.5
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | mean y: 2476667.1195652173
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | -- intersect: 8733860379.00815
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | intersect: 8733860379.00815
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | chi2: 0.8764554574812224
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | current chi2=0.8764554574812224 (change=4.010823019028504 %)
[2025-06-05 08:59:53] 2025-06-05 06:27:19,775 | INFO     | left removable region: 30
[2025-06-05 08:59:53] 2025-06-05 06:27:19,776 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,784 | INFO     | sum of deviations: 2474044893.0000005
[2025-06-05 08:59:53] 2025-06-05 06:27:19,784 | INFO     | mean x: 1749099408.0
[2025-06-05 08:59:53] 2025-06-05 06:27:19,784 | INFO     | mean y: 2489514.7423312883
[2025-06-05 08:59:53] 2025-06-05 06:27:19,785 | INFO     | -- intersect: -3220042033.3245187
[2025-06-05 08:59:53] 2025-06-05 06:27:19,785 | INFO     | intersect: -3220042033.3245187
[2025-06-05 08:59:53] 2025-06-05 06:27:19,785 | INFO     | chi2: 0.00018806946550617537
[2025-06-05 08:59:53] 2025-06-05 06:27:19,785 | INFO     | -- intersect: -3220042033.3245187
[2025-06-05 08:59:53] 2025-06-05 06:27:19,785 | INFO     | current memory leak: 1.84 B/s (using 163 data points, chi2=0.00)
[2025-06-05 08:59:53] 2025-06-05 06:27:19,786 | INFO     | ..............................
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . Timing measurements:
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . get job = 0 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . initial setup = 7 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . payload setup = 193 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . stage-in = 0 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . payload execution = 12264 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . stage-out = 2 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | . log creation = 0 s
[2025-06-05 08:59:53] 2025-06-05 06:27:19,787 | INFO     | ..............................
[2025-06-05 08:59:53] 2025-06-05 06:27:20,340 | INFO     | 
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | job summary report
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | --------------------------------------------------
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | PanDA job id: 6678889087
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | task id: 45006595
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | errors: (none)
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | pilot state: finished 
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | transexitcode: 0
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | exeerrorcode: 0
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | exeerrordiag: 
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | exitcode: 0
[2025-06-05 08:59:53] 2025-06-05 06:27:20,341 | INFO     | exitmsg: OK
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | cpuconsumptiontime: 45556 s
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | nevents: 400
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | neventsw: 0
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | pid: 29516
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | pgrp: 29516
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | corecount: 8
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | event service: False
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | sizes: {0: 2397121, 1: 2397320, 12: 2397320, 22: 2397348, 33: 2397376, 44: 2397432, 54: 2397588, 65: 2397616, 76: 2397644, 87: 2397700, 90: 2397934, 97: 2398242, 1
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | --------------------------------------------------
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | 
[2025-06-05 08:59:53] 2025-06-05 06:27:20,342 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 08:59:53] 2025-06-05 06:27:20,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | job 6678889087 has completed (purged errors)
[2025-06-05 08:59:53] 2025-06-05 06:27:20,552 | INFO     | overall cleanup function is called
[2025-06-05 08:59:53] 2025-06-05 06:27:21,560 | INFO     | --- collectZombieJob: --- 10, [29516]
[2025-06-05 08:59:53] 2025-06-05 06:27:21,561 | INFO     | zombie collector waiting for pid 29516
[2025-06-05 08:59:53] 2025-06-05 06:27:21,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:59:53] 2025-06-05 06:27:21,561 | INFO     | collected zombie processes
[2025-06-05 08:59:53] 2025-06-05 06:27:21,561 | INFO     | will attempt to kill all subprocesses of pid=29516
[2025-06-05 08:59:53] 2025-06-05 06:27:21,683 | INFO     | process IDs to be killed: [29516] (in reverse order)
[2025-06-05 08:59:53] 2025-06-05 06:27:22,230 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:59:53] 2025-06-05 06:27:22,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:59:53] 2025-06-05 06:27:22,233 | INFO     | did not find any defunct processes belonging to 29516
[2025-06-05 08:59:53] 2025-06-05 06:27:22,236 | INFO     | did not find any defunct processes belonging to 29516
[2025-06-05 08:59:53] 2025-06-05 06:27:22,237 | INFO     | ready for new job
[2025-06-05 08:59:53] 2025-06-05 06:27:22,237 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:59:53] 2025-06-05 06:27:22,239 | INFO     | **************************************
[2025-06-05 08:59:53] 2025-06-05 06:27:22,239 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:59:53] 2025-06-05 06:27:22,239 | INFO     | **************************************
[2025-06-05 08:59:53] 2025-06-05 06:27:22,239 | INFO     | 
[2025-06-05 08:59:53] 2025-06-05 06:27:22,240 | INFO     | pilot is running in a VM
[2025-06-05 08:59:53] 2025-06-05 06:27:22,240 | INFO     | architecture information:
[2025-06-05 08:59:53] 2025-06-05 06:27:22,255 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:59:53] 2025-06-05 06:27:22,523 | INFO     | cat /etc/os-release:
[2025-06-05 08:59:53] NAME="CentOS Linux"
[2025-06-05 08:59:53] VERSION="7 (Core)"
[2025-06-05 08:59:53] ID="centos"
[2025-06-05 08:59:53] ID_LIKE="rhel fedora"
[2025-06-05 08:59:53] VERSION_ID="7"
[2025-06-05 08:59:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:59:53] ANSI_COLOR="0;31"
[2025-06-05 08:59:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:59:53] HOME_URL="https://www.centos.org/"
[2025-06-05 08:59:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:59:53] 
[2025-06-05 08:59:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:59:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:59:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:59:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:59:53] 
[2025-06-05 08:59:53] 2025-06-05 06:27:22,523 | INFO     | **************************************
[2025-06-05 08:59:53] 2025-06-05 06:27:23,026 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 08:59:53] 2025-06-05 06:27:23,258 | INFO     | sufficient remaining disk space (497653121024 B)
[2025-06-05 08:59:53] 2025-06-05 06:27:23,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:59:53] 2025-06-05 06:27:23,259 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:59:53] 2025-06-05 06:27:23,259 | INFO     | update_server=False
[2025-06-05 08:59:53] 2025-06-05 06:27:23,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:59:53] 2025-06-05 06:27:23,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:59:53] 2025-06-05 06:27:23,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:59:53] 2025-06-05 06:27:23,262 | INFO     | aborting loop
[2025-06-05 08:59:53] 2025-06-05 06:27:23,317 | INFO     | all data control threads have been joined
[2025-06-05 08:59:53] 2025-06-05 06:27:23,489 | INFO     | all job control threads have been joined
[2025-06-05 08:59:53] 2025-06-05 06:27:23,698 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:59:53] 2025-06-05 06:27:23,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:59:53] 2025-06-05 06:27:23,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:59:53] 2025-06-05 06:27:24,265 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,268 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,327 | INFO     | [data] control thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,409 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,495 | INFO     | [job] control thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,569 | INFO     | all payload control threads have been joined
[2025-06-05 08:59:53] 2025-06-05 06:27:24,827 | INFO     | [job] validate thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,829 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,871 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:24,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:59:53] 2025-06-05 06:27:25,265 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:25,329 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:25,348 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:25,575 | INFO     | [payload] control thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:25,640 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:25,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:25,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:59:53] 2025-06-05 06:27:25,954 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:29,825 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:59:53] 2025-06-05 06:27:29,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521891301184)>', '<ExcThread(monitor, started 140521305523968)>']
[2025-06-05 08:59:53] 2025-06-05 06:27:30,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:59:53] 2025-06-05 06:27:30,741 | INFO     | [monitor] control thread has ended
[2025-06-05 08:59:53] 2025-06-05 06:27:34,917 | INFO     | all workflow threads have been joined
[2025-06-05 08:59:53] 2025-06-05 06:27:34,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:59:53] 2025-06-05 06:27:34,918 | INFO     | traces error code: 0
[2025-06-05 08:59:53] 2025-06-05 06:27:34,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:59:53] 2025-06-05 06:27:35,308 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:59:53] 2025-06-05 06:27:35,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:59:53] 2025-06-05 06:27:35,418 [wrapper] pilotpid: 22797
[2025-06-05 08:59:53] 2025-06-05 06:27:35,469 [wrapper] Pilot exit status: 0
[2025-06-05 08:59:53] 2025-06-05 06:27:35,938 [wrapper] pandaids: 6678889087
[2025-06-05 08:59:53] 2025-06-05 06:27:36,844 [wrapper] cleanup supervisor_pilot 29187 22798
[2025-06-05 08:59:53] 2025-06-05 06:27:36,868 [wrapper] Test setup, not cleaning
[2025-06-05 08:59:53] 2025-06-05 06:27:36,981 [wrapper] apfmon messages muted
[2025-06-05 08:59:53] 2025-06-05 06:27:37,096 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:59:53] 2025-06-05 06:27:37,170 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:59:53]  *** Error codes and diagnostics ***
[2025-06-05 08:59:53]     "exeErrorCode": 0,
[2025-06-05 08:59:53]     "exeErrorDiag": "",
[2025-06-05 08:59:53]     "pilotErrorCode": 0,
[2025-06-05 08:59:53]     "pilotErrorDiag": "",
[2025-06-05 08:59:53]  *** Listing of results directory ***
[2025-06-05 08:59:53] total 393720
[2025-06-05 08:59:53] -rwx------. 1 boinc boinc     37140 Jun  4 10:31 runpilot2-wrapper.sh
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc    495897 Jun  4 10:31 pilot3.tar.gz
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc      5111 Jun  4 10:32 queuedata.json
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc       100 Jun  5 04:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:59:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 04:20 run_atlas
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc       105 Jun  5 04:20 job.xml
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc      6391 Jun  5 04:20 init_data.xml
[2025-06-05 08:59:53] -rw-r--r--. 2 boinc boinc 215653938 Jun  5 04:20 EVNT.45006593._001074.pool.root.1
[2025-06-05 08:59:53] -rw-r--r--. 2 boinc boinc     15093 Jun  5 04:20 start_atlas.sh
[2025-06-05 08:59:53] drwxrwx--x. 2 boinc boinc        68 Jun  5 04:20 shared
[2025-06-05 08:59:53] -rw-r--r--. 2 boinc boinc    508879 Jun  5 04:20 input.tar.gz
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc         0 Jun  5 04:20 boinc_lockfile
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc      2525 Jun  5 04:51 pandaJob.out
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc    987109 Jun  5 04:54 agis_schedconf.cvmfs.json
[2025-06-05 08:59:53] drwx------. 4 boinc boinc      4096 Jun  5 04:54 pilot3
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc 180768446 Jun  5 08:24 HITS.45006595._055664.pool.root.1
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc       531 Jun  5 08:24 boinc_task_state.xml
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc      1014 Jun  5 08:25 memory_monitor_summary.json
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc   1598969 Jun  5 08:25 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc    374501 Jun  5 08:25 log.45006595._055664.job.log.tgz.1
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc        95 Jun  5 08:26 pilot_heartbeat.json
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc      7689 Jun  5 08:27 heartbeat.json
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc      4416 Jun  5 08:27 pilotlog.txt
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc   1092462 Jun  5 08:27 log.45006595._055664.job.log.1
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc       357 Jun  5 08:27 output.list
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc       620 Jun  5 08:27 runtime_log
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc   1484800 Jun  5 08:27 result.tar.gz
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc       657 Jun  5 08:27 yN4MDmZiyg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpmnKDmh2iCSm.diag
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc      8659 Jun  5 08:27 runtime_log.err
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc      8192 Jun  5 08:59 boinc_mmap_file
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc        28 Jun  5 08:59 wrapper_checkpoint.txt
[2025-06-05 08:59:53] -rw-r--r--. 1 boinc boinc     20523 Jun  5 08:59 stderr.txt
[2025-06-05 08:59:53] HITS file was successfully produced:
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc 180768446 Jun  5 08:24 shared/HITS.pool.root.1
[2025-06-05 08:59:53]  *** Contents of shared directory: ***
[2025-06-05 08:59:53] total 389100
[2025-06-05 08:59:53] -rw-r--r--. 2 boinc boinc 215653938 Jun  5 04:20 ATLAS.root_0
[2025-06-05 08:59:53] -rw-r--r--. 2 boinc boinc     15093 Jun  5 04:20 start_atlas.sh
[2025-06-05 08:59:53] -rw-r--r--. 2 boinc boinc    508879 Jun  5 04:20 input.tar.gz
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc 180768446 Jun  5 08:24 HITS.pool.root.1
[2025-06-05 08:59:53] -rw-------. 1 boinc boinc   1484800 Jun  5 08:27 result.tar.gz
08:59:55 (30592): run_atlas exited; CPU time 45711.078671
08:59:55 (30592): called boinc_finish(0)

</stderr_txt>
]]>

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