Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:03:09 (12093): wrapper (7.7.26015): starting
13:03:09 (12093): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 13:03:09] Arguments: --nthreads 10
[2025-06-04 13:03:09] Threads: 10
[2025-06-04 13:03:09] Checking for CVMFS
[2025-06-04 13:03:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:03:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:03:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:03:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:03:11] 2.11.2.0 1570 109118 304572 146788 2 677 10895372 18432000 18743 130560 0 488481117 99.074 1003294705 35416 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 13:03:11] CVMFS is ok
[2025-06-04 13:03:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:03:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:03:11] Further information can be found at the LHC@home message board.
[2025-06-04 13:03:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:03:11] Checking for apptainer binary...
[2025-06-04 13:03:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:03:11] Running /usr/bin/apptainer --version
[2025-06-04 13:03:11] apptainer version 1.3.2-1.el7
[2025-06-04 13:03:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:03:15] c-210-9.aglt2.org
[2025-06-04 13:03:15] apptainer works
[2025-06-04 13:03:15] Set ATHENA_PROC_NUMBER=10
[2025-06-04 13:03:15] Set ATHENA_CORE_NUMBER=10
[2025-06-04 13:03:15] Starting ATLAS job with PandaID=6668327129
[2025-06-04 13:03:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:10:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:10:34] 2025-06-04 23:10:19,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:10:34] 2025-06-04 23:10:19,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:10:34] 2025-06-04 23:10:19,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:10:34] 2025-06-04 23:10:19,716 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:10:34] 2025-06-04 23:10:19,717 | INFO     | sum of square deviations: 14467098228.197142
[2025-06-04 19:10:34] 2025-06-04 23:10:19,720 | INFO     | sum of deviations: 77167923159.5722
[2025-06-04 19:10:34] 2025-06-04 23:10:19,721 | INFO     | mean x: 1749067610.7972221
[2025-06-04 19:10:34] 2025-06-04 23:10:19,721 | INFO     | mean y: 2554846.172222222
[2025-06-04 19:10:34] 2025-06-04 23:10:19,721 | INFO     | -- intersect: -9327022714.02082
[2025-06-04 19:10:34] 2025-06-04 23:10:19,721 | INFO     | intersect: -9327022714.02082
[2025-06-04 19:10:34] 2025-06-04 23:10:19,722 | INFO     | chi2: 2.61349299961099
[2025-06-04 19:10:34] 2025-06-04 23:10:19,722 | INFO     | sum of square deviations: 13872663902.749342
[2025-06-04 19:10:34] 2025-06-04 23:10:19,726 | INFO     | sum of deviations: 100668008953.58861
[2025-06-04 19:10:34] 2025-06-04 23:10:19,726 | INFO     | mean x: 1749067458.3014085
[2025-06-04 19:10:34] 2025-06-04 23:10:19,726 | INFO     | mean y: 2560803.0225352114
[2025-06-04 19:10:34] 2025-06-04 23:10:19,726 | INFO     | -- intersect: -12689676231.410437
[2025-06-04 19:10:34] 2025-06-04 23:10:19,726 | INFO     | intersect: -12689676231.410437
[2025-06-04 19:10:34] 2025-06-04 23:10:19,727 | INFO     | chi2: 1.8278613949245281
[2025-06-04 19:10:34] 2025-06-04 23:10:19,727 | INFO     | current chi2=1.8278613949245281 (change=30.060597246803432 %)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,727 | INFO     | sum of square deviations: 13294698204.000061
[2025-06-04 19:10:34] 2025-06-04 23:10:19,731 | INFO     | sum of deviations: 98924911644.40013
[2025-06-04 19:10:34] 2025-06-04 23:10:19,731 | INFO     | mean x: 1749067305.8
[2025-06-04 19:10:34] 2025-06-04 23:10:19,731 | INFO     | mean y: 2560343.0914285714
[2025-06-04 19:10:34] 2025-06-04 23:10:19,731 | INFO     | -- intersect: -13012126115.478533
[2025-06-04 19:10:34] 2025-06-04 23:10:19,731 | INFO     | intersect: -13012126115.478533
[2025-06-04 19:10:34] 2025-06-04 23:10:19,732 | INFO     | chi2: 1.8279453100361858
[2025-06-04 19:10:34] 2025-06-04 23:10:19,732 | INFO     | current chi2=1.8279453100361858 (change=-0.004590890309879452 %)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,732 | INFO     | right removable region: 349
[2025-06-04 19:10:34] 2025-06-04 23:10:19,733 | INFO     | sum of square deviations: 13872598632.74933
[2025-06-04 19:10:34] 2025-06-04 23:10:19,736 | INFO     | sum of deviations: 4847013006.535206
[2025-06-04 19:10:34] 2025-06-04 23:10:19,736 | INFO     | mean x: 1749067763.3014085
[2025-06-04 19:10:34] 2025-06-04 23:10:19,736 | INFO     | mean y: 2573318.9295774647
[2025-06-04 19:10:34] 2025-06-04 23:10:19,736 | INFO     | -- intersect: -608541759.2519363
[2025-06-04 19:10:34] 2025-06-04 23:10:19,736 | INFO     | intersect: -608541759.2519363
[2025-06-04 19:10:34] 2025-06-04 23:10:19,737 | INFO     | chi2: 0.8498095710811264
[2025-06-04 19:10:34] 2025-06-04 23:10:19,737 | INFO     | current chi2=0.8498095710811264 (change=67.48376325447904 %)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,738 | INFO     | sum of square deviations: 13294610974.788572
[2025-06-04 19:10:34] 2025-06-04 23:10:19,741 | INFO     | sum of deviations: -5163978173.194286
[2025-06-04 19:10:34] 2025-06-04 23:10:19,741 | INFO     | mean x: 1749067915.8057144
[2025-06-04 19:10:34] 2025-06-04 23:10:19,741 | INFO     | mean y: 2575944.497142857
[2025-06-04 19:10:34] 2025-06-04 23:10:19,741 | INFO     | -- intersect: 681960136.9179198
[2025-06-04 19:10:34] 2025-06-04 23:10:19,742 | INFO     | intersect: 681960136.9179198
[2025-06-04 19:10:34] 2025-06-04 23:10:19,742 | INFO     | chi2: 0.8081622076962939
[2025-06-04 19:10:34] 2025-06-04 23:10:19,742 | INFO     | current chi2=0.8081622076962939 (change=4.900787753172612 %)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,742 | INFO     | left removable region: 20
[2025-06-04 19:10:34] 2025-06-04 23:10:19,743 | INFO     | sum of square deviations: 11042248161.124638
[2025-06-04 19:10:34] 2025-06-04 23:10:19,746 | INFO     | sum of deviations: 15709377223.917942
[2025-06-04 19:10:34] 2025-06-04 23:10:19,746 | INFO     | mean x: 1749067885.3161094
[2025-06-04 19:10:34] 2025-06-04 23:10:19,746 | INFO     | mean y: 2582935.2796352585
[2025-06-04 19:10:34] 2025-06-04 23:10:19,746 | INFO     | -- intersect: -2485747955.290817
[2025-06-04 19:10:34] 2025-06-04 23:10:19,746 | INFO     | intersect: -2485747955.290817
[2025-06-04 19:10:34] 2025-06-04 23:10:19,747 | INFO     | chi2: 0.0030403970058883985
[2025-06-04 19:10:34] 2025-06-04 23:10:19,747 | INFO     | -- intersect: -2485747955.290817
[2025-06-04 19:10:34] 2025-06-04 23:10:19,747 | INFO     | current memory leak: 1.42 B/s (using 329 data points, chi2=0.00)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,748 | INFO     | ..............................
[2025-06-04 19:10:34] 2025-06-04 23:10:19,748 | INFO     | . Timing measurements:
[2025-06-04 19:10:34] 2025-06-04 23:10:19,748 | INFO     | . get job = 0 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,748 | INFO     | . initial setup = 3 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,748 | INFO     | . payload setup = 15 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,748 | INFO     | . stage-in = 0 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,749 | INFO     | . payload execution = 21943 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,749 | INFO     | . stage-out = 2 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,749 | INFO     | . log creation = 0 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,749 | INFO     | ..............................
[2025-06-04 19:10:34] 2025-06-04 23:10:19,857 | INFO     | 
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | job summary report
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | --------------------------------------------------
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | PanDA job id: 6668327129
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | task id: 44871837
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | errors: (none)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | pilot state: finished 
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | transexitcode: 0
[2025-06-04 19:10:34] 2025-06-04 23:10:19,858 | INFO     | exeerrorcode: 0
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | exeerrordiag: 
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | exitcode: 0
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | exitmsg: OK
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | cpuconsumptiontime: 67979 s
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | nevents: 400
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | neventsw: 0
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | pid: 34243
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | pgrp: 34243
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | corecount: 10
[2025-06-04 19:10:34] 2025-06-04 23:10:19,859 | INFO     | event service: False
[2025-06-04 19:10:34] 2025-06-04 23:10:19,860 | INFO     | sizes: {0: 2397391, 8: 2397597, 11: 2397625, 21963: 2431603, 21967: 2440544, 21970: 2440600, 21987: 2440898}
[2025-06-04 19:10:34] 2025-06-04 23:10:19,860 | INFO     | --------------------------------------------------
[2025-06-04 19:10:34] 2025-06-04 23:10:19,860 | INFO     | 
[2025-06-04 19:10:34] 2025-06-04 23:10:19,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 19:10:34] 2025-06-04 23:10:19,900 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,900 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,900 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,900 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,901 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:10:34] 2025-06-04 23:10:19,902 | INFO     | job 6668327129 has completed (purged errors)
[2025-06-04 19:10:34] 2025-06-04 23:10:19,903 | INFO     | overall cleanup function is called
[2025-06-04 19:10:34] 2025-06-04 23:10:20,643 | INFO     | 22009s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 19:10:34] 2025-06-04 23:10:20,911 | INFO     | --- collectZombieJob: --- 10, [34243]
[2025-06-04 19:10:34] 2025-06-04 23:10:20,912 | INFO     | zombie collector waiting for pid 34243
[2025-06-04 19:10:34] 2025-06-04 23:10:20,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:10:34] 2025-06-04 23:10:20,912 | INFO     | collected zombie processes
[2025-06-04 19:10:34] 2025-06-04 23:10:20,912 | INFO     | will attempt to kill all subprocesses of pid=34243
[2025-06-04 19:10:34] 2025-06-04 23:10:21,572 | INFO     | process IDs to be killed: [34243] (in reverse order)
[2025-06-04 19:10:34] 2025-06-04 23:10:21,698 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:10:34] 2025-06-04 23:10:21,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:10:34] 2025-06-04 23:10:21,722 | INFO     | did not find any defunct processes belonging to 34243
[2025-06-04 19:10:34] 2025-06-04 23:10:21,743 | INFO     | did not find any defunct processes belonging to 34243
[2025-06-04 19:10:34] 2025-06-04 23:10:21,744 | INFO     | ready for new job
[2025-06-04 19:10:34] 2025-06-04 23:10:21,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:10:34] 2025-06-04 23:10:21,746 | INFO     | **************************************
[2025-06-04 19:10:34] 2025-06-04 23:10:21,746 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:10:34] 2025-06-04 23:10:21,746 | INFO     | **************************************
[2025-06-04 19:10:34] 2025-06-04 23:10:21,746 | INFO     | 
[2025-06-04 19:10:34] 2025-06-04 23:10:21,798 | INFO     | architecture information:
[2025-06-04 19:10:34] 2025-06-04 23:10:21,816 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:10:34] 2025-06-04 23:10:21,852 | INFO     | cat /etc/os-release:
[2025-06-04 19:10:34] NAME="CentOS Linux"
[2025-06-04 19:10:34] VERSION="7 (Core)"
[2025-06-04 19:10:34] ID="centos"
[2025-06-04 19:10:34] ID_LIKE="rhel fedora"
[2025-06-04 19:10:34] VERSION_ID="7"
[2025-06-04 19:10:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:10:34] ANSI_COLOR="0;31"
[2025-06-04 19:10:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:10:34] HOME_URL="https://www.centos.org/"
[2025-06-04 19:10:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:10:34] 
[2025-06-04 19:10:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:10:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:10:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:10:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:10:34] 
[2025-06-04 19:10:34] 2025-06-04 23:10:21,853 | INFO     | **************************************
[2025-06-04 19:10:34] 2025-06-04 23:10:22,218 | INFO     | PID=19900 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 19:10:34] 2025-06-04 23:10:22,218 | INFO     | .. there are 34 such processes running
[2025-06-04 19:10:34] 2025-06-04 23:10:22,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 19:10:34] 2025-06-04 23:10:22,399 | INFO     | sufficient remaining disk space (56932433920 B)
[2025-06-04 19:10:34] 2025-06-04 23:10:22,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:10:34] 2025-06-04 23:10:22,400 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:10:34] 2025-06-04 23:10:22,400 | INFO     | update_server=False
[2025-06-04 19:10:34] 2025-06-04 23:10:22,400 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:10:34] 2025-06-04 23:10:22,400 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:10:34] 2025-06-04 23:10:22,401 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:10:34] 2025-06-04 23:10:22,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:10:34] 2025-06-04 23:10:22,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:10:34] 2025-06-04 23:10:22,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:10:34] 2025-06-04 23:10:22,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:10:34] 2025-06-04 23:10:22,611 | INFO     | all data control threads have been joined
[2025-06-04 19:10:34] 2025-06-04 23:10:22,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:10:34] 2025-06-04 23:10:22,703 | INFO     | aborting loop
[2025-06-04 19:10:34] 2025-06-04 23:10:23,406 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:23,584 | INFO     | [job] validate thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:23,584 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:23,617 | INFO     | [data] control thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:23,641 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:23,709 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:23,739 | INFO     | all payload control threads have been joined
[2025-06-04 19:10:34] 2025-06-04 23:10:23,846 | INFO     | all job control threads have been joined
[2025-06-04 19:10:34] 2025-06-04 23:10:24,086 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,346 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,373 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,402 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,523 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,745 | INFO     | [payload] control thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,852 | INFO     | [job] control thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:24,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:10:34] 2025-06-04 23:10:25,870 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:26,408 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:10:34] 2025-06-04 23:10:27,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717375108928)>', '<ExcThread(monitor, started 140716944647936)>']
[2025-06-04 19:10:34] 2025-06-04 23:10:28,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:10:34] 2025-06-04 23:10:28,432 | INFO     | [monitor] control thread has ended
[2025-06-04 19:10:34] 2025-06-04 23:10:32,862 | INFO     | all workflow threads have been joined
[2025-06-04 19:10:34] 2025-06-04 23:10:32,862 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:10:34] 2025-06-04 23:10:32,862 | INFO     | traces error code: 0
[2025-06-04 19:10:34] 2025-06-04 23:10:32,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:10:34] 2025-06-04 23:10:32,979 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:10:34] 2025-06-04 23:10:32,986 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:10:34] 2025-06-04 23:10:32,991 [wrapper] pilotpid: 19900
[2025-06-04 19:10:34] 2025-06-04 23:10:32,995 [wrapper] Pilot exit status: 0
[2025-06-04 19:10:34] 2025-06-04 23:10:33,043 [wrapper] pandaids: 6668327129
[2025-06-04 19:10:34] 2025-06-04 23:10:33,396 [wrapper] cleanup supervisor_pilot 18824 19901
[2025-06-04 19:10:34] 2025-06-04 23:10:33,430 [wrapper] Test setup, not cleaning
[2025-06-04 19:10:34] 2025-06-04 23:10:33,470 [wrapper] apfmon messages muted
[2025-06-04 19:10:34] 2025-06-04 23:10:33,483 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:10:34] 2025-06-04 23:10:33,523 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:10:34]  *** Error codes and diagnostics ***
[2025-06-04 19:10:34]     "exeErrorCode": 0,
[2025-06-04 19:10:34]     "exeErrorDiag": "",
[2025-06-04 19:10:34]     "pilotErrorCode": 0,
[2025-06-04 19:10:34]     "pilotErrorDiag": "",
[2025-06-04 19:10:34]  *** Listing of results directory ***
[2025-06-04 19:10:34] total 418380
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas      5111 May 28 06:53 queuedata.json
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas    495897 May 28 06:54 pilot3.tar.gz
[2025-06-04 19:10:34] -rwx------ 1 boincer umatlas     37140 May 28 06:54 runpilot2-wrapper.sh
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas       100 Jun  4 13:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:10:34] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 13:03 run_atlas
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas       105 Jun  4 13:03 job.xml
[2025-06-04 19:10:34] -rw-r--r-- 2 boincer umatlas 222868551 Jun  4 13:03 EVNT.44871834._003248.pool.root.1
[2025-06-04 19:10:34] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 13:03 start_atlas.sh
[2025-06-04 19:10:34] drwxrwx--x 2 boincer umatlas      4096 Jun  4 13:03 shared
[2025-06-04 19:10:34] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 13:03 input.tar.gz
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas         0 Jun  4 13:03 boinc_lockfile
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 13:03 pandaJob.out
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas    990984 Jun  4 13:03 agis_schedconf.cvmfs.json
[2025-06-04 19:10:34] drwx------ 4 boincer umatlas      4096 Jun  4 13:03 pilot3
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas      6227 Jun  4 19:04 init_data.xml
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas 197040155 Jun  4 19:09 HITS.44871837._083217.pool.root.1
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas       531 Jun  4 19:09 boinc_task_state.xml
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas        95 Jun  4 19:09 pilot_heartbeat.json
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas      1060 Jun  4 19:09 memory_monitor_summary.json
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas   1598969 Jun  4 19:09 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas    506308 Jun  4 19:09 log.44871837._083217.job.log.tgz.1
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas      7753 Jun  4 19:10 heartbeat.json
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 19:10 boinc_mmap_file
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas        28 Jun  4 19:10 wrapper_checkpoint.txt
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas      4869 Jun  4 19:10 pilotlog.txt
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas   1832026 Jun  4 19:10 log.44871837._083217.job.log.1
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas       357 Jun  4 19:10 output.list
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas       620 Jun  4 19:10 runtime_log
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas   2355200 Jun  4 19:10 result.tar.gz
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas       661 Jun  4 19:10 vu4LDm5bTe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgybKDmoX1QQo.diag
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas      8657 Jun  4 19:10 runtime_log.err
[2025-06-04 19:10:34] -rw-r--r-- 1 boincer umatlas     21010 Jun  4 19:10 stderr.txt
[2025-06-04 19:10:34] HITS file was successfully produced:
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas 197040155 Jun  4 19:09 shared/HITS.pool.root.1
[2025-06-04 19:10:34]  *** Contents of shared directory: ***
[2025-06-04 19:10:34] total 412896
[2025-06-04 19:10:34] -rw-r--r-- 2 boincer umatlas 222868551 Jun  4 13:03 ATLAS.root_0
[2025-06-04 19:10:34] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 13:03 start_atlas.sh
[2025-06-04 19:10:34] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 13:03 input.tar.gz
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas 197040155 Jun  4 19:09 HITS.pool.root.1
[2025-06-04 19:10:34] -rw------- 1 boincer umatlas   2355200 Jun  4 19:10 result.tar.gz
19:10:36 (12093): run_atlas exited; CPU time 68664.968170
19:10:36 (12093): called boinc_finish(0)

</stderr_txt>
]]>

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