Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:59:11 (55561): wrapper (7.7.26015): starting
12:59:11 (55561): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:59:11] Arguments: --nthreads 8
[2025-06-04 12:59:11] Threads: 8
[2025-06-04 12:59:11] Checking for CVMFS
[2025-06-04 12:59:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:59:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:59:12] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:59:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:59:12] 2.11.2.0 10304 12918 334384 146788 1 589 14374297 18432000 13224 130560 0 112315016 99.315 151741485 51057 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 12:59:12] CVMFS is ok
[2025-06-04 12:59:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:59:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:59:12] Further information can be found at the LHC@home message board.
[2025-06-04 12:59:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:59:12] Checking for apptainer binary...
[2025-06-04 12:59:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:59:12] Running /usr/bin/apptainer --version
[2025-06-04 12:59:12] apptainer version 1.3.2-1.el7
[2025-06-04 12:59:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:59:12] c-212-11.aglt2.org
[2025-06-04 12:59:12] apptainer works
[2025-06-04 12:59:12] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:59:12] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:59:12] Starting ATLAS job with PandaID=6667923992
[2025-06-04 12:59:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:27:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:27:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:27:31]  is_altstaged=None
[2025-06-04 14:27:31]  is_tar=False
[2025-06-04 14:27:31]  lfn=log.44871837._078178.job.log.tgz.1
[2025-06-04 14:27:31]  mtime=0
[2025-06-04 14:27:31]  protocol_id=None
[2025-06-04 14:27:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:27:31]  replicas=None
[2025-06-04 14:27:31]  scope=mc23_13p6TeV
[2025-06-04 14:27:31]  status=None
[2025-06-04 14:27:31]  status_code=0
[2025-06-04 14:27:31]  storage_token=
[2025-06-04 14:27:31]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6667923992/log.44871837._078178.job.log.tgz.1
[2025-06-04 14:27:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/23/log.44871837._078178.job.log.tgz.1
[2025-06-04 14:27:31]  workdir=None
[2025-06-04 14:27:31] ]
[2025-06-04 14:27:31] 2025-06-04 18:27:12,027 | INFO     | transferring file log.44871837._078178.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6667923992/log.44871837._078178.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:27:31] 2025-06-04 18:27:12,028 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6667923992/log.44871837._078178.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._078178.job
[2025-06-04 14:27:31] 2025-06-04 18:27:12,044 | INFO     | adding to output.list: log.44871837._078178.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/23/log.44871837._078178.job.log.tg
[2025-06-04 14:27:31] 2025-06-04 18:27:12,045 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:27:31] 2025-06-04 18:27:12,045 | INFO     | summary of transferred files:
[2025-06-04 14:27:31] 2025-06-04 18:27:12,045 | INFO     |  -- lfn=log.44871837._078178.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:27:31] 2025-06-04 18:27:12,045 | INFO     | stage-out finished correctly
[2025-06-04 14:27:31] 2025-06-04 18:27:14,485 | WARNING  | process 72409 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:27:31] 2025-06-04 18:27:14,485 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667923992/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:27:31] 2025-06-04 18:27:14,608 | INFO     | number of running child processes to parent process 72409: 1
[2025-06-04 14:27:31] 2025-06-04 18:27:14,608 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:27:31] 2025-06-04 18:27:15,246 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:27:31] 2025-06-04 18:27:15,354 | INFO     | PID=59229 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 14:27:31] 2025-06-04 18:27:15,354 | INFO     | .. there are 20 such processes running
[2025-06-04 14:27:31] 2025-06-04 18:27:16,938 | INFO     | job 6667923992 has state=finished
[2025-06-04 14:27:31] 2025-06-04 18:27:16,938 | INFO     | preparing for final server update for job 6667923992 in state='finished'
[2025-06-04 14:27:31] 2025-06-04 18:27:16,939 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:27:31] 2025-06-04 18:27:16,939 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:27:31] 2025-06-04 18:27:16,939 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:27:31] 2025-06-04 18:27:16,939 | INFO     | job 6667923992 has finished - writing final server update
[2025-06-04 14:27:31] 2025-06-04 18:27:16,939 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:27:31] 2025-06-04 18:27:16,941 | INFO     | executing command: lscpu
[2025-06-04 14:27:31] 2025-06-04 18:27:16,967 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:27:31] 2025-06-04 18:27:17,111 | INFO     | monitor loop #398: job 0:6667923992 is in state 'finished'
[2025-06-04 14:27:31] 2025-06-04 18:27:17,111 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:27:31] 2025-06-04 18:27:18,976 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:27:31] 2025-06-04 18:27:18,977 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667923992/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:27:31] 2025-06-04 18:27:18,977 | INFO     | extracted standard info from prmon json
[2025-06-04 14:27:31] 2025-06-04 18:27:18,977 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:27:31] 2025-06-04 18:27:18,977 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:27:31] 2025-06-04 18:27:18,977 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:27:31] 2025-06-04 18:27:18,978 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:27:31] 2025-06-04 18:27:18,978 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | sum of deviations: -1252160603.0
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | mean x: 1749059067.0
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | mean y: 2518265.0
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | -- intersect: 14330149878.836634
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | intersect: 14330149878.836634
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | chi2: 0.015358414415334433
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | -- intersect: 14330149878.836634
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | current memory leak: -8.19 B/s (using 79 data points, chi2=0.02)
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | ..............................
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . Timing measurements:
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . get job = 0 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . initial setup = 2 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . payload setup = 4 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . stage-in = 0 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . payload execution = 5249 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . stage-out = 0 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | . log creation = 0 s
[2025-06-04 14:27:31] 2025-06-04 18:27:18,979 | INFO     | ..............................
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | 
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | job summary report
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | --------------------------------------------------
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | PanDA job id: 6667923992
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | task id: 44871837
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | errors: (none)
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:27:31] 2025-06-04 18:27:19,440 | INFO     | pilot state: finished 
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | transexitcode: 0
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | exeerrorcode: 0
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | exeerrordiag: 
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | exitcode: 0
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | exitmsg: OK
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | cpuconsumptiontime: 37834 s
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | nevents: 400
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | neventsw: 0
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | pid: 72409
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | pgrp: 72409
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | corecount: 8
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | event service: False
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | sizes: {0: 2397392, 4: 2397598, 11: 2397626, 5257: 2433052, 5261: 2433052, 5264: 2433222}
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | --------------------------------------------------
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | 
[2025-06-04 14:27:31] 2025-06-04 18:27:19,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,451 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:27:31] 2025-06-04 18:27:19,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:27:31] 2025-06-04 18:27:19,452 | INFO     | job 6667923992 has completed (purged errors)
[2025-06-04 14:27:31] 2025-06-04 18:27:19,452 | INFO     | overall cleanup function is called
[2025-06-04 14:27:31] 2025-06-04 18:27:20,458 | INFO     | --- collectZombieJob: --- 10, [72409]
[2025-06-04 14:27:31] 2025-06-04 18:27:20,459 | INFO     | zombie collector waiting for pid 72409
[2025-06-04 14:27:31] 2025-06-04 18:27:20,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:27:31] 2025-06-04 18:27:20,459 | INFO     | collected zombie processes
[2025-06-04 14:27:31] 2025-06-04 18:27:20,459 | INFO     | will attempt to kill all subprocesses of pid=72409
[2025-06-04 14:27:31] 2025-06-04 18:27:20,590 | INFO     | process IDs to be killed: [72409] (in reverse order)
[2025-06-04 14:27:31] 2025-06-04 18:27:20,654 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:27:31] 2025-06-04 18:27:20,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:27:31] 2025-06-04 18:27:20,662 | INFO     | did not find any defunct processes belonging to 72409
[2025-06-04 14:27:31] 2025-06-04 18:27:20,668 | INFO     | did not find any defunct processes belonging to 72409
[2025-06-04 14:27:31] 2025-06-04 18:27:20,668 | INFO     | ready for new job
[2025-06-04 14:27:31] 2025-06-04 18:27:20,668 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:27:31] 2025-06-04 18:27:20,669 | INFO     | **************************************
[2025-06-04 14:27:31] 2025-06-04 18:27:20,670 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:27:31] 2025-06-04 18:27:20,670 | INFO     | **************************************
[2025-06-04 14:27:31] 2025-06-04 18:27:20,670 | INFO     | 
[2025-06-04 14:27:31] 2025-06-04 18:27:20,673 | INFO     | architecture information:
[2025-06-04 14:27:31] 2025-06-04 18:27:20,673 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:27:31] 2025-06-04 18:27:20,683 | INFO     | cat /etc/os-release:
[2025-06-04 14:27:31] NAME="CentOS Linux"
[2025-06-04 14:27:31] VERSION="7 (Core)"
[2025-06-04 14:27:31] ID="centos"
[2025-06-04 14:27:31] ID_LIKE="rhel fedora"
[2025-06-04 14:27:31] VERSION_ID="7"
[2025-06-04 14:27:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:27:31] ANSI_COLOR="0;31"
[2025-06-04 14:27:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:27:31] HOME_URL="https://www.centos.org/"
[2025-06-04 14:27:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:27:31] 
[2025-06-04 14:27:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:27:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:27:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:27:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:27:31] 
[2025-06-04 14:27:31] 2025-06-04 18:27:20,683 | INFO     | **************************************
[2025-06-04 14:27:31] 2025-06-04 18:27:21,185 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 14:27:31] 2025-06-04 18:27:21,199 | INFO     | sufficient remaining disk space (106240671744 B)
[2025-06-04 14:27:31] 2025-06-04 18:27:21,199 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:27:31] 2025-06-04 18:27:21,199 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:27:31] 2025-06-04 18:27:21,199 | INFO     | update_server=False
[2025-06-04 14:27:31] 2025-06-04 18:27:21,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:27:31] 2025-06-04 18:27:21,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:27:31] 2025-06-04 18:27:21,200 | INFO     | aborting loop
[2025-06-04 14:27:31] 2025-06-04 18:27:21,285 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:27:31] 2025-06-04 18:27:21,368 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:27:31] 2025-06-04 18:27:21,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:27:31] 2025-06-04 18:27:21,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:27:31] 2025-06-04 18:27:21,447 | INFO     | all data control threads have been joined
[2025-06-04 14:27:31] 2025-06-04 18:27:21,664 | INFO     | all payload control threads have been joined
[2025-06-04 14:27:31] 2025-06-04 18:27:22,204 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:22,205 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:22,237 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:22,452 | INFO     | [data] control thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:22,576 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:22,604 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:27:31] 2025-06-04 18:27:22,669 | INFO     | [payload] control thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:22,677 | INFO     | all job control threads have been joined
[2025-06-04 14:27:31] 2025-06-04 18:27:22,820 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:23,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:23,456 | INFO     | [job] validate thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:23,526 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:23,538 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:23,680 | INFO     | [job] control thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:23,699 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:24,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:27:31] 2025-06-04 18:27:24,610 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:25,028 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:25,290 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:27:31] 2025-06-04 18:27:25,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943400404800)>', '<ExcThread(monitor, started 139942952941312)>']
[2025-06-04 14:27:31] 2025-06-04 18:27:26,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:27:31] 2025-06-04 18:27:26,386 | INFO     | [monitor] control thread has ended
[2025-06-04 14:27:31] 2025-06-04 18:27:30,853 | INFO     | all workflow threads have been joined
[2025-06-04 14:27:31] 2025-06-04 18:27:30,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:27:31] 2025-06-04 18:27:30,854 | INFO     | traces error code: 0
[2025-06-04 14:27:31] 2025-06-04 18:27:30,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:27:31] 2025-06-04 18:27:30,904 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:27:31] 2025-06-04 18:27:30,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:27:31] 2025-06-04 18:27:30,908 [wrapper] pilotpid: 59229
[2025-06-04 14:27:31] 2025-06-04 18:27:30,909 [wrapper] Pilot exit status: 0
[2025-06-04 14:27:31] 2025-06-04 18:27:30,915 [wrapper] pandaids: 6667923992
[2025-06-04 14:27:31] 2025-06-04 18:27:30,956 [wrapper] cleanup supervisor_pilot 90835 59230
[2025-06-04 14:27:31] 2025-06-04 18:27:30,958 [wrapper] Test setup, not cleaning
[2025-06-04 14:27:31] 2025-06-04 18:27:30,960 [wrapper] apfmon messages muted
[2025-06-04 14:27:31] 2025-06-04 18:27:30,961 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:27:31] 2025-06-04 18:27:30,962 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:27:31]  *** Error codes and diagnostics ***
[2025-06-04 14:27:31]     "exeErrorCode": 0,
[2025-06-04 14:27:31]     "exeErrorDiag": "",
[2025-06-04 14:27:31]     "pilotErrorCode": 0,
[2025-06-04 14:27:31]     "pilotErrorDiag": "",
[2025-06-04 14:27:31]  *** Listing of results directory ***
[2025-06-04 14:27:31] total 421412
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas      5111 May 27 23:50 queuedata.json
[2025-06-04 14:27:31] -rwx------ 1 boincer umatlas     37140 May 27 23:54 runpilot2-wrapper.sh
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas       100 Jun  4 12:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:27:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 12:59 run_atlas
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas       105 Jun  4 12:59 job.xml
[2025-06-04 14:27:31] -rw-r--r-- 2 boincer umatlas 223410783 Jun  4 12:59 EVNT.44871834._003056.pool.root.1
[2025-06-04 14:27:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:59 start_atlas.sh
[2025-06-04 14:27:31] drwxrwx--x 2 boincer umatlas      4096 Jun  4 12:59 shared
[2025-06-04 14:27:31] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 12:59 input.tar.gz
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas         0 Jun  4 12:59 boinc_lockfile
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 12:59 pandaJob.out
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas    990984 Jun  4 12:59 agis_schedconf.cvmfs.json
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas   1598969 Jun  4 12:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:27:31] drwx------ 4 boincer umatlas      4096 Jun  4 12:59 pilot3
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 14:22 init_data.xml
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas 202618777 Jun  4 14:26 HITS.44871837._078178.pool.root.1
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas       529 Jun  4 14:26 boinc_task_state.xml
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas      1074 Jun  4 14:27 memory_monitor_summary.json
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas    312087 Jun  4 14:27 log.44871837._078178.job.log.tgz.1
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 14:27 boinc_mmap_file
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas        27 Jun  4 14:27 wrapper_checkpoint.txt
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas      7740 Jun  4 14:27 heartbeat.json
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas        95 Jun  4 14:27 pilot_heartbeat.json
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas      4354 Jun  4 14:27 pilotlog.txt
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas    515520 Jun  4 14:27 log.44871837._078178.job.log.1
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas       357 Jun  4 14:27 output.list
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas       620 Jun  4 14:27 runtime_log
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas    849920 Jun  4 14:27 result.tar.gz
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 14:27 runtime_log.err
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas       658 Jun  4 14:27 OqVMDmN3Me7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0AbKDmjPkGNm.diag
[2025-06-04 14:27:31] -rw-r--r-- 1 boincer umatlas     21397 Jun  4 14:27 stderr.txt
[2025-06-04 14:27:31] HITS file was successfully produced:
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas 202618777 Jun  4 14:26 shared/HITS.pool.root.1
[2025-06-04 14:27:31]  *** Contents of shared directory: ***
[2025-06-04 14:27:31] total 417404
[2025-06-04 14:27:31] -rw-r--r-- 2 boincer umatlas 223410783 Jun  4 12:59 ATLAS.root_0
[2025-06-04 14:27:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:59 start_atlas.sh
[2025-06-04 14:27:31] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 12:59 input.tar.gz
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas 202618777 Jun  4 14:26 HITS.pool.root.1
[2025-06-04 14:27:31] -rw------- 1 boincer umatlas    849920 Jun  4 14:27 result.tar.gz
14:27:33 (55561): run_atlas exited; CPU time 37734.581839
14:27:33 (55561): called boinc_finish(0)

</stderr_txt>
]]>

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