Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:59:03 (3344672): wrapper (7.7.26015): starting
12:59:03 (3344672): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 12:59:03] Arguments: --nthreads 12
[2025-06-04 12:59:03] Threads: 12
[2025-06-04 12:59:03] Checking for CVMFS
[2025-06-04 12:59:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:59:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:59:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:59:03] 2.12.6.0 6469 1091 143364 146788 1 281 16658290 32935937 7612 16776704 0 5694288 99.593 4884872 34394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 12:59:03] CVMFS is ok
[2025-06-04 12:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:59:03] Further information can be found at the LHC@home message board.
[2025-06-04 12:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:59:03] Checking for apptainer binary...
[2025-06-04 12:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:59:03] Running /usr/bin/apptainer --version
[2025-06-04 12:59:03] apptainer version 1.4.1-1.el9
[2025-06-04 12:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:59:03] c6-1-26-3.aglt2.org
[2025-06-04 12:59:03] apptainer works
[2025-06-04 12:59:03] Set ATHENA_PROC_NUMBER=12
[2025-06-04 12:59:03] Set ATHENA_CORE_NUMBER=12
[2025-06-04 12:59:04] Starting ATLAS job with PandaID=6668051289
[2025-06-04 12:59:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:05:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:05:27]  lfn=log.44871837._079352.job.log.tgz.1
[2025-06-04 14:05:27]  mtime=0
[2025-06-04 14:05:27]  protocol_id=None
[2025-06-04 14:05:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:05:27]  replicas=None
[2025-06-04 14:05:27]  scope=mc23_13p6TeV
[2025-06-04 14:05:27]  status=None
[2025-06-04 14:05:27]  status_code=0
[2025-06-04 14:05:27]  storage_token=
[2025-06-04 14:05:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6668051289/log.44871837._079352.job.log.tgz.1
[2025-06-04 14:05:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/65/log.44871837._079352.job.log.tgz.1
[2025-06-04 14:05:27]  workdir=None
[2025-06-04 14:05:27] ]
[2025-06-04 14:05:27] 2025-06-04 18:05:07,653 | INFO     | transferring file log.44871837._079352.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6668051289/log.44871837._079352.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:05:27] 2025-06-04 18:05:07,653 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668051289/log.44871837._079352.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._079352.job
[2025-06-04 14:05:27] 2025-06-04 18:05:07,671 | INFO     | adding to output.list: log.44871837._079352.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/65/log.44871837._079352.job.log.tg
[2025-06-04 14:05:27] 2025-06-04 18:05:07,672 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:05:27] 2025-06-04 18:05:07,672 | INFO     | summary of transferred files:
[2025-06-04 14:05:27] 2025-06-04 18:05:07,672 | INFO     |  -- lfn=log.44871837._079352.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:05:27] 2025-06-04 18:05:07,672 | INFO     | stage-out finished correctly
[2025-06-04 14:05:27] 2025-06-04 18:05:08,923 | INFO     | monitor loop #298: job 0:6668051289 is in state 'finished'
[2025-06-04 14:05:27] 2025-06-04 18:05:08,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:05:27] 2025-06-04 18:05:09,969 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:05:27] 2025-06-04 18:05:10,056 | INFO     | job 6668051289 has state=finished
[2025-06-04 14:05:27] 2025-06-04 18:05:10,057 | INFO     | preparing for final server update for job 6668051289 in state='finished'
[2025-06-04 14:05:27] 2025-06-04 18:05:10,057 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:05:27] 2025-06-04 18:05:10,057 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:05:27] 2025-06-04 18:05:10,057 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:05:27] 2025-06-04 18:05:10,058 | INFO     | job 6668051289 has finished - writing final server update
[2025-06-04 14:05:27] 2025-06-04 18:05:10,058 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:05:27] 2025-06-04 18:05:10,074 | INFO     | executing command: lscpu
[2025-06-04 14:05:27] 2025-06-04 18:05:10,147 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:05:27] 2025-06-04 18:05:11,272 | INFO     | PID=3348326 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 14:05:27] 2025-06-04 18:05:11,273 | INFO     | .. there are 8 such processes running
[2025-06-04 14:05:27] 2025-06-04 18:05:11,426 | INFO     | monitor loop #299: job 0:6668051289 is in state 'finished'
[2025-06-04 14:05:27] 2025-06-04 18:05:11,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:05:27] 2025-06-04 18:05:13,929 | INFO     | monitor loop #300: job 0:6668051289 is in state 'finished'
[2025-06-04 14:05:27] 2025-06-04 18:05:13,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:05:27] 2025-06-04 18:05:13,987 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 14:05:27] 2025-06-04 18:05:13,987 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668051289/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:05:27] 2025-06-04 18:05:13,988 | INFO     | extracted standard info from prmon json
[2025-06-04 14:05:27] 2025-06-04 18:05:13,988 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:05:27] 2025-06-04 18:05:13,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:05:27] 2025-06-04 18:05:13,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:05:27] 2025-06-04 18:05:13,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | sum of deviations: -5433320782.5
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | mean x: 1749058422.5
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | mean y: 2488509.8103448274
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | -- intersect: 157124263900.34454
[2025-06-04 14:05:27] 2025-06-04 18:05:13,990 | INFO     | intersect: 157124263900.34454
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | chi2: 0.12260455837382847
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | -- intersect: 157124263900.34454
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | current memory leak: -89.83 B/s (using 58 data points, chi2=0.12)
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | ..............................
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | . Timing measurements:
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | . get job = 0 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | . initial setup = 2 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | . payload setup = 6 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,991 | INFO     | . stage-in = 0 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,992 | INFO     | . payload execution = 3927 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,992 | INFO     | . stage-out = 0 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,992 | INFO     | . log creation = 0 s
[2025-06-04 14:05:27] 2025-06-04 18:05:13,992 | INFO     | ..............................
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | 
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | job summary report
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | --------------------------------------------------
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | PanDA job id: 6668051289
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | task id: 44871837
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | errors: (none)
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | pilot state: finished 
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | transexitcode: 0
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | exeerrorcode: 0
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | exeerrordiag: 
[2025-06-04 14:05:27] 2025-06-04 18:05:14,074 | INFO     | exitcode: 0
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | exitmsg: OK
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | cpuconsumptiontime: 42652 s
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | nevents: 400
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | neventsw: 0
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | pid: 3355370
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | pgrp: 3355370
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | corecount: 12
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | event service: False
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | sizes: {0: 2397159, 1: 2397414, 5: 2397620, 12: 2397676, 3938: 2423446, 3939: 2432387, 3941: 2432571, 3945: 2432741}
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | --------------------------------------------------
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | 
[2025-06-04 14:05:27] 2025-06-04 18:05:14,075 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:05:27] 2025-06-04 18:05:14,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | job 6668051289 has completed (purged errors)
[2025-06-04 14:05:27] 2025-06-04 18:05:14,095 | INFO     | overall cleanup function is called
[2025-06-04 14:05:27] 2025-06-04 18:05:15,099 | INFO     | --- collectZombieJob: --- 10, [3355370]
[2025-06-04 14:05:27] 2025-06-04 18:05:15,099 | INFO     | zombie collector waiting for pid 3355370
[2025-06-04 14:05:27] 2025-06-04 18:05:15,099 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:05:27] 2025-06-04 18:05:15,099 | INFO     | collected zombie processes
[2025-06-04 14:05:27] 2025-06-04 18:05:15,099 | INFO     | will attempt to kill all subprocesses of pid=3355370
[2025-06-04 14:05:27] 2025-06-04 18:05:15,314 | INFO     | process IDs to be killed: [3355370] (in reverse order)
[2025-06-04 14:05:27] 2025-06-04 18:05:15,390 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:05:27] 2025-06-04 18:05:15,391 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:05:27] 2025-06-04 18:05:15,400 | INFO     | did not find any defunct processes belonging to 3355370
[2025-06-04 14:05:27] 2025-06-04 18:05:15,409 | INFO     | did not find any defunct processes belonging to 3355370
[2025-06-04 14:05:27] 2025-06-04 18:05:15,409 | INFO     | ready for new job
[2025-06-04 14:05:27] 2025-06-04 18:05:15,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:05:27] 2025-06-04 18:05:15,411 | INFO     | **************************************
[2025-06-04 14:05:27] 2025-06-04 18:05:15,411 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:05:27] 2025-06-04 18:05:15,411 | INFO     | **************************************
[2025-06-04 14:05:27] 2025-06-04 18:05:15,411 | INFO     | 
[2025-06-04 14:05:27] 2025-06-04 18:05:15,428 | INFO     | architecture information:
[2025-06-04 14:05:27] 2025-06-04 18:05:15,428 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:05:27] 2025-06-04 18:05:15,443 | INFO     | cat /etc/os-release:
[2025-06-04 14:05:27] NAME="CentOS Linux"
[2025-06-04 14:05:27] VERSION="7 (Core)"
[2025-06-04 14:05:27] ID="centos"
[2025-06-04 14:05:27] ID_LIKE="rhel fedora"
[2025-06-04 14:05:27] VERSION_ID="7"
[2025-06-04 14:05:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:05:27] ANSI_COLOR="0;31"
[2025-06-04 14:05:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:05:27] HOME_URL="https://www.centos.org/"
[2025-06-04 14:05:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:05:27] 
[2025-06-04 14:05:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:05:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:05:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:05:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:05:27] 
[2025-06-04 14:05:27] 2025-06-04 18:05:15,443 | INFO     | **************************************
[2025-06-04 14:05:27] 2025-06-04 18:05:15,946 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:05:27] 2025-06-04 18:05:15,962 | INFO     | sufficient remaining disk space (76478939136 B)
[2025-06-04 14:05:27] 2025-06-04 18:05:15,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:05:27] 2025-06-04 18:05:15,963 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:05:27] 2025-06-04 18:05:15,963 | INFO     | update_server=False
[2025-06-04 14:05:27] 2025-06-04 18:05:15,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:05:27] 2025-06-04 18:05:15,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:05:27] 2025-06-04 18:05:15,966 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:05:27] 2025-06-04 18:05:15,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:05:27] 2025-06-04 18:05:15,968 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:05:27] 2025-06-04 18:05:15,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:05:27] 2025-06-04 18:05:15,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:05:27] 2025-06-04 18:05:16,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:05:27] 2025-06-04 18:05:16,283 | INFO     | all data control threads have been joined
[2025-06-04 14:05:27] 2025-06-04 18:05:16,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 14:05:27] 2025-06-04 18:05:16,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 14:05:27] 2025-06-04 18:05:16,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:05:27] 2025-06-04 18:05:16,432 | INFO     | will abort loop
[2025-06-04 14:05:27] 2025-06-04 18:05:16,919 | INFO     | all payload control threads have been joined
[2025-06-04 14:05:27] 2025-06-04 18:05:16,968 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:16,972 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,019 | INFO     | all job control threads have been joined
[2025-06-04 14:05:27] 2025-06-04 18:05:17,176 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,278 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,289 | INFO     | [data] control thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,398 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,426 | INFO     | [job] validate thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,438 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,588 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,677 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,869 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,924 | INFO     | [payload] control thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:17,973 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:18,024 | INFO     | [job] control thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:18,084 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:20,066 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:05:27] 2025-06-04 18:05:21,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639683991360)>', '<ExcThread(monitor, started 140638897039104)>']
[2025-06-04 14:05:27] 2025-06-04 18:05:21,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:05:27] 2025-06-04 18:05:21,996 | INFO     | [monitor] control thread has ended
[2025-06-04 14:05:27] 2025-06-04 18:05:26,775 | INFO     | all workflow threads have been joined
[2025-06-04 14:05:27] 2025-06-04 18:05:26,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:05:27] 2025-06-04 18:05:26,776 | INFO     | traces error code: 0
[2025-06-04 14:05:27] 2025-06-04 18:05:26,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:05:27] 2025-06-04 18:05:26,944 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:05:27] 2025-06-04 18:05:26,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:05:27] 2025-06-04 18:05:26,950 [wrapper] pilotpid: 3348326
[2025-06-04 14:05:27] 2025-06-04 18:05:26,953 [wrapper] Pilot exit status: 0
[2025-06-04 14:05:27] 2025-06-04 18:05:26,964 [wrapper] pandaids: 6668051289
[2025-06-04 14:05:27] 2025-06-04 18:05:27,017 [wrapper] cleanup supervisor_pilot 3479691 3348327
[2025-06-04 14:05:27] 2025-06-04 18:05:27,020 [wrapper] Test setup, not cleaning
[2025-06-04 14:05:27] 2025-06-04 18:05:27,023 [wrapper] apfmon messages muted
[2025-06-04 14:05:27] 2025-06-04 18:05:27,025 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:05:27] 2025-06-04 18:05:27,027 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:05:27]  *** Error codes and diagnostics ***
[2025-06-04 14:05:27]     "exeErrorCode": 0,
[2025-06-04 14:05:27]     "exeErrorDiag": "",
[2025-06-04 14:05:27]     "pilotErrorCode": 0,
[2025-06-04 14:05:27]     "pilotErrorDiag": "",
[2025-06-04 14:05:27]  *** Listing of results directory ***
[2025-06-04 14:05:27] total 417724
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas      5111 May 28 01:30 queuedata.json
[2025-06-04 14:05:27] -rwx------. 1 boincer umatlas     37140 May 28 01:32 runpilot2-wrapper.sh
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas       100 Jun  4 12:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:05:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 12:59 run_atlas
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas       105 Jun  4 12:59 job.xml
[2025-06-04 14:05:27] -rw-r--r--. 2 boincer umatlas 225340949 Jun  4 12:59 EVNT.44871834._003102.pool.root.1
[2025-06-04 14:05:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:59 start_atlas.sh
[2025-06-04 14:05:27] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 12:59 shared
[2025-06-04 14:05:27] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 12:59 input.tar.gz
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas         0 Jun  4 12:59 boinc_lockfile
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas      2556 Jun  4 12:59 pandaJob.out
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas    990984 Jun  4 12:59 agis_schedconf.cvmfs.json
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas   1598969 Jun  4 12:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:05:27] drwx------. 4 boincer umatlas      4096 Jun  4 12:59 pilot3
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 14:04 init_data.xml
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas 197079420 Jun  4 14:04 HITS.44871837._079352.pool.root.1
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas       529 Jun  4 14:04 boinc_task_state.xml
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas      1034 Jun  4 14:05 memory_monitor_summary.json
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas    341925 Jun  4 14:05 log.44871837._079352.job.log.tgz.1
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas      7716 Jun  4 14:05 heartbeat.json
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas        95 Jun  4 14:05 pilot_heartbeat.json
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:05 boinc_mmap_file
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas        27 Jun  4 14:05 wrapper_checkpoint.txt
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas      4662 Jun  4 14:05 pilotlog.txt
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas    402520 Jun  4 14:05 log.44871837._079352.job.log.1
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas       357 Jun  4 14:05 output.list
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:05 runtime_log
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas    768000 Jun  4 14:05 result.tar.gz
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas       654 Jun  4 14:05 VWDMDm5ZOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvLbKDmpSeIKo.diag
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 14:05 runtime_log.err
[2025-06-04 14:05:27] -rw-r--r--. 1 boincer umatlas     21678 Jun  4 14:05 stderr.txt
[2025-06-04 14:05:27] HITS file was successfully produced:
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas 197079420 Jun  4 14:04 shared/HITS.pool.root.1
[2025-06-04 14:05:27]  *** Contents of shared directory: ***
[2025-06-04 14:05:27] total 413796
[2025-06-04 14:05:27] -rw-r--r--. 2 boincer umatlas 225340949 Jun  4 12:59 ATLAS.root_0
[2025-06-04 14:05:27] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:59 start_atlas.sh
[2025-06-04 14:05:27] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 12:59 input.tar.gz
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas 197079420 Jun  4 14:04 HITS.pool.root.1
[2025-06-04 14:05:27] -rw-------. 1 boincer umatlas    768000 Jun  4 14:05 result.tar.gz
14:05:28 (3344672): run_atlas exited; CPU time 42697.935844
14:05:28 (3344672): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN