Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:48:17 (553541): wrapper (7.7.26015): starting
13:48:17 (553541): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 13:48:17] Arguments: --nthreads 12
[2025-06-04 13:48:17] Threads: 12
[2025-06-04 13:48:17] Checking for CVMFS
[2025-06-04 13:48:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:48:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:48:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:48:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:48:17] 2.12.6.0 5109 31823 446612 146789 3 141 19289456 32935937 5923 16776704 0 125280205 99.671 110869380 32509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 13:48:17] CVMFS is ok
[2025-06-04 13:48:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:48:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:48:17] Further information can be found at the LHC@home message board.
[2025-06-04 13:48:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:48:17] Checking for apptainer binary...
[2025-06-04 13:48:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:48:17] Running /usr/bin/apptainer --version
[2025-06-04 13:48:17] apptainer version 1.4.1-1.el9
[2025-06-04 13:48:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:48:17] c6-2-29-2.aglt2.org
[2025-06-04 13:48:17] apptainer works
[2025-06-04 13:48:17] Set ATHENA_PROC_NUMBER=12
[2025-06-04 13:48:17] Set ATHENA_CORE_NUMBER=12
[2025-06-04 13:48:17] Starting ATLAS job with PandaID=6667931105
[2025-06-04 13:48:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:36:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:36:36]  guid=b75b4cca-7ae4-4dc9-a754-51a196381250
[2025-06-04 14:36:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:36:36]  is_altstaged=None
[2025-06-04 14:36:36]  is_tar=False
[2025-06-04 14:36:36]  lfn=log.44871837._078798.job.log.tgz.1
[2025-06-04 14:36:36]  mtime=0
[2025-06-04 14:36:36]  protocol_id=None
[2025-06-04 14:36:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:36:36]  replicas=None
[2025-06-04 14:36:36]  scope=mc23_13p6TeV
[2025-06-04 14:36:36]  status=None
[2025-06-04 14:36:36]  status_code=0
[2025-06-04 14:36:36]  storage_token=
[2025-06-04 14:36:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667931105/log.44871837._078798.job.log.tgz.1
[2025-06-04 14:36:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/e3/log.44871837._078798.job.log.tgz.1
[2025-06-04 14:36:36]  workdir=None
[2025-06-04 14:36:36] ]
[2025-06-04 14:36:36] 2025-06-04 18:36:19,228 | INFO     | transferring file log.44871837._078798.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667931105/log.44871837._078798.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:36:36] 2025-06-04 18:36:19,229 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667931105/log.44871837._078798.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._078798.job
[2025-06-04 14:36:36] 2025-06-04 18:36:19,242 | INFO     | adding to output.list: log.44871837._078798.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/e3/log.44871837._078798.job.log.tg
[2025-06-04 14:36:36] 2025-06-04 18:36:19,242 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:36:36] 2025-06-04 18:36:19,242 | INFO     | summary of transferred files:
[2025-06-04 14:36:36] 2025-06-04 18:36:19,242 | INFO     |  -- lfn=log.44871837._078798.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:36:36] 2025-06-04 18:36:19,243 | INFO     | stage-out finished correctly
[2025-06-04 14:36:36] 2025-06-04 18:36:19,614 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:36:36] 2025-06-04 18:36:19,657 | INFO     | job 6667931105 has state=finished
[2025-06-04 14:36:36] 2025-06-04 18:36:19,657 | INFO     | preparing for final server update for job 6667931105 in state='finished'
[2025-06-04 14:36:36] 2025-06-04 18:36:19,657 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:36:36] 2025-06-04 18:36:19,657 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:36:36] 2025-06-04 18:36:19,657 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:36:36] 2025-06-04 18:36:19,657 | INFO     | job 6667931105 has finished - writing final server update
[2025-06-04 14:36:36] 2025-06-04 18:36:19,658 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:36:36] 2025-06-04 18:36:19,671 | INFO     | executing command: lscpu
[2025-06-04 14:36:36] 2025-06-04 18:36:19,728 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:36:36] 2025-06-04 18:36:22,077 | WARNING  | process 563771 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:36:36] 2025-06-04 18:36:22,077 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667931105/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:36:36] 2025-06-04 18:36:22,162 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 14:36:36] 2025-06-04 18:36:22,162 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667931105/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:36:36] 2025-06-04 18:36:22,163 | INFO     | extracted standard info from prmon json
[2025-06-04 14:36:36] 2025-06-04 18:36:22,163 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:36:36] 2025-06-04 18:36:22,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:36:36] 2025-06-04 18:36:22,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:36:36] 2025-06-04 18:36:22,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:36:36] 2025-06-04 18:36:22,164 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | sum of square deviations: 19832930.0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | sum of deviations: -3591434353.0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | mean x: 1749060819.5
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | mean y: 2504078.35
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | -- intersect: 316730144050.7914
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | intersect: 316730144050.7914
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | chi2: 0.0933296269559639
[2025-06-04 14:36:36] 2025-06-04 18:36:22,165 | INFO     | -- intersect: 316730144050.7914
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | current memory leak: -181.08 B/s (using 40 data points, chi2=0.09)
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | ..............................
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . Timing measurements:
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . get job = 0 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . initial setup = 2 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . payload setup = 3 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . stage-in = 0 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . payload execution = 2852 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,166 | INFO     | . stage-out = 0 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,167 | INFO     | . log creation = 0 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,167 | INFO     | ..............................
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | 
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | job summary report
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | --------------------------------------------------
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | PanDA job id: 6667931105
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | task id: 44871837
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | errors: (none)
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:36:36] 2025-06-04 18:36:22,214 | INFO     | pilot state: finished 
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | transexitcode: 0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | exeerrorcode: 0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | exeerrordiag: 
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | exitcode: 0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | exitmsg: OK
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | cpuconsumptiontime: 31036 s
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | nevents: 400
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | neventsw: 0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | pid: 563771
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | pgrp: 563771
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | corecount: 12
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | event service: False
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 2860: 2422930, 2861: 2431871, 2862: 2431927, 2864: 2432225}
[2025-06-04 14:36:36] 2025-06-04 18:36:22,215 | INFO     | --------------------------------------------------
[2025-06-04 14:36:36] 2025-06-04 18:36:22,216 | INFO     | 
[2025-06-04 14:36:36] 2025-06-04 18:36:22,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:36:36] 2025-06-04 18:36:22,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | job 6667931105 has completed (purged errors)
[2025-06-04 14:36:36] 2025-06-04 18:36:22,230 | INFO     | overall cleanup function is called
[2025-06-04 14:36:36] 2025-06-04 18:36:22,274 | INFO     | number of running child processes to parent process 563771: 1
[2025-06-04 14:36:36] 2025-06-04 18:36:22,274 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:36:36] 2025-06-04 18:36:22,274 | INFO     | aborting job monitoring since job object (job id=6667931105) has expired
[2025-06-04 14:36:36] 2025-06-04 18:36:23,237 | INFO     | --- collectZombieJob: --- 10, [563771]
[2025-06-04 14:36:36] 2025-06-04 18:36:23,237 | INFO     | zombie collector waiting for pid 563771
[2025-06-04 14:36:36] 2025-06-04 18:36:23,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:36:36] 2025-06-04 18:36:23,237 | INFO     | collected zombie processes
[2025-06-04 14:36:36] 2025-06-04 18:36:23,237 | INFO     | will attempt to kill all subprocesses of pid=563771
[2025-06-04 14:36:36] 2025-06-04 18:36:23,371 | INFO     | process IDs to be killed: [563771] (in reverse order)
[2025-06-04 14:36:36] 2025-06-04 18:36:23,419 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:36:36] 2025-06-04 18:36:23,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:36:36] 2025-06-04 18:36:23,426 | INFO     | did not find any defunct processes belonging to 563771
[2025-06-04 14:36:36] 2025-06-04 18:36:23,430 | INFO     | did not find any defunct processes belonging to 563771
[2025-06-04 14:36:36] 2025-06-04 18:36:23,431 | INFO     | ready for new job
[2025-06-04 14:36:36] 2025-06-04 18:36:23,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:36:36] 2025-06-04 18:36:23,432 | INFO     | **************************************
[2025-06-04 14:36:36] 2025-06-04 18:36:23,432 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:36:36] 2025-06-04 18:36:23,432 | INFO     | **************************************
[2025-06-04 14:36:36] 2025-06-04 18:36:23,432 | INFO     | 
[2025-06-04 14:36:36] 2025-06-04 18:36:23,447 | INFO     | architecture information:
[2025-06-04 14:36:36] 2025-06-04 18:36:23,447 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:36:36] 2025-06-04 18:36:23,456 | INFO     | cat /etc/os-release:
[2025-06-04 14:36:36] NAME="CentOS Linux"
[2025-06-04 14:36:36] VERSION="7 (Core)"
[2025-06-04 14:36:36] ID="centos"
[2025-06-04 14:36:36] ID_LIKE="rhel fedora"
[2025-06-04 14:36:36] VERSION_ID="7"
[2025-06-04 14:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:36:36] ANSI_COLOR="0;31"
[2025-06-04 14:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:36:36] HOME_URL="https://www.centos.org/"
[2025-06-04 14:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:36:36] 
[2025-06-04 14:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:36:36] 
[2025-06-04 14:36:36] 2025-06-04 18:36:23,456 | INFO     | **************************************
[2025-06-04 14:36:36] 2025-06-04 18:36:23,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:36:36] 2025-06-04 18:36:23,972 | INFO     | sufficient remaining disk space (76456919040 B)
[2025-06-04 14:36:36] 2025-06-04 18:36:23,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:36:36] 2025-06-04 18:36:23,973 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:36:36] 2025-06-04 18:36:23,973 | INFO     | update_server=False
[2025-06-04 14:36:36] 2025-06-04 18:36:23,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:36:36] 2025-06-04 18:36:23,973 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:36:36] 2025-06-04 18:36:23,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:36:36] 2025-06-04 18:36:23,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:36:36] 2025-06-04 18:36:23,974 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:36:36] 2025-06-04 18:36:23,974 | INFO     | aborting loop
[2025-06-04 14:36:36] 2025-06-04 18:36:23,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:36:36] 2025-06-04 18:36:23,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:36:36] 2025-06-04 18:36:24,212 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:36:36] 2025-06-04 18:36:24,516 | INFO     | all data control threads have been joined
[2025-06-04 14:36:36] 2025-06-04 18:36:24,716 | INFO     | all payload control threads have been joined
[2025-06-04 14:36:36] 2025-06-04 18:36:24,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:36:36] 2025-06-04 18:36:24,978 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:24,979 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:24,979 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:25,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:25,256 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:25,521 | INFO     | all job control threads have been joined
[2025-06-04 14:36:36] 2025-06-04 18:36:25,522 | INFO     | [data] control thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:25,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:36:36] 2025-06-04 18:36:25,721 | INFO     | [payload] control thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:25,808 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:25,917 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:26,274 | INFO     | [job] validate thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:26,274 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:26,367 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:26,442 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:26,522 | INFO     | [job] control thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:26,802 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:29,667 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:36:36] 2025-06-04 18:36:31,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916249765696)>', '<ExcThread(monitor, started 139915404769024)>']
[2025-06-04 14:36:36] 2025-06-04 18:36:32,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:36:36] 2025-06-04 18:36:32,012 | INFO     | [monitor] control thread has ended
[2025-06-04 14:36:36] 2025-06-04 18:36:36,795 | INFO     | all workflow threads have been joined
[2025-06-04 14:36:36] 2025-06-04 18:36:36,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:36:36] 2025-06-04 18:36:36,795 | INFO     | traces error code: 0
[2025-06-04 14:36:36] 2025-06-04 18:36:36,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:36:36] 2025-06-04 18:36:36,900 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:36:36] 2025-06-04 18:36:36,903 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:36:36] 2025-06-04 18:36:36,905 [wrapper] pilotpid: 557192
[2025-06-04 14:36:36] 2025-06-04 18:36:36,907 [wrapper] Pilot exit status: 0
[2025-06-04 14:36:36] 2025-06-04 18:36:36,913 [wrapper] pandaids: 6667931105
[2025-06-04 14:36:36] 2025-06-04 18:36:36,949 [wrapper] cleanup supervisor_pilot  641032 557193
[2025-06-04 14:36:36] 2025-06-04 18:36:36,951 [wrapper] Test setup, not cleaning
[2025-06-04 14:36:36] 2025-06-04 18:36:36,953 [wrapper] apfmon messages muted
[2025-06-04 14:36:36] 2025-06-04 18:36:36,955 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:36:36] 2025-06-04 18:36:36,957 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:36:36]  *** Error codes and diagnostics ***
[2025-06-04 14:36:36]     "exeErrorCode": 0,
[2025-06-04 14:36:36]     "exeErrorDiag": "",
[2025-06-04 14:36:36]     "pilotErrorCode": 0,
[2025-06-04 14:36:36]     "pilotErrorDiag": "",
[2025-06-04 14:36:36]  *** Listing of results directory ***
[2025-06-04 14:36:36] total 415012
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas      5111 May 28 00:40 queuedata.json
[2025-06-04 14:36:36] -rwx------. 1 boincer umatlas     37140 May 28 00:44 runpilot2-wrapper.sh
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas       100 Jun  4 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:36:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 13:48 run_atlas
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas       105 Jun  4 13:48 job.xml
[2025-06-04 14:36:36] -rw-r--r--. 2 boincer umatlas 224356301 Jun  4 13:48 EVNT.44871834._003081.pool.root.1
[2025-06-04 14:36:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:48 start_atlas.sh
[2025-06-04 14:36:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 13:48 shared
[2025-06-04 14:36:36] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 13:48 input.tar.gz
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas         0 Jun  4 13:48 boinc_lockfile
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 13:48 pandaJob.out
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas    990984 Jun  4 13:48 agis_schedconf.cvmfs.json
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas   1598969 Jun  4 13:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:36:36] drwx------. 4 boincer umatlas      4096 Jun  4 13:48 pilot3
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 14:29 init_data.xml
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas 195487601 Jun  4 14:35 HITS.44871837._078798.pool.root.1
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas       529 Jun  4 14:36 boinc_task_state.xml
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas        95 Jun  4 14:36 pilot_heartbeat.json
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas      1027 Jun  4 14:36 memory_monitor_summary.json
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas    340540 Jun  4 14:36 log.44871837._078798.job.log.tgz.1
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas      7714 Jun  4 14:36 heartbeat.json
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:36 boinc_mmap_file
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas        27 Jun  4 14:36 wrapper_checkpoint.txt
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas      4548 Jun  4 14:36 pilotlog.txt
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas    304165 Jun  4 14:36 log.44871837._078798.job.log.1
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas       357 Jun  4 14:36 output.list
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:36 runtime_log
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas    665600 Jun  4 14:36 result.tar.gz
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 14:36 runtime_log.err
[2025-06-04 14:36:36] -rw-------. 1 boincer umatlas       653 Jun  4 14:36 gPIMDmUpNe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHHbKDmJTLGMo.diag
[2025-06-04 14:36:36] -rw-r--r--. 1 boincer umatlas     21289 Jun  4 14:36 stderr.txt
[2025-06-04 14:36:37] HITS file was successfully produced:
[2025-06-04 14:36:37] -rw-------. 1 boincer umatlas 195487601 Jun  4 14:35 shared/HITS.pool.root.1
[2025-06-04 14:36:37]  *** Contents of shared directory: ***
[2025-06-04 14:36:37] total 411180
[2025-06-04 14:36:37] -rw-r--r--. 2 boincer umatlas 224356301 Jun  4 13:48 ATLAS.root_0
[2025-06-04 14:36:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 13:48 start_atlas.sh
[2025-06-04 14:36:37] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 13:48 input.tar.gz
[2025-06-04 14:36:37] -rw-------. 1 boincer umatlas 195487601 Jun  4 14:35 HITS.pool.root.1
[2025-06-04 14:36:37] -rw-------. 1 boincer umatlas    665600 Jun  4 14:36 result.tar.gz
14:36:38 (553541): run_atlas exited; CPU time 31084.434975
14:36:38 (553541): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN