Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:59:02 (454446): wrapper (7.7.26015): starting
12:59:02 (454446): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 12:59:02] Arguments: --nthreads 12
[2025-06-04 12:59:02] Threads: 12
[2025-06-04 12:59:02] Checking for CVMFS
[2025-06-04 12:59:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:59:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:59:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:59:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:59:02] 2.12.6.0 5109 31774 442724 146788 0 59 19276499 32935936 4870 16776704 0 125122039 99.670 110867981 32509 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 12:59:02] CVMFS is ok
[2025-06-04 12:59:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:59:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:59:02] Further information can be found at the LHC@home message board.
[2025-06-04 12:59:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:59:02] Checking for apptainer binary...
[2025-06-04 12:59:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:59:02] Running /usr/bin/apptainer --version
[2025-06-04 12:59:02] apptainer version 1.4.1-1.el9
[2025-06-04 12:59:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:59:03] c6-2-29-2.aglt2.org
[2025-06-04 12:59:03] apptainer works
[2025-06-04 12:59:03] Set ATHENA_PROC_NUMBER=12
[2025-06-04 12:59:03] Set ATHENA_CORE_NUMBER=12
[2025-06-04 12:59:03] Starting ATLAS job with PandaID=6667928403
[2025-06-04 12:59:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:48:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:48:12]  guid=664931b2-7cf6-4393-b156-adb6fc364ef9
[2025-06-04 13:48:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:48:12]  is_altstaged=None
[2025-06-04 13:48:12]  is_tar=False
[2025-06-04 13:48:12]  lfn=log.44871837._078562.job.log.tgz.1
[2025-06-04 13:48:12]  mtime=0
[2025-06-04 13:48:12]  protocol_id=None
[2025-06-04 13:48:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:48:12]  replicas=None
[2025-06-04 13:48:12]  scope=mc23_13p6TeV
[2025-06-04 13:48:12]  status=None
[2025-06-04 13:48:12]  status_code=0
[2025-06-04 13:48:12]  storage_token=
[2025-06-04 13:48:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667928403/log.44871837._078562.job.log.tgz.1
[2025-06-04 13:48:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/17/log.44871837._078562.job.log.tgz.1
[2025-06-04 13:48:12]  workdir=None
[2025-06-04 13:48:12] ]
[2025-06-04 13:48:12] 2025-06-04 17:47:45,229 | INFO     | transferring file log.44871837._078562.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667928403/log.44871837._078562.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:48:12] 2025-06-04 17:47:45,229 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667928403/log.44871837._078562.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._078562.job
[2025-06-04 13:48:12] 2025-06-04 17:47:45,242 | INFO     | adding to output.list: log.44871837._078562.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a0/17/log.44871837._078562.job.log.tg
[2025-06-04 13:48:12] 2025-06-04 17:47:45,243 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:48:12] 2025-06-04 17:47:45,243 | INFO     | summary of transferred files:
[2025-06-04 13:48:12] 2025-06-04 17:47:45,243 | INFO     |  -- lfn=log.44871837._078562.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:48:12] 2025-06-04 17:47:45,243 | INFO     | stage-out finished correctly
[2025-06-04 13:48:12] 2025-06-04 17:47:45,806 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:48:12] 2025-06-04 17:47:48,396 | INFO     | job 6667928403 has state=finished
[2025-06-04 13:48:12] 2025-06-04 17:47:48,396 | INFO     | preparing for final server update for job 6667928403 in state='finished'
[2025-06-04 13:48:12] 2025-06-04 17:47:48,397 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:48:12] 2025-06-04 17:47:48,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:48:12] 2025-06-04 17:47:48,397 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:48:12] 2025-06-04 17:47:48,397 | INFO     | job 6667928403 has finished - writing final server update
[2025-06-04 13:48:12] 2025-06-04 17:47:48,398 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:48:12] 2025-06-04 17:47:48,414 | INFO     | executing command: lscpu
[2025-06-04 13:48:12] 2025-06-04 17:47:48,473 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:48:12] 2025-06-04 17:47:49,839 | WARNING  | process 464641 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:48:12] 2025-06-04 17:47:49,839 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667928403/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:48:12] 2025-06-04 17:47:49,968 | INFO     | number of running child processes to parent process 464641: 1
[2025-06-04 13:48:12] 2025-06-04 17:47:49,968 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:48:12] 2025-06-04 17:47:50,846 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:48:12] 2025-06-04 17:47:50,846 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667928403/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:48:12] 2025-06-04 17:47:50,846 | INFO     | extracted standard info from prmon json
[2025-06-04 13:48:12] 2025-06-04 17:47:50,846 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:48:12] 2025-06-04 17:47:50,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:48:12] 2025-06-04 17:47:50,847 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:48:12] 2025-06-04 17:47:50,847 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:48:12] 2025-06-04 17:47:50,847 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:48:12] 2025-06-04 17:47:50,847 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | sum of deviations: -3889694645.999999
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | mean x: 1749057896.0
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | mean y: 2520798.7073170734
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | -- intersect: 318530900248.57715
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | intersect: 318530900248.57715
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | chi2: 0.09254674516654406
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | -- intersect: 318530900248.57715
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | current memory leak: -182.11 B/s (using 41 data points, chi2=0.09)
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | ..............................
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | . Timing measurements:
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | . get job = 0 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,848 | INFO     | . initial setup = 2 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,849 | INFO     | . payload setup = 4 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,849 | INFO     | . stage-in = 0 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,849 | INFO     | . payload execution = 2892 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,849 | INFO     | . stage-out = 0 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,849 | INFO     | . log creation = 0 s
[2025-06-04 13:48:12] 2025-06-04 17:47:50,849 | INFO     | ..............................
[2025-06-04 13:48:12] 2025-06-04 17:47:51,350 | INFO     | 
[2025-06-04 13:48:12] 2025-06-04 17:47:51,350 | INFO     | job summary report
[2025-06-04 13:48:12] 2025-06-04 17:47:51,350 | INFO     | --------------------------------------------------
[2025-06-04 13:48:12] 2025-06-04 17:47:51,350 | INFO     | PanDA job id: 6667928403
[2025-06-04 13:48:12] 2025-06-04 17:47:51,350 | INFO     | task id: 44871837
[2025-06-04 13:48:12] 2025-06-04 17:47:51,350 | INFO     | errors: (none)
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | pilot state: finished 
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | transexitcode: 0
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | exeerrorcode: 0
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | exeerrordiag: 
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | exitcode: 0
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | exitmsg: OK
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | cpuconsumptiontime: 31020 s
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | nevents: 400
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | neventsw: 0
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | pid: 464641
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | pgrp: 464641
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | corecount: 12
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | event service: False
[2025-06-04 13:48:12] 2025-06-04 17:47:51,351 | INFO     | sizes: {0: 2397165, 1: 2397420, 3: 2397626, 11: 2397654, 2900: 2423015, 2901: 2432139, 2902: 2432139, 2907: 2432309}
[2025-06-04 13:48:12] 2025-06-04 17:47:51,352 | INFO     | --------------------------------------------------
[2025-06-04 13:48:12] 2025-06-04 17:47:51,352 | INFO     | 
[2025-06-04 13:48:12] 2025-06-04 17:47:51,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | job 6667928403 has completed (purged errors)
[2025-06-04 13:48:12] 2025-06-04 17:47:51,368 | INFO     | overall cleanup function is called
[2025-06-04 13:48:12] 2025-06-04 17:47:52,374 | INFO     | --- collectZombieJob: --- 10, [464641]
[2025-06-04 13:48:12] 2025-06-04 17:47:52,374 | INFO     | zombie collector waiting for pid 464641
[2025-06-04 13:48:12] 2025-06-04 17:47:52,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:48:12] 2025-06-04 17:47:52,374 | INFO     | collected zombie processes
[2025-06-04 13:48:12] 2025-06-04 17:47:52,374 | INFO     | will attempt to kill all subprocesses of pid=464641
[2025-06-04 13:48:12] 2025-06-04 17:47:52,504 | INFO     | process IDs to be killed: [464641] (in reverse order)
[2025-06-04 13:48:12] 2025-06-04 17:47:52,553 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:48:12] 2025-06-04 17:47:52,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:48:12] 2025-06-04 17:47:52,563 | INFO     | did not find any defunct processes belonging to 464641
[2025-06-04 13:48:12] 2025-06-04 17:47:52,572 | INFO     | did not find any defunct processes belonging to 464641
[2025-06-04 13:48:12] 2025-06-04 17:47:52,572 | INFO     | ready for new job
[2025-06-04 13:48:12] 2025-06-04 17:47:52,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:48:12] 2025-06-04 17:47:52,574 | INFO     | **************************************
[2025-06-04 13:48:12] 2025-06-04 17:47:52,574 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:48:12] 2025-06-04 17:47:52,574 | INFO     | **************************************
[2025-06-04 13:48:12] 2025-06-04 17:47:52,574 | INFO     | 
[2025-06-04 13:48:12] 2025-06-04 17:47:52,588 | INFO     | architecture information:
[2025-06-04 13:48:12] 2025-06-04 17:47:52,589 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:48:12] 2025-06-04 17:47:52,599 | INFO     | cat /etc/os-release:
[2025-06-04 13:48:12] NAME="CentOS Linux"
[2025-06-04 13:48:12] VERSION="7 (Core)"
[2025-06-04 13:48:12] ID="centos"
[2025-06-04 13:48:12] ID_LIKE="rhel fedora"
[2025-06-04 13:48:12] VERSION_ID="7"
[2025-06-04 13:48:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:48:12] ANSI_COLOR="0;31"
[2025-06-04 13:48:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:48:12] HOME_URL="https://www.centos.org/"
[2025-06-04 13:48:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:48:12] 
[2025-06-04 13:48:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:48:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:48:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:48:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:48:12] 
[2025-06-04 13:48:12] 2025-06-04 17:47:52,600 | INFO     | **************************************
[2025-06-04 13:48:12] 2025-06-04 17:47:53,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:48:12] 2025-06-04 17:47:53,116 | INFO     | sufficient remaining disk space (76237766656 B)
[2025-06-04 13:48:12] 2025-06-04 17:47:53,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:48:12] 2025-06-04 17:47:53,116 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:48:12] 2025-06-04 17:47:53,116 | INFO     | update_server=False
[2025-06-04 13:48:12] 2025-06-04 17:47:53,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:48:12] 2025-06-04 17:47:53,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:48:12] 2025-06-04 17:47:53,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:48:12] 2025-06-04 17:47:53,477 | INFO     | aborting loop
[2025-06-04 13:48:12] 2025-06-04 17:47:53,671 | INFO     | all job control threads have been joined
[2025-06-04 13:48:12] 2025-06-04 17:47:53,922 | INFO     | PID=458083 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 13:48:12] 2025-06-04 17:47:53,922 | INFO     | .. there are 8 such processes running
[2025-06-04 13:48:12] 2025-06-04 17:47:53,922 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:48:12] 2025-06-04 17:47:53,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:48:12] 2025-06-04 17:47:53,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:48:12] 2025-06-04 17:47:53,953 | INFO     | all payload control threads have been joined
[2025-06-04 13:48:12] 2025-06-04 17:47:54,122 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:54,161 | INFO     | all data control threads have been joined
[2025-06-04 13:48:12] 2025-06-04 17:47:54,236 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:54,482 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:54,675 | INFO     | [job] control thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:54,723 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:54,958 | INFO     | [payload] control thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,167 | INFO     | [data] control thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,303 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,308 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,317 | INFO     | [job] validate thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,417 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,474 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,614 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:47:55,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:48:12] 2025-06-04 17:47:56,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:48:12] 2025-06-04 17:47:56,909 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:48:00,410 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:48:04,006 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:48:12] 2025-06-04 17:48:05,012 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:48:12] 2025-06-04 17:48:07,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643477989184)>', '<ExcThread(monitor, started 139642959533824)>']
[2025-06-04 13:48:12] 2025-06-04 17:48:07,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:48:12] 2025-06-04 17:48:07,992 | INFO     | [monitor] control thread has ended
[2025-06-04 13:48:12] 2025-06-04 17:48:12,038 | INFO     | all workflow threads have been joined
[2025-06-04 13:48:12] 2025-06-04 17:48:12,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:48:12] 2025-06-04 17:48:12,039 | INFO     | traces error code: 0
[2025-06-04 13:48:12] 2025-06-04 17:48:12,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:48:12] 2025-06-04 17:48:12,212 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:48:12] 2025-06-04 17:48:12,214 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:48:12] 2025-06-04 17:48:12,215 [wrapper] pilotpid: 458083
[2025-06-04 13:48:12] 2025-06-04 17:48:12,217 [wrapper] Pilot exit status: 0
[2025-06-04 13:48:12] 2025-06-04 17:48:12,223 [wrapper] pandaids: 6667928403
[2025-06-04 13:48:12] 2025-06-04 17:48:12,259 [wrapper] cleanup supervisor_pilot  546534 458084
[2025-06-04 13:48:12] 2025-06-04 17:48:12,261 [wrapper] Test setup, not cleaning
[2025-06-04 13:48:12] 2025-06-04 17:48:12,263 [wrapper] apfmon messages muted
[2025-06-04 13:48:12] 2025-06-04 17:48:12,264 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:48:12] 2025-06-04 17:48:12,266 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:48:12]  *** Error codes and diagnostics ***
[2025-06-04 13:48:12]     "exeErrorCode": 0,
[2025-06-04 13:48:12]     "exeErrorDiag": "",
[2025-06-04 13:48:12]     "pilotErrorCode": 0,
[2025-06-04 13:48:12]     "pilotErrorDiag": "",
[2025-06-04 13:48:12]  *** Listing of results directory ***
[2025-06-04 13:48:12] total 411836
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas    495897 May 27 23:41 pilot3.tar.gz
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas      5111 May 28 00:11 queuedata.json
[2025-06-04 13:48:12] -rwx------. 1 boincer umatlas     37140 May 28 00:16 runpilot2-wrapper.sh
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas       100 Jun  4 12:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:48:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 12:59 run_atlas
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas       105 Jun  4 12:59 job.xml
[2025-06-04 13:48:12] -rw-r--r--. 2 boincer umatlas 222369798 Jun  4 12:59 EVNT.44871834._003071.pool.root.1
[2025-06-04 13:48:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:59 start_atlas.sh
[2025-06-04 13:48:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 12:59 shared
[2025-06-04 13:48:12] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 12:59 input.tar.gz
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas         0 Jun  4 12:59 boinc_lockfile
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 12:59 pandaJob.out
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas    990984 Jun  4 12:59 agis_schedconf.cvmfs.json
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas   1598969 Jun  4 12:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:48:12] drwx------. 4 boincer umatlas      4096 Jun  4 12:59 pilot3
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 13:47 init_data.xml
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas 194177536 Jun  4 13:47 HITS.44871837._078562.pool.root.1
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas       529 Jun  4 13:47 boinc_task_state.xml
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas      1029 Jun  4 13:47 memory_monitor_summary.json
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas    357191 Jun  4 13:47 log.44871837._078562.job.log.tgz.1
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas        95 Jun  4 13:47 pilot_heartbeat.json
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas      7715 Jun  4 13:47 heartbeat.json
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:47 boinc_mmap_file
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas        27 Jun  4 13:47 wrapper_checkpoint.txt
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas      4818 Jun  4 13:48 pilotlog.txt
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas    309020 Jun  4 13:48 log.44871837._078562.job.log.1
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas       357 Jun  4 13:48 output.list
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:48 runtime_log
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas    686080 Jun  4 13:48 result.tar.gz
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 13:48 runtime_log.err
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas       653 Jun  4 13:48 r4PODmFONe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxtSKDmfMM5Hm.diag
[2025-06-04 13:48:12] -rw-r--r--. 1 boincer umatlas     21360 Jun  4 13:48 stderr.txt
[2025-06-04 13:48:12] HITS file was successfully produced:
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas 194177536 Jun  4 13:47 shared/HITS.pool.root.1
[2025-06-04 13:48:12]  *** Contents of shared directory: ***
[2025-06-04 13:48:12] total 407984
[2025-06-04 13:48:12] -rw-r--r--. 2 boincer umatlas 222369798 Jun  4 12:59 ATLAS.root_0
[2025-06-04 13:48:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:59 start_atlas.sh
[2025-06-04 13:48:12] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 12:59 input.tar.gz
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas 194177536 Jun  4 13:47 HITS.pool.root.1
[2025-06-04 13:48:12] -rw-------. 1 boincer umatlas    686080 Jun  4 13:48 result.tar.gz
13:48:13 (454446): run_atlas exited; CPU time 31062.492221
13:48:13 (454446): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN