Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:25:26 (22979): wrapper (7.7.26015): starting
10:25:26 (22979): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 10:25:26] Arguments: --nthreads 8
[2025-06-05 10:25:26] Threads: 8
[2025-06-05 10:25:26] Checking for CVMFS
[2025-06-05 10:25:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:25:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:25:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:25:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:25:29] 2.11.2.0 22556 34405 93656 146812 1 16 19226088 25165824 3143 130560 0 18313773 99.821 19352152 2096 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 10:25:29] CVMFS is ok
[2025-06-05 10:25:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:25:29] Checking for apptainer binary...
[2025-06-05 10:25:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 10:25:29] Running /usr/bin/apptainer --version
[2025-06-05 10:25:29] apptainer version 1.3.2-1.el7
[2025-06-05 10:25:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:25:33] cg-vwn431.simple-grid.lan
[2025-06-05 10:25:33] apptainer works
[2025-06-05 10:25:33] Set ATHENA_PROC_NUMBER=8
[2025-06-05 10:25:33] Set ATHENA_CORE_NUMBER=8
[2025-06-05 10:25:33] Starting ATLAS job with PandaID=6666948909
[2025-06-05 10:25:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:52:11]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:52:11] 2025-06-05 13:51:54,972 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:52:11] 2025-06-05 13:51:54,972 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:52:11] 2025-06-05 13:51:54,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:52:11] 2025-06-05 13:51:54,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:52:11] 2025-06-05 13:51:54,982 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:52:11] 2025-06-05 13:51:54,983 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 18:52:11] 2025-06-05 13:51:54,986 | INFO     | sum of deviations: 65529116745.5
[2025-06-05 18:52:11] 2025-06-05 13:51:54,986 | INFO     | mean x: 1749122001.5
[2025-06-05 18:52:11] 2025-06-05 13:51:54,986 | INFO     | mean y: 2467632.7824675324
[2025-06-05 18:52:11] 2025-06-05 13:51:54,987 | INFO     | -- intersect: -12648636237.866678
[2025-06-05 18:52:11] 2025-06-05 13:51:54,987 | INFO     | intersect: -12648636237.866678
[2025-06-05 18:52:11] 2025-06-05 13:51:54,987 | INFO     | chi2: 5.921227635818952
[2025-06-05 18:52:11] 2025-06-05 13:51:54,988 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 18:52:11] 2025-06-05 13:51:54,991 | INFO     | sum of deviations: 85465661376.00003
[2025-06-05 18:52:11] 2025-06-05 13:51:54,991 | INFO     | mean x: 1749121849.0
[2025-06-05 18:52:11] 2025-06-05 13:51:54,991 | INFO     | mean y: 2474538.587458746
[2025-06-05 18:52:11] 2025-06-05 13:51:54,991 | INFO     | -- intersect: -17327987584.634987
[2025-06-05 18:52:11] 2025-06-05 13:51:54,991 | INFO     | intersect: -17327987584.634987
[2025-06-05 18:52:11] 2025-06-05 13:51:54,992 | INFO     | chi2: 5.131770801487034
[2025-06-05 18:52:11] 2025-06-05 13:51:54,992 | INFO     | current chi2=5.131770801487034 (change=13.332654694041846 %)
[2025-06-05 18:52:11] 2025-06-05 13:51:54,992 | INFO     | right removable region: 302
[2025-06-05 18:52:11] 2025-06-05 13:51:54,993 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 18:52:11] 2025-06-05 13:51:54,996 | INFO     | sum of deviations: -38147078766.99999
[2025-06-05 18:52:11] 2025-06-05 13:51:54,996 | INFO     | mean x: 1749122154.0
[2025-06-05 18:52:11] 2025-06-05 13:51:54,996 | INFO     | mean y: 2504012.9273927393
[2025-06-05 18:52:11] 2025-06-05 13:51:54,996 | INFO     | -- intersect: 7737851851.094257
[2025-06-05 18:52:11] 2025-06-05 13:51:54,996 | INFO     | intersect: 7737851851.094257
[2025-06-05 18:52:11] 2025-06-05 13:51:54,997 | INFO     | chi2: 1.5716727586335915
[2025-06-05 18:52:11] 2025-06-05 13:51:54,997 | INFO     | current chi2=1.5716727586335915 (change=73.45697792251458 %)
[2025-06-05 18:52:11] 2025-06-05 13:51:54,997 | INFO     | sum of square deviations: 8205826414.5
[2025-06-05 18:52:11] 2025-06-05 13:51:55,005 | INFO     | sum of deviations: -67656340556.99999
[2025-06-05 18:52:11] 2025-06-05 13:51:55,011 | INFO     | mean x: 1749122306.5
[2025-06-05 18:52:11] 2025-06-05 13:51:55,011 | INFO     | mean y: 2514656.651006711
[2025-06-05 18:52:11] 2025-06-05 13:51:55,012 | INFO     | -- intersect: 14423879241.612192
[2025-06-05 18:52:11] 2025-06-05 13:51:55,012 | INFO     | intersect: 14423879241.612192
[2025-06-05 18:52:11] 2025-06-05 13:51:55,012 | INFO     | chi2: 1.0368831377463683
[2025-06-05 18:52:11] 2025-06-05 13:51:55,012 | INFO     | current chi2=1.0368831377463683 (change=34.02677929928416 %)
[2025-06-05 18:52:11] 2025-06-05 13:51:55,013 | INFO     | sum of square deviations: 7799669962.0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,015 | INFO     | sum of deviations: -61834307309.000015
[2025-06-05 18:52:11] 2025-06-05 13:51:55,016 | INFO     | mean x: 1749122459.0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,016 | INFO     | mean y: 2512456.167235495
[2025-06-05 18:52:11] 2025-06-05 13:51:55,016 | INFO     | -- intersect: 13869224275.746119
[2025-06-05 18:52:11] 2025-06-05 13:51:55,016 | INFO     | intersect: 13869224275.746119
[2025-06-05 18:52:11] 2025-06-05 13:51:55,017 | INFO     | chi2: 1.023652359378861
[2025-06-05 18:52:11] 2025-06-05 13:51:55,017 | INFO     | current chi2=1.023652359378861 (change=1.2760144210912792 %)
[2025-06-05 18:52:11] 2025-06-05 13:51:55,017 | INFO     | left removable region: 30
[2025-06-05 18:52:11] 2025-06-05 13:51:55,017 | INFO     | sum of square deviations: 6239923508.0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,020 | INFO     | sum of deviations: -10649346999.0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,020 | INFO     | mean x: 1749122733.5
[2025-06-05 18:52:11] 2025-06-05 13:51:55,020 | INFO     | mean y: 2507884.0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,020 | INFO     | -- intersect: 2987643023.71763
[2025-06-05 18:52:11] 2025-06-05 13:51:55,020 | INFO     | intersect: 2987643023.71763
[2025-06-05 18:52:11] 2025-06-05 13:51:55,021 | INFO     | chi2: 0.08439949286919887
[2025-06-05 18:52:11] 2025-06-05 13:51:55,021 | INFO     | -- intersect: 2987643023.71763
[2025-06-05 18:52:11] 2025-06-05 13:51:55,021 | INFO     | current memory leak: -1.71 B/s (using 272 data points, chi2=0.08)
[2025-06-05 18:52:11] 2025-06-05 13:51:55,022 | INFO     | ..............................
[2025-06-05 18:52:11] 2025-06-05 13:51:55,022 | INFO     | . Timing measurements:
[2025-06-05 18:52:11] 2025-06-05 13:51:55,022 | INFO     | . get job = 0 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,022 | INFO     | . initial setup = 8 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,022 | INFO     | . payload setup = 174 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,023 | INFO     | . stage-in = 0 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,023 | INFO     | . payload execution = 18931 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,023 | INFO     | . stage-out = 6 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,023 | INFO     | . log creation = 1 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,023 | INFO     | ..............................
[2025-06-05 18:52:11] 2025-06-05 13:51:55,181 | INFO     | 
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | job summary report
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | --------------------------------------------------
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | PanDA job id: 6666948909
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | task id: 44871837
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | errors: (none)
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | pilot state: finished 
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | transexitcode: 0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,182 | INFO     | exeerrorcode: 0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | exeerrordiag: 
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | exitcode: 0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | exitmsg: OK
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | cpuconsumptiontime: 70198 s
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | nevents: 400
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | neventsw: 0
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | pid: 4897
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | pgrp: 4897
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | corecount: 8
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | event service: False
[2025-06-05 18:52:11] 2025-06-05 13:51:55,183 | INFO     | sizes: {0: 2396513, 1: 2397370, 2: 2397370, 13: 2397398, 23: 2397454, 34: 2397482, 45: 2397638, 55: 2397666, 66: 2397694, 77: 2397722, 88: 2397778, 89: 2398292, 98
[2025-06-05 18:52:11] 2025-06-05 13:51:55,184 | INFO     | --------------------------------------------------
[2025-06-05 18:52:11] 2025-06-05 13:51:55,184 | INFO     | 
[2025-06-05 18:52:11] 2025-06-05 13:51:55,184 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-05 18:52:11] 2025-06-05 13:51:55,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,596 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,596 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,596 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,596 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,597 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:52:11] 2025-06-05 13:51:55,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,598 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:52:11] 2025-06-05 13:51:55,598 | INFO     | job 6666948909 has completed (purged errors)
[2025-06-05 18:52:11] 2025-06-05 13:51:55,598 | INFO     | overall cleanup function is called
[2025-06-05 18:52:11] 2025-06-05 13:51:56,608 | INFO     | --- collectZombieJob: --- 10, [4897]
[2025-06-05 18:52:11] 2025-06-05 13:51:56,608 | INFO     | zombie collector waiting for pid 4897
[2025-06-05 18:52:11] 2025-06-05 13:51:56,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:52:11] 2025-06-05 13:51:56,608 | INFO     | collected zombie processes
[2025-06-05 18:52:11] 2025-06-05 13:51:56,609 | INFO     | will attempt to kill all subprocesses of pid=4897
[2025-06-05 18:52:11] 2025-06-05 13:51:56,716 | INFO     | process IDs to be killed: [4897] (in reverse order)
[2025-06-05 18:52:11] 2025-06-05 13:51:57,537 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:52:11] 2025-06-05 13:51:57,538 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:52:11] 2025-06-05 13:51:57,542 | INFO     | did not find any defunct processes belonging to 4897
[2025-06-05 18:52:11] 2025-06-05 13:51:57,546 | INFO     | did not find any defunct processes belonging to 4897
[2025-06-05 18:52:11] 2025-06-05 13:51:57,546 | INFO     | ready for new job
[2025-06-05 18:52:11] 2025-06-05 13:51:57,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:52:11] 2025-06-05 13:51:57,550 | INFO     | **************************************
[2025-06-05 18:52:11] 2025-06-05 13:51:57,550 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:52:11] 2025-06-05 13:51:57,550 | INFO     | **************************************
[2025-06-05 18:52:11] 2025-06-05 13:51:57,550 | INFO     | 
[2025-06-05 18:52:11] 2025-06-05 13:51:57,551 | INFO     | pilot is running in a VM
[2025-06-05 18:52:11] 2025-06-05 13:51:57,551 | INFO     | architecture information:
[2025-06-05 18:52:11] 2025-06-05 13:51:57,552 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:52:11] 2025-06-05 13:51:57,703 | INFO     | cat /etc/os-release:
[2025-06-05 18:52:11] NAME="CentOS Linux"
[2025-06-05 18:52:11] VERSION="7 (Core)"
[2025-06-05 18:52:11] ID="centos"
[2025-06-05 18:52:11] ID_LIKE="rhel fedora"
[2025-06-05 18:52:11] VERSION_ID="7"
[2025-06-05 18:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:52:11] ANSI_COLOR="0;31"
[2025-06-05 18:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:52:11] HOME_URL="https://www.centos.org/"
[2025-06-05 18:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:52:11] 
[2025-06-05 18:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:52:11] 
[2025-06-05 18:52:11] 2025-06-05 13:51:57,703 | INFO     | **************************************
[2025-06-05 18:52:11] 2025-06-05 13:51:58,207 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-05 18:52:11] 2025-06-05 13:51:58,437 | INFO     | sufficient remaining disk space (497272487936 B)
[2025-06-05 18:52:11] 2025-06-05 13:51:58,437 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:52:11] 2025-06-05 13:51:58,437 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:52:11] 2025-06-05 13:51:58,437 | INFO     | update_server=False
[2025-06-05 18:52:11] 2025-06-05 13:51:58,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:52:11] 2025-06-05 13:51:58,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:52:11] 2025-06-05 13:51:58,498 | INFO     | all payload control threads have been joined
[2025-06-05 18:52:11] 2025-06-05 13:51:58,811 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 18:52:11] 2025-06-05 13:51:58,811 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 18:52:11] 2025-06-05 13:51:58,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:52:11] 2025-06-05 13:51:58,812 | INFO     | will abort loop
[2025-06-05 18:52:11] 2025-06-05 13:51:58,963 | INFO     | all job control threads have been joined
[2025-06-05 18:52:11] 2025-06-05 13:51:59,060 | INFO     | all data control threads have been joined
[2025-06-05 18:52:11] 2025-06-05 13:51:59,069 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:52:11] 2025-06-05 13:51:59,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:52:11] 2025-06-05 13:51:59,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:52:11] 2025-06-05 13:51:59,445 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:51:59,504 | INFO     | [payload] control thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:51:59,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:51:59,818 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:51:59,969 | INFO     | [job] control thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,066 | INFO     | [data] control thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:52:11] 2025-06-05 13:52:00,196 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:52:11] 2025-06-05 13:52:00,307 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,344 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,501 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,638 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,672 | INFO     | [job] validate thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:00,738 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:01,015 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:01,205 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:04,108 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:52:11] 2025-06-05 13:52:04,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140199201085248)>', '<ExcThread(monitor, started 140198889363200)>']
[2025-06-05 18:52:11] 2025-06-05 13:52:05,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:52:11] 2025-06-05 13:52:05,105 | INFO     | [monitor] control thread has ended
[2025-06-05 18:52:11] 2025-06-05 13:52:09,921 | INFO     | all workflow threads have been joined
[2025-06-05 18:52:11] 2025-06-05 13:52:09,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:52:11] 2025-06-05 13:52:09,922 | INFO     | traces error code: 0
[2025-06-05 18:52:11] 2025-06-05 13:52:09,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:52:11] 2025-06-05 13:52:10,448 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:52:11] 2025-06-05 13:52:10,551 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:52:11] 2025-06-05 13:52:10,618 [wrapper] pilotpid: 28708
[2025-06-05 18:52:11] 2025-06-05 13:52:10,666 [wrapper] Pilot exit status: 0
[2025-06-05 18:52:11] 2025-06-05 13:52:11,099 [wrapper] pandaids: 6666948909
[2025-06-05 18:52:11] 2025-06-05 13:52:11,955 [wrapper] cleanup supervisor_pilot  5858 28709
[2025-06-05 18:52:11] 2025-06-05 13:52:12,057 [wrapper] Test setup, not cleaning
[2025-06-05 18:52:11] 2025-06-05 13:52:12,120 [wrapper] apfmon messages muted
[2025-06-05 18:52:11] 2025-06-05 13:52:12,206 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:52:11] 2025-06-05 13:52:12,268 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:52:11]  *** Error codes and diagnostics ***
[2025-06-05 18:52:11]     "exeErrorCode": 0,
[2025-06-05 18:52:11]     "exeErrorDiag": "",
[2025-06-05 18:52:11]     "pilotErrorCode": 0,
[2025-06-05 18:52:11]     "pilotErrorDiag": "",
[2025-06-05 18:52:11]  *** Listing of results directory ***
[2025-06-05 18:52:11] total 419676
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc    495897 May 27 12:25 pilot3.tar.gz
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc      5111 May 27 13:08 queuedata.json
[2025-06-05 18:52:11] -rwx------. 1 boinc boinc     37140 May 27 13:11 runpilot2-wrapper.sh
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc       100 Jun  5 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:52:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 10:25 run_atlas
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc       105 Jun  5 10:25 job.xml
[2025-06-05 18:52:11] -rw-r--r--. 2 boinc boinc 225911412 Jun  5 10:25 EVNT.44871834._002617.pool.root.1
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc      6393 Jun  5 10:25 init_data.xml
[2025-06-05 18:52:11] -rw-r--r--. 2 boinc boinc     15093 Jun  5 10:25 start_atlas.sh
[2025-06-05 18:52:11] drwxrwx--x. 2 boinc boinc        68 Jun  5 10:25 shared
[2025-06-05 18:52:11] -rw-r--r--. 2 boinc boinc    508876 Jun  5 10:25 input.tar.gz
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc         0 Jun  5 10:25 boinc_lockfile
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc      2558 Jun  5 10:25 pandaJob.out
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc    983281 Jun  5 10:28 agis_schedconf.cvmfs.json
[2025-06-05 18:52:11] drwx------. 4 boinc boinc      4096 Jun  5 10:28 pilot3
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc 195881763 Jun  5 15:49 HITS.44871837._066470.pool.root.1
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc       531 Jun  5 15:49 boinc_task_state.xml
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc      1019 Jun  5 15:50 memory_monitor_summary.json
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc   1598969 Jun  5 15:50 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc    423643 Jun  5 15:50 log.44871837._066470.job.log.tgz.1
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc        95 Jun  5 15:51 pilot_heartbeat.json
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc      7691 Jun  5 15:51 heartbeat.json
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc      4603 Jun  5 15:52 pilotlog.txt
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc   1642293 Jun  5 15:52 log.44871837._066470.job.log.1
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc       357 Jun  5 15:52 output.list
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc       620 Jun  5 15:52 runtime_log
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc   2088960 Jun  5 15:52 result.tar.gz
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc      8673 Jun  5 15:52 runtime_log.err
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc       657 Jun  5 15:52 5xoLDmrO7d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVFZKDm2nsTkn.diag
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc      8192 Jun  5 18:52 boinc_mmap_file
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc        28 Jun  5 18:52 wrapper_checkpoint.txt
[2025-06-05 18:52:11] -rw-r--r--. 1 boinc boinc     20482 Jun  5 18:52 stderr.txt
[2025-06-05 18:52:11] HITS file was successfully produced:
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc 195881763 Jun  5 15:49 shared/HITS.pool.root.1
[2025-06-05 18:52:11]  *** Contents of shared directory: ***
[2025-06-05 18:52:11] total 414468
[2025-06-05 18:52:11] -rw-r--r--. 2 boinc boinc 225911412 Jun  5 10:25 ATLAS.root_0
[2025-06-05 18:52:11] -rw-r--r--. 2 boinc boinc     15093 Jun  5 10:25 start_atlas.sh
[2025-06-05 18:52:11] -rw-r--r--. 2 boinc boinc    508876 Jun  5 10:25 input.tar.gz
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc 195881763 Jun  5 15:49 HITS.pool.root.1
[2025-06-05 18:52:11] -rw-------. 1 boinc boinc   2088960 Jun  5 15:52 result.tar.gz
18:52:13 (22979): run_atlas exited; CPU time 70447.688609
18:52:13 (22979): called boinc_finish(0)

</stderr_txt>
]]>

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