Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:50:08 (93935): wrapper (7.7.26015): starting
12:50:08 (93935): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:50:08] Arguments: --nthreads 8
[2025-06-04 12:50:08] Threads: 8
[2025-06-04 12:50:08] Checking for CVMFS
[2025-06-04 12:50:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:50:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:50:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:50:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:50:08] 2.11.2.0 72091 1386 125056 146788 2 313 10265756 18432000 9401 130560 0 20916031 99.889 4190982 76504 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 12:50:08] CVMFS is ok
[2025-06-04 12:50:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:50:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:50:08] Further information can be found at the LHC@home message board.
[2025-06-04 12:50:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:50:08] Checking for apptainer binary...
[2025-06-04 12:50:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:50:08] Running /usr/bin/apptainer --version
[2025-06-04 12:50:08] apptainer version 1.3.2-1.el7
[2025-06-04 12:50:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:50:09] c-212-4.aglt2.org
[2025-06-04 12:50:09] apptainer works
[2025-06-04 12:50:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:50:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:50:09] Starting ATLAS job with PandaID=6677398427
[2025-06-04 12:50:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:45:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:45:44]  filesize=284028
[2025-06-04 13:45:44]  filetype=log
[2025-06-04 13:45:44]  guid=6c958e71-6466-4b42-b7c0-43ecf6273444
[2025-06-04 13:45:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:45:44]  is_altstaged=None
[2025-06-04 13:45:44]  is_tar=False
[2025-06-04 13:45:44]  lfn=log.45006595._010834.job.log.tgz.1
[2025-06-04 13:45:44]  mtime=0
[2025-06-04 13:45:44]  protocol_id=None
[2025-06-04 13:45:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:45:44]  replicas=None
[2025-06-04 13:45:44]  scope=mc23_13p6TeV
[2025-06-04 13:45:44]  status=None
[2025-06-04 13:45:44]  status_code=0
[2025-06-04 13:45:44]  storage_token=
[2025-06-04 13:45:44]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677398427/log.45006595._010834.job.log.tgz.1
[2025-06-04 13:45:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/94/log.45006595._010834.job.log.tgz.1
[2025-06-04 13:45:44]  workdir=None
[2025-06-04 13:45:44] ]
[2025-06-04 13:45:44] 2025-06-04 17:45:27,613 | INFO     | transferring file log.45006595._010834.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677398427/log.45006595._010834.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:45:44] 2025-06-04 17:45:27,613 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677398427/log.45006595._010834.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._010834.job
[2025-06-04 13:45:44] 2025-06-04 17:45:27,626 | INFO     | adding to output.list: log.45006595._010834.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/94/log.45006595._010834.job.log.tg
[2025-06-04 13:45:44] 2025-06-04 17:45:27,627 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:45:44] 2025-06-04 17:45:27,627 | INFO     | summary of transferred files:
[2025-06-04 13:45:44] 2025-06-04 17:45:27,627 | INFO     |  -- lfn=log.45006595._010834.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:45:44] 2025-06-04 17:45:27,627 | INFO     | stage-out finished correctly
[2025-06-04 13:45:44] 2025-06-04 17:45:27,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | job 6677398427 has state=finished
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | preparing for final server update for job 6677398427 in state='finished'
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | job 6677398427 has finished - writing final server update
[2025-06-04 13:45:44] 2025-06-04 17:45:29,339 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:45:44] 2025-06-04 17:45:29,342 | INFO     | executing command: lscpu
[2025-06-04 13:45:44] 2025-06-04 17:45:29,368 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:45:44] 2025-06-04 17:45:30,417 | WARNING  | process 6446 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:45:44] 2025-06-04 17:45:30,417 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677398427/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:45:44] 2025-06-04 17:45:30,533 | INFO     | number of running child processes to parent process 6446: 1
[2025-06-04 13:45:44] 2025-06-04 17:45:30,533 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:45:44] 2025-06-04 17:45:31,290 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:45:44] 2025-06-04 17:45:31,291 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677398427/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:45:44] 2025-06-04 17:45:31,291 | INFO     | extracted standard info from prmon json
[2025-06-04 13:45:44] 2025-06-04 17:45:31,291 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:45:44] 2025-06-04 17:45:31,291 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:45:44] 2025-06-04 17:45:31,291 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:45:44] 2025-06-04 17:45:31,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | sum of deviations: -4723333456.0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | mean x: 1749057544.0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | mean y: 2613813.063829787
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | -- intersect: 256733047142.69684
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | intersect: 256733047142.69684
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | chi2: 0.03978835034655764
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | -- intersect: 256733047142.69684
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | current memory leak: -146.78 B/s (using 47 data points, chi2=0.04)
[2025-06-04 13:45:44] 2025-06-04 17:45:31,292 | INFO     | ..............................
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . Timing measurements:
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . get job = 0 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . initial setup = 2 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . payload setup = 3 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . stage-in = 0 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . payload execution = 3290 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . stage-out = 0 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | . log creation = 0 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,293 | INFO     | ..............................
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | 
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | job summary report
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | --------------------------------------------------
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | PanDA job id: 6677398427
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | task id: 45006595
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | errors: (none)
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | pilot state: finished 
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | transexitcode: 0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | exeerrorcode: 0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | exeerrordiag: 
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | exitcode: 0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | exitmsg: OK
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | cpuconsumptiontime: 23347 s
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | nevents: 400
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | neventsw: 0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | pid: 6446
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | pgrp: 6446
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | corecount: 8
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | event service: False
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | sizes: {0: 2397340, 3: 2397546, 11: 2397574, 3297: 2423153, 3298: 2423152, 3299: 2432333, 3303: 2432447}
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | --------------------------------------------------
[2025-06-04 13:45:44] 2025-06-04 17:45:31,330 | INFO     | 
[2025-06-04 13:45:44] 2025-06-04 17:45:31,331 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | job 6677398427 has completed (purged errors)
[2025-06-04 13:45:44] 2025-06-04 17:45:31,344 | INFO     | overall cleanup function is called
[2025-06-04 13:45:44] 2025-06-04 17:45:32,350 | INFO     | --- collectZombieJob: --- 10, [6446]
[2025-06-04 13:45:44] 2025-06-04 17:45:32,350 | INFO     | zombie collector waiting for pid 6446
[2025-06-04 13:45:44] 2025-06-04 17:45:32,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:45:44] 2025-06-04 17:45:32,350 | INFO     | collected zombie processes
[2025-06-04 13:45:44] 2025-06-04 17:45:32,351 | INFO     | will attempt to kill all subprocesses of pid=6446
[2025-06-04 13:45:44] 2025-06-04 17:45:32,472 | INFO     | process IDs to be killed: [6446] (in reverse order)
[2025-06-04 13:45:44] 2025-06-04 17:45:32,540 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:45:44] 2025-06-04 17:45:32,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:45:44] 2025-06-04 17:45:32,545 | INFO     | did not find any defunct processes belonging to 6446
[2025-06-04 13:45:44] 2025-06-04 17:45:32,548 | INFO     | did not find any defunct processes belonging to 6446
[2025-06-04 13:45:44] 2025-06-04 17:45:32,549 | INFO     | ready for new job
[2025-06-04 13:45:44] 2025-06-04 17:45:32,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:45:44] 2025-06-04 17:45:32,549 | INFO     | **************************************
[2025-06-04 13:45:44] 2025-06-04 17:45:32,549 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:45:44] 2025-06-04 17:45:32,549 | INFO     | **************************************
[2025-06-04 13:45:44] 2025-06-04 17:45:32,549 | INFO     | 
[2025-06-04 13:45:44] 2025-06-04 17:45:32,552 | INFO     | architecture information:
[2025-06-04 13:45:44] 2025-06-04 17:45:32,552 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:45:44] 2025-06-04 17:45:32,564 | INFO     | cat /etc/os-release:
[2025-06-04 13:45:44] NAME="CentOS Linux"
[2025-06-04 13:45:44] VERSION="7 (Core)"
[2025-06-04 13:45:44] ID="centos"
[2025-06-04 13:45:44] ID_LIKE="rhel fedora"
[2025-06-04 13:45:44] VERSION_ID="7"
[2025-06-04 13:45:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:45:44] ANSI_COLOR="0;31"
[2025-06-04 13:45:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:45:44] HOME_URL="https://www.centos.org/"
[2025-06-04 13:45:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:45:44] 
[2025-06-04 13:45:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:45:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:45:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:45:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:45:44] 
[2025-06-04 13:45:44] 2025-06-04 17:45:32,564 | INFO     | **************************************
[2025-06-04 13:45:44] 2025-06-04 17:45:33,067 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | INFO     | sufficient remaining disk space (106710433792 B)
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | INFO     | update_server=False
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:45:44] 2025-06-04 17:45:33,077 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:45:44] 2025-06-04 17:45:33,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:45:44] 2025-06-04 17:45:33,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:45:44] 2025-06-04 17:45:33,176 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:45:44] 2025-06-04 17:45:33,366 | INFO     | all payload control threads have been joined
[2025-06-04 13:45:44] 2025-06-04 17:45:33,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:45:44] 2025-06-04 17:45:34,004 | INFO     | all data control threads have been joined
[2025-06-04 13:45:44] 2025-06-04 17:45:34,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:45:44] 2025-06-04 17:45:34,041 | INFO     | aborting loop
[2025-06-04 13:45:44] 2025-06-04 17:45:34,081 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:34,081 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:34,122 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:34,370 | INFO     | [payload] control thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:34,625 | INFO     | all job control threads have been joined
[2025-06-04 13:45:44] 2025-06-04 17:45:34,641 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,009 | INFO     | [data] control thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,046 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,053 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,117 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,161 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,182 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,284 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,388 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,471 | INFO     | [job] validate thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:35,626 | INFO     | [job] control thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:37,713 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:45:44] 2025-06-04 17:45:39,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623900907328)>', '<ExcThread(monitor, started 140623336175360)>']
[2025-06-04 13:45:44] 2025-06-04 17:45:39,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:45:44] 2025-06-04 17:45:39,108 | INFO     | [monitor] control thread has ended
[2025-06-04 13:45:44] 2025-06-04 17:45:44,101 | INFO     | all workflow threads have been joined
[2025-06-04 13:45:44] 2025-06-04 17:45:44,101 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:45:44] 2025-06-04 17:45:44,101 | INFO     | traces error code: 0
[2025-06-04 13:45:44] 2025-06-04 17:45:44,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:45:44] 2025-06-04 17:45:44,155 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:45:44] 2025-06-04 17:45:44,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:45:44] 2025-06-04 17:45:44,157 [wrapper] pilotpid: 97537
[2025-06-04 13:45:44] 2025-06-04 17:45:44,158 [wrapper] Pilot exit status: 0
[2025-06-04 13:45:44] 2025-06-04 17:45:44,163 [wrapper] pandaids: 6677398427
[2025-06-04 13:45:44] 2025-06-04 17:45:44,196 [wrapper] cleanup supervisor_pilot 97837 97538
[2025-06-04 13:45:44] 2025-06-04 17:45:44,198 [wrapper] Test setup, not cleaning
[2025-06-04 13:45:44] 2025-06-04 17:45:44,199 [wrapper] apfmon messages muted
[2025-06-04 13:45:44] 2025-06-04 17:45:44,200 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:45:44] 2025-06-04 17:45:44,201 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:45:44]  *** Error codes and diagnostics ***
[2025-06-04 13:45:44]     "exeErrorCode": 0,
[2025-06-04 13:45:44]     "exeErrorDiag": "",
[2025-06-04 13:45:44]     "pilotErrorCode": 0,
[2025-06-04 13:45:44]     "pilotErrorDiag": "",
[2025-06-04 13:45:44]  *** Listing of results directory ***
[2025-06-04 13:45:44] total 386620
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas    495897 Jun  2 16:11 pilot3.tar.gz
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas      5111 Jun  2 16:20 queuedata.json
[2025-06-04 13:45:44] -rwx------ 1 boincer umatlas     37140 Jun  2 16:21 runpilot2-wrapper.sh
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas       100 Jun  4 12:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:45:44] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 12:50 run_atlas
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas       105 Jun  4 12:50 job.xml
[2025-06-04 13:45:44] -rw-r--r-- 2 boincer umatlas 215681931 Jun  4 12:50 EVNT.45006593._000434.pool.root.1
[2025-06-04 13:45:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:50 start_atlas.sh
[2025-06-04 13:45:44] drwxrwx--x 2 boincer umatlas      4096 Jun  4 12:50 shared
[2025-06-04 13:45:44] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 12:50 input.tar.gz
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas         0 Jun  4 12:50 boinc_lockfile
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 12:50 pandaJob.out
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas    990984 Jun  4 12:50 agis_schedconf.cvmfs.json
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas   1598969 Jun  4 12:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:45:44] drwx------ 4 boincer umatlas      4096 Jun  4 12:50 pilot3
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas      6386 Jun  4 13:36 init_data.xml
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas        95 Jun  4 13:44 pilot_heartbeat.json
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas 175127884 Jun  4 13:45 HITS.45006595._010834.pool.root.1
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas       529 Jun  4 13:45 boinc_task_state.xml
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas      1082 Jun  4 13:45 memory_monitor_summary.json
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas    284028 Jun  4 13:45 log.45006595._010834.job.log.tgz.1
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas      7751 Jun  4 13:45 heartbeat.json
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:45 boinc_mmap_file
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:45 wrapper_checkpoint.txt
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas      4477 Jun  4 13:45 pilotlog.txt
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas    344158 Jun  4 13:45 log.45006595._010834.job.log.1
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas       357 Jun  4 13:45 output.list
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:45 runtime_log
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas    645120 Jun  4 13:45 result.tar.gz
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 13:45 runtime_log.err
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas       656 Jun  4 13:45 OdBMDm0pQg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaXgKDmP9yy7m.diag
[2025-06-04 13:45:44] -rw-r--r-- 1 boincer umatlas     21111 Jun  4 13:45 stderr.txt
[2025-06-04 13:45:44] HITS file was successfully produced:
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas 175127884 Jun  4 13:45 shared/HITS.pool.root.1
[2025-06-04 13:45:44]  *** Contents of shared directory: ***
[2025-06-04 13:45:44] total 382804
[2025-06-04 13:45:44] -rw-r--r-- 2 boincer umatlas 215681931 Jun  4 12:50 ATLAS.root_0
[2025-06-04 13:45:44] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:50 start_atlas.sh
[2025-06-04 13:45:44] -rw-r--r-- 2 boincer umatlas    508878 Jun  4 12:50 input.tar.gz
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas 175127884 Jun  4 13:45 HITS.pool.root.1
[2025-06-04 13:45:44] -rw------- 1 boincer umatlas    645120 Jun  4 13:45 result.tar.gz
13:45:45 (93935): run_atlas exited; CPU time 23304.904733
13:45:45 (93935): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN