Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:49:22 (2496793): wrapper (7.7.26015): starting
12:49:22 (2496793): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 12:49:22] Arguments: --nthreads 10
[2025-06-04 12:49:22] Threads: 10
[2025-06-04 12:49:22] Checking for CVMFS
[2025-06-04 12:49:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:49:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:49:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:49:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:49:22] 2.12.6.0 9377 1598 179940 146788 3 26 24453281 32935937 11053 16776704 0 8042091 99.564 7301296 33134 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 12:49:22] CVMFS is ok
[2025-06-04 12:49:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:49:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:49:22] Further information can be found at the LHC@home message board.
[2025-06-04 12:49:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:49:22] Checking for apptainer binary...
[2025-06-04 12:49:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:49:22] Running /usr/bin/apptainer --version
[2025-06-04 12:49:22] apptainer version 1.4.1-1.el9
[2025-06-04 12:49:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:49:22] c-8-15.aglt2.org
[2025-06-04 12:49:22] apptainer works
[2025-06-04 12:49:22] Set ATHENA_PROC_NUMBER=10
[2025-06-04 12:49:22] Set ATHENA_CORE_NUMBER=10
[2025-06-04 12:49:22] Starting ATLAS job with PandaID=6679880585
[2025-06-04 12:49:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:02:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:02:30]  guid=05528327-bff1-4377-bb85-e78e1417a334
[2025-06-04 14:02:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:02:30]  is_altstaged=None
[2025-06-04 14:02:30]  is_tar=False
[2025-06-04 14:02:30]  lfn=log.45006595._056820.job.log.tgz.1
[2025-06-04 14:02:30]  mtime=0
[2025-06-04 14:02:30]  protocol_id=None
[2025-06-04 14:02:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:02:30]  replicas=None
[2025-06-04 14:02:30]  scope=mc23_13p6TeV
[2025-06-04 14:02:30]  status=None
[2025-06-04 14:02:30]  status_code=0
[2025-06-04 14:02:30]  storage_token=
[2025-06-04 14:02:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679880585/log.45006595._056820.job.log.tgz.1
[2025-06-04 14:02:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/10/log.45006595._056820.job.log.tgz.1
[2025-06-04 14:02:30]  workdir=None
[2025-06-04 14:02:30] ]
[2025-06-04 14:02:30] 2025-06-04 18:02:04,069 | INFO     | transferring file log.45006595._056820.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679880585/log.45006595._056820.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:02:30] 2025-06-04 18:02:04,070 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679880585/log.45006595._056820.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056820.job
[2025-06-04 14:02:30] 2025-06-04 18:02:04,091 | INFO     | adding to output.list: log.45006595._056820.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/10/log.45006595._056820.job.log.tg
[2025-06-04 14:02:30] 2025-06-04 18:02:04,092 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:02:30] 2025-06-04 18:02:04,092 | INFO     | summary of transferred files:
[2025-06-04 14:02:30] 2025-06-04 18:02:04,092 | INFO     |  -- lfn=log.45006595._056820.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:02:30] 2025-06-04 18:02:04,093 | INFO     | stage-out finished correctly
[2025-06-04 14:02:30] 2025-06-04 18:02:05,278 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:02:30] 2025-06-04 18:02:05,965 | INFO     | job 6679880585 has state=finished
[2025-06-04 14:02:30] 2025-06-04 18:02:05,965 | INFO     | preparing for final server update for job 6679880585 in state='finished'
[2025-06-04 14:02:30] 2025-06-04 18:02:05,966 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:02:30] 2025-06-04 18:02:05,966 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:02:30] 2025-06-04 18:02:05,966 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:02:30] 2025-06-04 18:02:05,966 | INFO     | job 6679880585 has finished - writing final server update
[2025-06-04 14:02:30] 2025-06-04 18:02:05,966 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:02:30] 2025-06-04 18:02:05,981 | INFO     | executing command: lscpu
[2025-06-04 14:02:30] 2025-06-04 18:02:06,048 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:02:30] 2025-06-04 18:02:09,467 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:02:30] 2025-06-04 18:02:09,468 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679880585/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:02:30] 2025-06-04 18:02:09,469 | INFO     | extracted standard info from prmon json
[2025-06-04 14:02:30] 2025-06-04 18:02:09,469 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:02:30] 2025-06-04 18:02:09,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:02:30] 2025-06-04 18:02:09,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:02:30] 2025-06-04 18:02:09,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:02:30] 2025-06-04 18:02:09,475 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:02:30] 2025-06-04 18:02:09,475 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,476 | INFO     | sum of deviations: -11376594245.0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,476 | INFO     | mean x: 1749058025.5
[2025-06-04 14:02:30] 2025-06-04 18:02:09,476 | INFO     | mean y: 2436221.5
[2025-06-04 14:02:30] 2025-06-04 18:02:09,477 | INFO     | -- intersect: 244854733142.775
[2025-06-04 14:02:30] 2025-06-04 18:02:09,477 | INFO     | intersect: 244854733142.775
[2025-06-04 14:02:30] 2025-06-04 18:02:09,477 | INFO     | chi2: 0.13675582337111925
[2025-06-04 14:02:30] 2025-06-04 18:02:09,477 | INFO     | -- intersect: 244854733142.775
[2025-06-04 14:02:30] 2025-06-04 18:02:09,478 | INFO     | current memory leak: -139.99 B/s (using 64 data points, chi2=0.14)
[2025-06-04 14:02:30] 2025-06-04 18:02:09,478 | INFO     | ..............................
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . Timing measurements:
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . get job = 0 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . initial setup = 2 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . payload setup = 6 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . stage-in = 0 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . payload execution = 4324 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,479 | INFO     | . stage-out = 0 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,480 | INFO     | . log creation = 0 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,480 | INFO     | ..............................
[2025-06-04 14:02:30] 2025-06-04 18:02:09,707 | INFO     | 
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | job summary report
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | --------------------------------------------------
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | PanDA job id: 6679880585
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | task id: 45006595
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | errors: (none)
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | pilot state: finished 
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | transexitcode: 0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,708 | INFO     | exeerrorcode: 0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | exeerrordiag: 
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | exitcode: 0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | exitmsg: OK
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | cpuconsumptiontime: 39771 s
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | nevents: 400
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | neventsw: 0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | pid: 2507075
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | pgrp: 2507075
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | corecount: 10
[2025-06-04 14:02:30] 2025-06-04 18:02:09,709 | INFO     | event service: False
[2025-06-04 14:02:30] 2025-06-04 18:02:09,710 | INFO     | sizes: {0: 2397291, 4: 2397497, 11: 2397525, 4334: 2423524, 4335: 2432465, 4336: 2432521, 4340: 2432819}
[2025-06-04 14:02:30] 2025-06-04 18:02:09,710 | INFO     | --------------------------------------------------
[2025-06-04 14:02:30] 2025-06-04 18:02:09,710 | INFO     | 
[2025-06-04 14:02:30] 2025-06-04 18:02:09,710 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:02:30] 2025-06-04 18:02:09,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:02:30] 2025-06-04 18:02:09,726 | INFO     | job 6679880585 has completed (purged errors)
[2025-06-04 14:02:30] 2025-06-04 18:02:09,726 | INFO     | overall cleanup function is called
[2025-06-04 14:02:30] 2025-06-04 18:02:09,823 | WARNING  | process 2507075 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:02:30] 2025-06-04 18:02:10,092 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:02:30] 2025-06-04 18:02:10,396 | INFO     | number of running child processes to parent process 2507075: 1
[2025-06-04 14:02:30] 2025-06-04 18:02:10,396 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:02:30] 2025-06-04 18:02:10,397 | INFO     | aborting job monitoring since job object (job id=6679880585) has expired
[2025-06-04 14:02:30] 2025-06-04 18:02:10,734 | INFO     | --- collectZombieJob: --- 10, [2507075]
[2025-06-04 14:02:30] 2025-06-04 18:02:10,734 | INFO     | zombie collector waiting for pid 2507075
[2025-06-04 14:02:30] 2025-06-04 18:02:10,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:02:30] 2025-06-04 18:02:10,734 | INFO     | collected zombie processes
[2025-06-04 14:02:30] 2025-06-04 18:02:10,734 | INFO     | will attempt to kill all subprocesses of pid=2507075
[2025-06-04 14:02:30] 2025-06-04 18:02:10,973 | INFO     | process IDs to be killed: [2507075] (in reverse order)
[2025-06-04 14:02:30] 2025-06-04 18:02:11,061 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:02:30] 2025-06-04 18:02:11,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:02:30] 2025-06-04 18:02:11,072 | INFO     | did not find any defunct processes belonging to 2507075
[2025-06-04 14:02:30] 2025-06-04 18:02:11,083 | INFO     | did not find any defunct processes belonging to 2507075
[2025-06-04 14:02:30] 2025-06-04 18:02:11,083 | INFO     | ready for new job
[2025-06-04 14:02:30] 2025-06-04 18:02:11,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:02:30] 2025-06-04 18:02:11,085 | INFO     | **************************************
[2025-06-04 14:02:30] 2025-06-04 18:02:11,085 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:02:30] 2025-06-04 18:02:11,086 | INFO     | **************************************
[2025-06-04 14:02:30] 2025-06-04 18:02:11,086 | INFO     | 
[2025-06-04 14:02:30] 2025-06-04 18:02:11,099 | INFO     | architecture information:
[2025-06-04 14:02:30] 2025-06-04 18:02:11,100 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:02:30] 2025-06-04 18:02:11,117 | INFO     | cat /etc/os-release:
[2025-06-04 14:02:30] NAME="CentOS Linux"
[2025-06-04 14:02:30] VERSION="7 (Core)"
[2025-06-04 14:02:30] ID="centos"
[2025-06-04 14:02:30] ID_LIKE="rhel fedora"
[2025-06-04 14:02:30] VERSION_ID="7"
[2025-06-04 14:02:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:02:30] ANSI_COLOR="0;31"
[2025-06-04 14:02:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:02:30] HOME_URL="https://www.centos.org/"
[2025-06-04 14:02:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:02:30] 
[2025-06-04 14:02:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:02:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:02:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:02:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:02:30] 
[2025-06-04 14:02:30] 2025-06-04 18:02:11,118 | INFO     | **************************************
[2025-06-04 14:02:30] 2025-06-04 18:02:11,621 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:02:30] 2025-06-04 18:02:11,639 | INFO     | sufficient remaining disk space (76598476800 B)
[2025-06-04 14:02:30] 2025-06-04 18:02:11,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:02:30] 2025-06-04 18:02:11,639 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:02:30] 2025-06-04 18:02:11,640 | INFO     | update_server=False
[2025-06-04 14:02:30] 2025-06-04 18:02:11,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:02:30] 2025-06-04 18:02:11,640 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:02:30] 2025-06-04 18:02:11,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:02:30] 2025-06-04 18:02:11,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:02:30] 2025-06-04 18:02:11,641 | INFO     | aborting loop
[2025-06-04 14:02:30] 2025-06-04 18:02:11,642 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:02:30] 2025-06-04 18:02:11,642 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:02:30] 2025-06-04 18:02:11,642 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:02:30] 2025-06-04 18:02:12,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:02:30] 2025-06-04 18:02:12,482 | INFO     | all payload control threads have been joined
[2025-06-04 14:02:30] 2025-06-04 18:02:12,530 | INFO     | all data control threads have been joined
[2025-06-04 14:02:30] 2025-06-04 18:02:12,645 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:12,646 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:13,013 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:13,185 | INFO     | all job control threads have been joined
[2025-06-04 14:02:30] 2025-06-04 18:02:13,488 | INFO     | [payload] control thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:13,521 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:13,536 | INFO     | [data] control thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:13,705 | INFO     | [job] validate thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:13,714 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:14,010 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:14,110 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:14,189 | INFO     | [job] control thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:14,223 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:14,234 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:14,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:02:30] 2025-06-04 18:02:15,599 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:15,647 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:22,069 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:02:30] 2025-06-04 18:02:23,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:02:30] 2025-06-04 18:02:24,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681358743360)>', '<ExcThread(monitor, started 139680557283072)>']
[2025-06-04 14:02:30] 2025-06-04 18:02:25,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:02:30] 2025-06-04 18:02:25,713 | INFO     | [monitor] control thread has ended
[2025-06-04 14:02:30] 2025-06-04 18:02:30,020 | INFO     | all workflow threads have been joined
[2025-06-04 14:02:30] 2025-06-04 18:02:30,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:02:30] 2025-06-04 18:02:30,021 | INFO     | traces error code: 0
[2025-06-04 14:02:30] 2025-06-04 18:02:30,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:02:30] 2025-06-04 18:02:30,161 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:02:30] 2025-06-04 18:02:30,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:02:30] 2025-06-04 18:02:30,166 [wrapper] pilotpid: 2500397
[2025-06-04 14:02:30] 2025-06-04 18:02:30,169 [wrapper] Pilot exit status: 0
[2025-06-04 14:02:30] 2025-06-04 18:02:30,179 [wrapper] pandaids: 6679880585
[2025-06-04 14:02:30] 2025-06-04 18:02:30,238 [wrapper] cleanup supervisor_pilot 2654685 2500398
[2025-06-04 14:02:30] 2025-06-04 18:02:30,241 [wrapper] Test setup, not cleaning
[2025-06-04 14:02:30] 2025-06-04 18:02:30,245 [wrapper] apfmon messages muted
[2025-06-04 14:02:30] 2025-06-04 18:02:30,247 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:02:30] 2025-06-04 18:02:30,250 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:02:30]  *** Error codes and diagnostics ***
[2025-06-04 14:02:30]     "exeErrorCode": 0,
[2025-06-04 14:02:30]     "exeErrorDiag": "",
[2025-06-04 14:02:30]     "pilotErrorCode": 0,
[2025-06-04 14:02:30]     "pilotErrorDiag": "",
[2025-06-04 14:02:30]  *** Listing of results directory ***
[2025-06-04 14:02:30] total 389784
[2025-06-04 14:02:30] -rwx------. 1 boincer umatlas     37140 Jun  4 12:44 runpilot2-wrapper.sh
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 12:44 queuedata.json
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 12:44 pilot3.tar.gz
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas       100 Jun  4 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:02:30] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 12:49 run_atlas
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas       105 Jun  4 12:49 job.xml
[2025-06-04 14:02:30] -rw-r--r--. 2 boincer umatlas 213413295 Jun  4 12:49 EVNT.45006593._001596.pool.root.1
[2025-06-04 14:02:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:49 start_atlas.sh
[2025-06-04 14:02:30] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 12:49 shared
[2025-06-04 14:02:30] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 12:49 input.tar.gz
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas         0 Jun  4 12:49 boinc_lockfile
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 12:49 pandaJob.out
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas    990984 Jun  4 12:49 agis_schedconf.cvmfs.json
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas   1598969 Jun  4 12:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:02:30] drwx------. 4 boincer umatlas      4096 Jun  4 12:49 pilot3
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas 180372467 Jun  4 14:01 HITS.45006595._056820.pool.root.1
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas       529 Jun  4 14:01 boinc_task_state.xml
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas      1034 Jun  4 14:01 memory_monitor_summary.json
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas    331463 Jun  4 14:02 log.45006595._056820.job.log.tgz.1
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas      7715 Jun  4 14:02 heartbeat.json
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas        95 Jun  4 14:02 pilot_heartbeat.json
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas      6658 Jun  4 14:02 init_data.xml
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:02 boinc_mmap_file
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas        27 Jun  4 14:02 wrapper_checkpoint.txt
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas      4548 Jun  4 14:02 pilotlog.txt
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas    432523 Jun  4 14:02 log.45006595._056820.job.log.1
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas       357 Jun  4 14:02 output.list
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:02 runtime_log
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas    778240 Jun  4 14:02 result.tar.gz
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 14:02 runtime_log.err
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas       651 Jun  4 14:02 fj0MDmYP6g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW1nKDmnfIIWn.diag
[2025-06-04 14:02:30] -rw-r--r--. 1 boincer umatlas     21270 Jun  4 14:02 stderr.txt
[2025-06-04 14:02:30] HITS file was successfully produced:
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas 180372467 Jun  4 14:01 shared/HITS.pool.root.1
[2025-06-04 14:02:30]  *** Contents of shared directory: ***
[2025-06-04 14:02:30] total 385840
[2025-06-04 14:02:30] -rw-r--r--. 2 boincer umatlas 213413295 Jun  4 12:49 ATLAS.root_0
[2025-06-04 14:02:30] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:49 start_atlas.sh
[2025-06-04 14:02:30] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 12:49 input.tar.gz
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas 180372467 Jun  4 14:01 HITS.pool.root.1
[2025-06-04 14:02:30] -rw-------. 1 boincer umatlas    778240 Jun  4 14:02 result.tar.gz
14:02:31 (2496793): run_atlas exited; CPU time 39911.316700
14:02:31 (2496793): called boinc_finish(0)

</stderr_txt>
]]>

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