Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:46:07 (1873786): wrapper (7.7.26015): starting
12:46:07 (1873786): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:46:07] Arguments: --nthreads 8
[2025-06-04 12:46:07] Threads: 8
[2025-06-04 12:46:07] Checking for CVMFS
[2025-06-04 12:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:46:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:46:08] 2.12.6.0 47114 1076 155376 146788 0 360 31161853 32935937 23731 16776704 0 9589179 99.652 9443057 30308 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 12:46:08] CVMFS is ok
[2025-06-04 12:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:46:08] Further information can be found at the LHC@home message board.
[2025-06-04 12:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:46:08] Checking for apptainer binary...
[2025-06-04 12:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:46:08] Running /usr/bin/apptainer --version
[2025-06-04 12:46:08] apptainer version 1.4.1-1.el9
[2025-06-04 12:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:46:08] c7-2-15.aglt2.org
[2025-06-04 12:46:08] apptainer works
[2025-06-04 12:46:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:46:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:46:08] Starting ATLAS job with PandaID=6678156255
[2025-06-04 12:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:27:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:27:42]  is_altstaged=None
[2025-06-04 14:27:42]  is_tar=False
[2025-06-04 14:27:42]  lfn=log.45006595._048242.job.log.tgz.1
[2025-06-04 14:27:42]  mtime=0
[2025-06-04 14:27:42]  protocol_id=None
[2025-06-04 14:27:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:27:42]  replicas=None
[2025-06-04 14:27:42]  scope=mc23_13p6TeV
[2025-06-04 14:27:42]  status=None
[2025-06-04 14:27:42]  status_code=0
[2025-06-04 14:27:42]  storage_token=
[2025-06-04 14:27:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678156255/log.45006595._048242.job.log.tgz.1
[2025-06-04 14:27:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/d3/log.45006595._048242.job.log.tgz.1
[2025-06-04 14:27:42]  workdir=None
[2025-06-04 14:27:42] ]
[2025-06-04 14:27:42] 2025-06-04 18:27:16,314 | INFO     | transferring file log.45006595._048242.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678156255/log.45006595._048242.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 14:27:42] 2025-06-04 18:27:16,315 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678156255/log.45006595._048242.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048242.job
[2025-06-04 14:27:42] 2025-06-04 18:27:16,333 | INFO     | adding to output.list: log.45006595._048242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/d3/log.45006595._048242.job.log.tg
[2025-06-04 14:27:42] 2025-06-04 18:27:16,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:27:42] 2025-06-04 18:27:16,333 | INFO     | summary of transferred files:
[2025-06-04 14:27:42] 2025-06-04 18:27:16,333 | INFO     |  -- lfn=log.45006595._048242.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:27:42] 2025-06-04 18:27:16,334 | INFO     | stage-out finished correctly
[2025-06-04 14:27:42] 2025-06-04 18:27:17,841 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:27:42] 2025-06-04 18:27:17,912 | INFO     | job 6678156255 has state=finished
[2025-06-04 14:27:42] 2025-06-04 18:27:17,912 | INFO     | preparing for final server update for job 6678156255 in state='finished'
[2025-06-04 14:27:42] 2025-06-04 18:27:17,977 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 14:27:42] 2025-06-04 18:27:17,977 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:27:42] 2025-06-04 18:27:17,977 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:27:42] 2025-06-04 18:27:17,977 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:27:42] 2025-06-04 18:27:17,978 | INFO     | job 6678156255 has finished - writing final server update
[2025-06-04 14:27:42] 2025-06-04 18:27:17,978 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:27:42] 2025-06-04 18:27:17,996 | INFO     | executing command: lscpu
[2025-06-04 14:27:42] 2025-06-04 18:27:18,077 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:27:42] 2025-06-04 18:27:18,238 | INFO     | monitor loop #405: job 0:6678156255 is in state 'finished'
[2025-06-04 14:27:42] 2025-06-04 18:27:18,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:27:42] 2025-06-04 18:27:20,741 | INFO     | monitor loop #406: job 0:6678156255 is in state 'finished'
[2025-06-04 14:27:42] 2025-06-04 18:27:20,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:27:42] 2025-06-04 18:27:21,881 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:27:42] 2025-06-04 18:27:21,882 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678156255/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:27:42] 2025-06-04 18:27:21,883 | INFO     | extracted standard info from prmon json
[2025-06-04 14:27:42] 2025-06-04 18:27:21,883 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:27:42] 2025-06-04 18:27:21,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:27:42] 2025-06-04 18:27:21,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:27:42] 2025-06-04 18:27:21,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | sum of square deviations: 233641590.0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | sum of deviations: -12942047858.999998
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | mean x: 1749058715.0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | mean y: 2284152.6923076925
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | -- intersect: 96887438879.34451
[2025-06-04 14:27:42] 2025-06-04 18:27:21,885 | INFO     | intersect: 96887438879.34451
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | chi2: 0.23404304259008435
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | -- intersect: 96887438879.34451
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | current memory leak: -55.39 B/s (using 91 data points, chi2=0.23)
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | ..............................
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . Timing measurements:
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . get job = 0 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . initial setup = 3 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . payload setup = 16 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . stage-in = 0 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . payload execution = 5981 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . stage-out = 0 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | . log creation = 0 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,886 | INFO     | ..............................
[2025-06-04 14:27:42] 2025-06-04 18:27:21,954 | INFO     | 
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | job summary report
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | --------------------------------------------------
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | PanDA job id: 6678156255
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | task id: 45006595
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | errors: (none)
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | pilot state: finished 
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | transexitcode: 0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | exeerrorcode: 0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,955 | INFO     | exeerrordiag: 
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | exitcode: 0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | exitmsg: OK
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | cpuconsumptiontime: 26532 s
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | nevents: 400
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | neventsw: 0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | pid: 1887101
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | pgrp: 1887101
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | corecount: 8
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | event service: False
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | sizes: {0: 2396514, 1: 2397370, 12: 2397370, 19: 2397604, 23: 2397632, 6002: 2424522, 6003: 2433463, 6005: 2433519, 6009: 2433689}
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | --------------------------------------------------
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | 
[2025-06-04 14:27:42] 2025-06-04 18:27:21,956 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:27:42] 2025-06-04 18:27:21,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,978 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | job 6678156255 has completed (purged errors)
[2025-06-04 14:27:42] 2025-06-04 18:27:21,979 | INFO     | overall cleanup function is called
[2025-06-04 14:27:42] 2025-06-04 18:27:22,987 | INFO     | --- collectZombieJob: --- 10, [1887101]
[2025-06-04 14:27:42] 2025-06-04 18:27:22,987 | INFO     | zombie collector waiting for pid 1887101
[2025-06-04 14:27:42] 2025-06-04 18:27:22,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:27:42] 2025-06-04 18:27:22,987 | INFO     | collected zombie processes
[2025-06-04 14:27:42] 2025-06-04 18:27:22,988 | INFO     | will attempt to kill all subprocesses of pid=1887101
[2025-06-04 14:27:42] 2025-06-04 18:27:23,647 | INFO     | PID=1879912 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 14:27:42] 2025-06-04 18:27:23,647 | INFO     | .. there are 26 such processes running
[2025-06-04 14:27:42] 2025-06-04 18:27:23,651 | INFO     | process IDs to be killed: [1887101] (in reverse order)
[2025-06-04 14:27:42] 2025-06-04 18:27:23,772 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:27:42] 2025-06-04 18:27:23,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:27:42] 2025-06-04 18:27:23,788 | INFO     | did not find any defunct processes belonging to 1887101
[2025-06-04 14:27:42] 2025-06-04 18:27:23,804 | INFO     | did not find any defunct processes belonging to 1887101
[2025-06-04 14:27:42] 2025-06-04 18:27:23,805 | INFO     | ready for new job
[2025-06-04 14:27:42] 2025-06-04 18:27:23,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:27:42] 2025-06-04 18:27:23,806 | INFO     | **************************************
[2025-06-04 14:27:42] 2025-06-04 18:27:23,807 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:27:42] 2025-06-04 18:27:23,807 | INFO     | **************************************
[2025-06-04 14:27:42] 2025-06-04 18:27:23,807 | INFO     | 
[2025-06-04 14:27:42] 2025-06-04 18:27:23,824 | INFO     | architecture information:
[2025-06-04 14:27:42] 2025-06-04 18:27:23,825 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:27:42] 2025-06-04 18:27:23,841 | INFO     | cat /etc/os-release:
[2025-06-04 14:27:42] NAME="CentOS Linux"
[2025-06-04 14:27:42] VERSION="7 (Core)"
[2025-06-04 14:27:42] ID="centos"
[2025-06-04 14:27:42] ID_LIKE="rhel fedora"
[2025-06-04 14:27:42] VERSION_ID="7"
[2025-06-04 14:27:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:27:42] ANSI_COLOR="0;31"
[2025-06-04 14:27:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:27:42] HOME_URL="https://www.centos.org/"
[2025-06-04 14:27:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:27:42] 
[2025-06-04 14:27:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:27:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:27:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:27:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:27:42] 
[2025-06-04 14:27:42] 2025-06-04 18:27:23,842 | INFO     | **************************************
[2025-06-04 14:27:42] 2025-06-04 18:27:24,345 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:27:42] 2025-06-04 18:27:24,360 | INFO     | sufficient remaining disk space (76220989440 B)
[2025-06-04 14:27:42] 2025-06-04 18:27:24,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:27:42] 2025-06-04 18:27:24,360 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:27:42] 2025-06-04 18:27:24,360 | INFO     | update_server=False
[2025-06-04 14:27:42] 2025-06-04 18:27:24,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:27:42] 2025-06-04 18:27:24,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:27:42] 2025-06-04 18:27:24,361 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:27:42] 2025-06-04 18:27:24,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:27:42] 2025-06-04 18:27:24,362 | INFO     | aborting loop
[2025-06-04 14:27:42] 2025-06-04 18:27:24,363 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:27:42] 2025-06-04 18:27:24,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:27:42] 2025-06-04 18:27:24,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:27:42] 2025-06-04 18:27:24,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:27:42] 2025-06-04 18:27:24,612 | INFO     | all data control threads have been joined
[2025-06-04 14:27:42] 2025-06-04 18:27:24,827 | INFO     | all payload control threads have been joined
[2025-06-04 14:27:42] 2025-06-04 18:27:25,073 | INFO     | all job control threads have been joined
[2025-06-04 14:27:42] 2025-06-04 18:27:25,366 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,367 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,618 | INFO     | [data] control thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,640 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,690 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,802 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,833 | INFO     | [payload] control thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,839 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:25,935 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:26,078 | INFO     | [job] control thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:26,404 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:26,435 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:26,538 | INFO     | [job] validate thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:26,964 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:27:42] 2025-06-04 18:27:27,966 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:28,366 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:34,604 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:27:42] 2025-06-04 18:27:35,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:27:42] 2025-06-04 18:27:37,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206415263552)>', '<ExcThread(monitor, started 140205784823552)>']
[2025-06-04 14:27:42] 2025-06-04 18:27:37,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:27:42] 2025-06-04 18:27:37,426 | INFO     | [monitor] control thread has ended
[2025-06-04 14:27:42] 2025-06-04 18:27:42,414 | INFO     | all workflow threads have been joined
[2025-06-04 14:27:42] 2025-06-04 18:27:42,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:27:42] 2025-06-04 18:27:42,415 | INFO     | traces error code: 0
[2025-06-04 14:27:42] 2025-06-04 18:27:42,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:27:42] 2025-06-04 18:27:42,566 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:27:42] 2025-06-04 18:27:42,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:27:42] 2025-06-04 18:27:42,572 [wrapper] pilotpid: 1879912
[2025-06-04 14:27:42] 2025-06-04 18:27:42,576 [wrapper] Pilot exit status: 0
[2025-06-04 14:27:42] 2025-06-04 18:27:42,584 [wrapper] pandaids: 6678156255
[2025-06-04 14:27:42] 2025-06-04 18:27:42,645 [wrapper] cleanup supervisor_pilot 2224182 1879913
[2025-06-04 14:27:42] 2025-06-04 18:27:42,647 [wrapper] Test setup, not cleaning
[2025-06-04 14:27:42] 2025-06-04 18:27:42,649 [wrapper] apfmon messages muted
[2025-06-04 14:27:42] 2025-06-04 18:27:42,650 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:27:42] 2025-06-04 18:27:42,651 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:27:42]  *** Error codes and diagnostics ***
[2025-06-04 14:27:42]     "exeErrorCode": 0,
[2025-06-04 14:27:42]     "exeErrorDiag": "",
[2025-06-04 14:27:42]     "pilotErrorCode": 0,
[2025-06-04 14:27:42]     "pilotErrorDiag": "",
[2025-06-04 14:27:42]  *** Listing of results directory ***
[2025-06-04 14:27:42] total 387816
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:42 pilot3.tar.gz
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:43 queuedata.json
[2025-06-04 14:27:42] -rwx------. 1 boincer umatlas     37140 Jun  3 19:43 runpilot2-wrapper.sh
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas       100 Jun  4 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:27:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 12:46 run_atlas
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas       105 Jun  4 12:46 job.xml
[2025-06-04 14:27:42] -rw-r--r--. 2 boincer umatlas 213849285 Jun  4 12:46 EVNT.45006593._001937.pool.root.1
[2025-06-04 14:27:42] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 12:46 input.tar.gz
[2025-06-04 14:27:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:46 start_atlas.sh
[2025-06-04 14:27:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 12:46 shared
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas         0 Jun  4 12:46 boinc_lockfile
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 12:46 pandaJob.out
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas    990984 Jun  4 12:46 agis_schedconf.cvmfs.json
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas   1598969 Jun  4 12:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:27:42] drwx------. 4 boincer umatlas      4096 Jun  4 12:46 pilot3
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas      6929 Jun  4 14:19 init_data.xml
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas 177715421 Jun  4 14:26 HITS.45006595._048242.pool.root.1
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas       529 Jun  4 14:26 boinc_task_state.xml
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas      1031 Jun  4 14:27 memory_monitor_summary.json
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas    312747 Jun  4 14:27 log.45006595._048242.job.log.tgz.1
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas      7688 Jun  4 14:27 heartbeat.json
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas        95 Jun  4 14:27 pilot_heartbeat.json
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas        27 Jun  4 14:27 wrapper_checkpoint.txt
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:27 boinc_mmap_file
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas      4548 Jun  4 14:27 pilotlog.txt
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas    547865 Jun  4 14:27 log.45006595._048242.job.log.1
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas       357 Jun  4 14:27 output.list
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:27 runtime_log
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas    880640 Jun  4 14:27 result.tar.gz
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas       652 Jun  4 14:27 ZeoLDmTTqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWXmKDmgXkpEm.diag
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 14:27 runtime_log.err
[2025-06-04 14:27:42] -rw-r--r--. 1 boincer umatlas     21497 Jun  4 14:27 stderr.txt
[2025-06-04 14:27:42] HITS file was successfully produced:
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas 177715421 Jun  4 14:26 shared/HITS.pool.root.1
[2025-06-04 14:27:42]  *** Contents of shared directory: ***
[2025-06-04 14:27:42] total 383776
[2025-06-04 14:27:42] -rw-r--r--. 2 boincer umatlas 213849285 Jun  4 12:46 ATLAS.root_0
[2025-06-04 14:27:42] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 12:46 input.tar.gz
[2025-06-04 14:27:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:46 start_atlas.sh
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas 177715421 Jun  4 14:26 HITS.pool.root.1
[2025-06-04 14:27:42] -rw-------. 1 boincer umatlas    880640 Jun  4 14:27 result.tar.gz
14:27:44 (1873786): run_atlas exited; CPU time 26704.463876
14:27:44 (1873786): called boinc_finish(0)

</stderr_txt>
]]>

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