Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
05:17:25 (1991013): wrapper (7.7.26015): starting
05:17:25 (1991013): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 05:17:25] Arguments: --nthreads 12
[2025-06-06 05:17:25] Threads: 12
[2025-06-06 05:17:25] Checking for CVMFS
[2025-06-06 05:17:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 05:17:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 05:17:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 05:17:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 05:17:26] 2.12.7.0 600724 4931 60444 146841 0 55 2365886 4096000 0 130560 0 3864555 99.991 1157838 225 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-06 05:17:26] CVMFS is ok
[2025-06-06 05:17:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 05:17:26] Checking for apptainer binary...
[2025-06-06 05:17:26] apptainer is not installed, using version from CVMFS
[2025-06-06 05:17:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 05:17:26] lithium
[2025-06-06 05:17:26] apptainer works
[2025-06-06 05:17:26] Set ATHENA_PROC_NUMBER=12
[2025-06-06 05:17:26] Set ATHENA_CORE_NUMBER=12
[2025-06-06 05:17:26] Starting ATLAS job with PandaID=6668229840
[2025-06-06 05:17:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 07:28:39]  *** The last 200 lines of the pilot log: ***
[2025-06-06 07:28:39] 2025-06-06 05:28:18,792 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6668229840/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,793 | INFO     | extracted standard info from prmon json
[2025-06-06 07:28:39] 2025-06-06 05:28:18,793 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 07:28:39] 2025-06-06 05:28:18,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 07:28:39] 2025-06-06 05:28:18,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 07:28:39] 2025-06-06 05:28:18,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 07:28:39] 2025-06-06 05:28:18,796 | INFO     | fitting pss+swap vs Time
[2025-06-06 07:28:39] 2025-06-06 05:28:18,796 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,797 | INFO     | sum of deviations: -16009142224.5
[2025-06-06 07:28:39] 2025-06-06 05:28:18,797 | INFO     | mean x: 1749183750.5
[2025-06-06 07:28:39] 2025-06-06 05:28:18,797 | INFO     | mean y: 2835265.6328125
[2025-06-06 07:28:39] 2025-06-06 05:28:18,797 | INFO     | -- intersect: 43067559664.96067
[2025-06-06 07:28:39] 2025-06-06 05:28:18,797 | INFO     | intersect: 43067559664.96067
[2025-06-06 07:28:39] 2025-06-06 05:28:18,798 | INFO     | chi2: 1.862504233032547
[2025-06-06 07:28:39] 2025-06-06 05:28:18,798 | INFO     | sum of square deviations: 576985702.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,798 | INFO     | sum of deviations: -14008992698.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,799 | INFO     | mean x: 1749183598.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,799 | INFO     | mean y: 2839431.0894308942
[2025-06-06 07:28:39] 2025-06-06 05:28:18,799 | INFO     | -- intersect: 42472349796.605156
[2025-06-06 07:28:39] 2025-06-06 05:28:18,799 | INFO     | intersect: 42472349796.605156
[2025-06-06 07:28:39] 2025-06-06 05:28:18,799 | INFO     | chi2: 1.8633531980022318
[2025-06-06 07:28:39] 2025-06-06 05:28:18,799 | INFO     | current chi2=1.8633531980022318 (change=-0.04558190819800134 %)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,800 | INFO     | right removable region: 122
[2025-06-06 07:28:39] 2025-06-06 05:28:18,800 | INFO     | sum of square deviations: 576985702.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,800 | INFO     | sum of deviations: -38919552145.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,800 | INFO     | mean x: 1749183903.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,801 | INFO     | mean y: 2882177.764227642
[2025-06-06 07:28:39] 2025-06-06 05:28:18,801 | INFO     | -- intersect: 117990995033.98735
[2025-06-06 07:28:39] 2025-06-06 05:28:18,801 | INFO     | intersect: 117990995033.98735
[2025-06-06 07:28:39] 2025-06-06 05:28:18,801 | INFO     | chi2: 0.24624920340573872
[2025-06-06 07:28:39] 2025-06-06 05:28:18,801 | INFO     | current chi2=0.24624920340573872 (change=86.77859630929304 %)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,802 | INFO     | sum of square deviations: 509440249.5
[2025-06-06 07:28:39] 2025-06-06 05:28:18,802 | INFO     | sum of deviations: -39511457379.49999
[2025-06-06 07:28:39] 2025-06-06 05:28:18,802 | INFO     | mean x: 1749184055.5
[2025-06-06 07:28:39] 2025-06-06 05:28:18,802 | INFO     | mean y: 2883326.754237288
[2025-06-06 07:28:39] 2025-06-06 05:28:18,803 | INFO     | -- intersect: 135667097777.0677
[2025-06-06 07:28:39] 2025-06-06 05:28:18,803 | INFO     | intersect: 135667097777.0677
[2025-06-06 07:28:39] 2025-06-06 05:28:18,803 | INFO     | chi2: 0.17764739815745587
[2025-06-06 07:28:39] 2025-06-06 05:28:18,803 | INFO     | current chi2=0.17764739815745587 (change=27.858691236149646 %)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,803 | INFO     | sum of square deviations: 447383272.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,804 | INFO     | sum of deviations: -35752836025.99999
[2025-06-06 07:28:39] 2025-06-06 05:28:18,804 | INFO     | mean x: 1749184208.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,804 | INFO     | mean y: 2874072.646017699
[2025-06-06 07:28:39] 2025-06-06 05:28:18,804 | INFO     | -- intersect: 139789719227.40332
[2025-06-06 07:28:39] 2025-06-06 05:28:18,804 | INFO     | intersect: 139789719227.40332
[2025-06-06 07:28:39] 2025-06-06 05:28:18,804 | INFO     | chi2: 0.17578496513741226
[2025-06-06 07:28:39] 2025-06-06 05:28:18,805 | INFO     | current chi2=0.17578496513741226 (change=1.048387445783391 %)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,805 | INFO     | left removable region: 30
[2025-06-06 07:28:39] 2025-06-06 05:28:18,805 | INFO     | sum of square deviations: 241429643.0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,805 | INFO     | sum of deviations: -20885140868.5
[2025-06-06 07:28:39] 2025-06-06 05:28:18,805 | INFO     | mean x: 1749184482.5
[2025-06-06 07:28:39] 2025-06-06 05:28:18,806 | INFO     | mean y: 2842272.3804347827
[2025-06-06 07:28:39] 2025-06-06 05:28:18,806 | INFO     | -- intersect: 151317999218.56693
[2025-06-06 07:28:39] 2025-06-06 05:28:18,806 | INFO     | intersect: 151317999218.56693
[2025-06-06 07:28:39] 2025-06-06 05:28:18,806 | INFO     | chi2: 0.1616949180749167
[2025-06-06 07:28:39] 2025-06-06 05:28:18,806 | INFO     | -- intersect: 151317999218.56693
[2025-06-06 07:28:39] 2025-06-06 05:28:18,806 | INFO     | current memory leak: -86.51 B/s (using 92 data points, chi2=0.16)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | ..............................
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . Timing measurements:
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . get job = 0 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . initial setup = 1 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . payload setup = 5 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . stage-in = 0 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . payload execution = 7809 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,807 | INFO     | . stage-out = 0 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,808 | INFO     | . log creation = 0 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,808 | INFO     | ..............................
[2025-06-06 07:28:39] 2025-06-06 05:28:18,899 | INFO     | 
[2025-06-06 07:28:39] 2025-06-06 05:28:18,899 | INFO     | job summary report
[2025-06-06 07:28:39] 2025-06-06 05:28:18,899 | INFO     | --------------------------------------------------
[2025-06-06 07:28:39] 2025-06-06 05:28:18,899 | INFO     | PanDA job id: 6668229840
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | task id: 44871837
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | errors: (none)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | pilot state: finished 
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | transexitcode: 0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | exeerrorcode: 0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | exeerrordiag: 
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | exitcode: 0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | exitmsg: OK
[2025-06-06 07:28:39] 2025-06-06 05:28:18,900 | INFO     | cpuconsumptiontime: 85306 s
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | nevents: 400
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | neventsw: 0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | pid: 2001392
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | pgrp: 2001392
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | corecount: 12
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | event service: False
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | sizes: {0: 2397348, 3: 2397554, 11: 2397582, 7818: 2425033, 7819: 2433988, 7822: 2434044, 7830: 2434342}
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | --------------------------------------------------
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | 
[2025-06-06 07:28:39] 2025-06-06 05:28:18,901 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 07:28:39] 2025-06-06 05:28:18,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,919 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 07:28:39] 2025-06-06 05:28:18,920 | INFO     | job 6668229840 has completed (purged errors)
[2025-06-06 07:28:39] 2025-06-06 05:28:18,920 | INFO     | overall cleanup function is called
[2025-06-06 07:28:39] 2025-06-06 05:28:19,925 | INFO     | --- collectZombieJob: --- 10, [2001392]
[2025-06-06 07:28:39] 2025-06-06 05:28:19,925 | INFO     | zombie collector waiting for pid 2001392
[2025-06-06 07:28:39] 2025-06-06 05:28:19,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 07:28:39] 2025-06-06 05:28:19,926 | INFO     | collected zombie processes
[2025-06-06 07:28:39] 2025-06-06 05:28:19,926 | INFO     | will attempt to kill all subprocesses of pid=2001392
[2025-06-06 07:28:39] 2025-06-06 05:28:20,023 | INFO     | process IDs to be killed: [2001392] (in reverse order)
[2025-06-06 07:28:39] 2025-06-06 05:28:20,060 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 07:28:39] 2025-06-06 05:28:20,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 07:28:39] 2025-06-06 05:28:20,063 | INFO     | did not find any defunct processes belonging to 2001392
[2025-06-06 07:28:39] 2025-06-06 05:28:20,066 | INFO     | did not find any defunct processes belonging to 2001392
[2025-06-06 07:28:39] 2025-06-06 05:28:20,066 | INFO     | ready for new job
[2025-06-06 07:28:39] 2025-06-06 05:28:20,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 07:28:39] 2025-06-06 05:28:20,067 | INFO     | **************************************
[2025-06-06 07:28:39] 2025-06-06 05:28:20,067 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 07:28:39] 2025-06-06 05:28:20,067 | INFO     | **************************************
[2025-06-06 07:28:39] 2025-06-06 05:28:20,067 | INFO     | 
[2025-06-06 07:28:39] 2025-06-06 05:28:20,091 | INFO     | architecture information:
[2025-06-06 07:28:39] 2025-06-06 05:28:20,092 | INFO     | executing command: cat /etc/os-release
[2025-06-06 07:28:39] 2025-06-06 05:28:20,105 | INFO     | cat /etc/os-release:
[2025-06-06 07:28:39] NAME="CentOS Linux"
[2025-06-06 07:28:39] VERSION="7 (Core)"
[2025-06-06 07:28:39] ID="centos"
[2025-06-06 07:28:39] ID_LIKE="rhel fedora"
[2025-06-06 07:28:39] VERSION_ID="7"
[2025-06-06 07:28:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 07:28:39] ANSI_COLOR="0;31"
[2025-06-06 07:28:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 07:28:39] HOME_URL="https://www.centos.org/"
[2025-06-06 07:28:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 07:28:39] 
[2025-06-06 07:28:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 07:28:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 07:28:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 07:28:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 07:28:39] 
[2025-06-06 07:28:39] 2025-06-06 05:28:20,105 | INFO     | **************************************
[2025-06-06 07:28:39] 2025-06-06 05:28:20,606 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 07:28:39] 2025-06-06 05:28:20,621 | INFO     | sufficient remaining disk space (36942381056 B)
[2025-06-06 07:28:39] 2025-06-06 05:28:20,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 07:28:39] 2025-06-06 05:28:20,622 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 07:28:39] 2025-06-06 05:28:20,622 | INFO     | update_server=False
[2025-06-06 07:28:39] 2025-06-06 05:28:20,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 07:28:39] 2025-06-06 05:28:20,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:28:39] 2025-06-06 05:28:20,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 07:28:39] 2025-06-06 05:28:20,623 | INFO     | aborting loop
[2025-06-06 07:28:39] 2025-06-06 05:28:20,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 07:28:39] 2025-06-06 05:28:20,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 07:28:39] 2025-06-06 05:28:20,990 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 07:28:39] 2025-06-06 05:28:20,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 07:28:39] 2025-06-06 05:28:20,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 07:28:39] 2025-06-06 05:28:21,277 | INFO     | all data control threads have been joined
[2025-06-06 07:28:39] 2025-06-06 05:28:21,593 | INFO     | all payload control threads have been joined
[2025-06-06 07:28:39] 2025-06-06 05:28:21,625 | INFO     | [job] job monitor thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:21,626 | INFO     | [job] queue monitor thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:21,626 | INFO     | [job] retrieve thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:21,696 | INFO     | all job control threads have been joined
[2025-06-06 07:28:39] 2025-06-06 05:28:21,845 | INFO     | [payload] failed_post thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,281 | INFO     | [data] control thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,289 | INFO     | [job] validate thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,445 | INFO     | [payload] validate_post thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,497 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,597 | INFO     | [payload] control thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,617 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,621 | INFO     | [data] copytool_in thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,625 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,701 | INFO     | [job] control thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:22,901 | INFO     | [data] copytool_out thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:24,873 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:31,509 | INFO     | job.realtimelogging is not enabled
[2025-06-06 07:28:39] 2025-06-06 05:28:32,513 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 07:28:39] 2025-06-06 05:28:33,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157924443968)>', '<ExcThread(monitor, started 140157239936768)>']
[2025-06-06 07:28:39] 2025-06-06 05:28:34,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 07:28:39] 2025-06-06 05:28:34,041 | INFO     | [monitor] control thread has ended
[2025-06-06 07:28:39] 2025-06-06 05:28:38,849 | INFO     | all workflow threads have been joined
[2025-06-06 07:28:39] 2025-06-06 05:28:38,850 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 07:28:39] 2025-06-06 05:28:38,850 | INFO     | traces error code: 0
[2025-06-06 07:28:39] 2025-06-06 05:28:38,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 07:28:39] 2025-06-06 05:28:38,943 [wrapper] ==== pilot stdout END ====
[2025-06-06 07:28:39] 2025-06-06 05:28:38,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 07:28:39] 2025-06-06 05:28:38,947 [wrapper] pilotpid: 1994742
[2025-06-06 07:28:39] 2025-06-06 05:28:38,948 [wrapper] Pilot exit status: 0
[2025-06-06 07:28:39] 2025-06-06 05:28:38,955 [wrapper] pandaids: 6668229840
[2025-06-06 07:28:39] 2025-06-06 05:28:38,978 [wrapper] cleanup supervisor_pilot 2015992 1994743
[2025-06-06 07:28:39] 2025-06-06 05:28:38,980 [wrapper] Test setup, not cleaning
[2025-06-06 07:28:39] 2025-06-06 05:28:38,982 [wrapper] apfmon messages muted
[2025-06-06 07:28:39] 2025-06-06 05:28:38,985 [wrapper] ==== wrapper stdout END ====
[2025-06-06 07:28:39] 2025-06-06 05:28:38,987 [wrapper] ==== wrapper stderr END ====
[2025-06-06 07:28:39]  *** Error codes and diagnostics ***
[2025-06-06 07:28:39]     "exeErrorCode": 0,
[2025-06-06 07:28:39]     "exeErrorDiag": "",
[2025-06-06 07:28:39]     "pilotErrorCode": 0,
[2025-06-06 07:28:39]     "pilotErrorDiag": "",
[2025-06-06 07:28:39]  *** Listing of results directory ***
[2025-06-06 07:28:39] total 417032
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc    495897 Mai 28 09:05 pilot3.tar.gz
[2025-06-06 07:28:39] -rwx------ 1 boinc boinc     37140 Mai 28 09:25 runpilot2-wrapper.sh
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc      5111 Mai 28 09:25 queuedata.json
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc       100 Jun  6 05:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 07:28:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 05:17 run_atlas
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc       105 Jun  6 05:17 job.xml
[2025-06-06 07:28:39] -rw-r--r-- 2 boinc boinc     15093 Jun  6 05:17 start_atlas.sh
[2025-06-06 07:28:39] drwxrwx--x 2 boinc boinc      4096 Jun  6 05:17 shared
[2025-06-06 07:28:39] -rw-r--r-- 2 boinc boinc    508874 Jun  6 05:17 input.tar.gz
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc      6048 Jun  6 05:17 init_data.xml
[2025-06-06 07:28:39] -rw-r--r-- 2 boinc boinc 226174141 Jun  6 05:17 EVNT.44871834._003146.pool.root.1
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc         0 Jun  6 05:17 boinc_lockfile
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc      2558 Jun  6 05:17 pandaJob.out
[2025-06-06 07:28:39] -rw------- 1 boinc boinc    987721 Jun  6 05:17 agis_schedconf.cvmfs.json
[2025-06-06 07:28:39] -rw------- 1 boinc boinc   1598969 Jun  6 05:17 agis_ddmendpoints.agis.ALL.json
[2025-06-06 07:28:39] drwx------ 4 boinc boinc      4096 Jun  6 05:17 pilot3
[2025-06-06 07:28:39] -rw------- 1 boinc boinc 194785444 Jun  6 07:27 HITS.44871837._080598.pool.root.1
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc       529 Jun  6 07:27 boinc_task_state.xml
[2025-06-06 07:28:39] -rw------- 1 boinc boinc        95 Jun  6 07:27 pilot_heartbeat.json
[2025-06-06 07:28:39] -rw------- 1 boinc boinc      1070 Jun  6 07:28 memory_monitor_summary.json
[2025-06-06 07:28:39] -rw------- 1 boinc boinc    406520 Jun  6 07:28 log.44871837._080598.job.log.tgz.1
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc      8192 Jun  6 07:28 boinc_mmap_file
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc        27 Jun  6 07:28 wrapper_checkpoint.txt
[2025-06-06 07:28:39] -rw------- 1 boinc boinc      7744 Jun  6 07:28 heartbeat.json
[2025-06-06 07:28:39] -rw------- 1 boinc boinc      4432 Jun  6 07:28 pilotlog.txt
[2025-06-06 07:28:39] -rw------- 1 boinc boinc    714705 Jun  6 07:28 log.44871837._080598.job.log.1
[2025-06-06 07:28:39] -rw------- 1 boinc boinc       357 Jun  6 07:28 output.list
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc       620 Jun  6 07:28 runtime_log
[2025-06-06 07:28:39] -rw------- 1 boinc boinc   1136640 Jun  6 07:28 result.tar.gz
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc      8716 Jun  6 07:28 runtime_log.err
[2025-06-06 07:28:39] -rw------- 1 boinc boinc       657 Jun  6 07:28 ILILDmoLQe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm08SKDmiuKqKm.diag
[2025-06-06 07:28:39] -rw-r--r-- 1 boinc boinc     20522 Jun  6 07:28 stderr.txt
[2025-06-06 07:28:39] HITS file was successfully produced:
[2025-06-06 07:28:39] -rw------- 1 boinc boinc 194785444 Jun  6 07:27 shared/HITS.pool.root.1
[2025-06-06 07:28:39]  *** Contents of shared directory: ***
[2025-06-06 07:28:39] total 412736
[2025-06-06 07:28:39] -rw-r--r-- 2 boinc boinc     15093 Jun  6 05:17 start_atlas.sh
[2025-06-06 07:28:39] -rw-r--r-- 2 boinc boinc    508874 Jun  6 05:17 input.tar.gz
[2025-06-06 07:28:39] -rw-r--r-- 2 boinc boinc 226174141 Jun  6 05:17 ATLAS.root_0
[2025-06-06 07:28:39] -rw------- 1 boinc boinc 194785444 Jun  6 07:27 HITS.pool.root.1
[2025-06-06 07:28:39] -rw------- 1 boinc boinc   1136640 Jun  6 07:28 result.tar.gz
07:28:40 (1991013): run_atlas exited; CPU time 84172.401358
07:28:40 (1991013): called boinc_finish(0)

</stderr_txt>
]]>

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