Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:55:56 (99219): wrapper (7.7.26015): starting
12:55:56 (99219): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 12:55:56] Arguments: --nthreads 9
[2025-06-04 12:55:56] Threads: 9
[2025-06-04 12:55:56] Checking for CVMFS
[2025-06-04 12:55:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:55:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:55:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:55:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:55:57] 2.11.2.0 5563 29051 238608 146788 1 229 13132094 18432001 5594 130560 0 69821005 99.457 72580428 29249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 12:55:57] CVMFS is ok
[2025-06-04 12:55:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:55:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:55:57] Further information can be found at the LHC@home message board.
[2025-06-04 12:55:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:55:57] Checking for apptainer binary...
[2025-06-04 12:55:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:55:57] Running /usr/bin/apptainer --version
[2025-06-04 12:55:57] apptainer version 1.3.2-1.el7
[2025-06-04 12:55:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:55:57] c-210-35-2.aglt2.org
[2025-06-04 12:55:57] apptainer works
[2025-06-04 12:55:58] Set ATHENA_PROC_NUMBER=9
[2025-06-04 12:55:58] Set ATHENA_CORE_NUMBER=9
[2025-06-04 12:55:58] Starting ATLAS job with PandaID=6678392576
[2025-06-04 12:55:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:44:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:44:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:44:05]  is_altstaged=None
[2025-06-04 13:44:05]  is_tar=False
[2025-06-04 13:44:05]  lfn=log.45006595._055259.job.log.tgz.1
[2025-06-04 13:44:05]  mtime=0
[2025-06-04 13:44:05]  protocol_id=None
[2025-06-04 13:44:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:44:05]  replicas=None
[2025-06-04 13:44:05]  scope=mc23_13p6TeV
[2025-06-04 13:44:05]  status=None
[2025-06-04 13:44:05]  status_code=0
[2025-06-04 13:44:05]  storage_token=
[2025-06-04 13:44:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392576/log.45006595._055259.job.log.tgz.1
[2025-06-04 13:44:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/3d/log.45006595._055259.job.log.tgz.1
[2025-06-04 13:44:05]  workdir=None
[2025-06-04 13:44:05] ]
[2025-06-04 13:44:05] 2025-06-04 17:43:34,743 | INFO     | transferring file log.45006595._055259.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392576/log.45006595._055259.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:44:05] 2025-06-04 17:43:34,743 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392576/log.45006595._055259.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055259.job
[2025-06-04 13:44:05] 2025-06-04 17:43:34,771 | INFO     | adding to output.list: log.45006595._055259.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/3d/log.45006595._055259.job.log.tg
[2025-06-04 13:44:05] 2025-06-04 17:43:34,772 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:44:05] 2025-06-04 17:43:34,772 | INFO     | summary of transferred files:
[2025-06-04 13:44:05] 2025-06-04 17:43:34,772 | INFO     |  -- lfn=log.45006595._055259.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:44:05] 2025-06-04 17:43:34,772 | INFO     | stage-out finished correctly
[2025-06-04 13:44:05] 2025-06-04 17:43:36,095 | INFO     | PID=102846 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 13:44:05] 2025-06-04 17:43:36,095 | INFO     | .. there are 8 such processes running
[2025-06-04 13:44:05] 2025-06-04 17:43:37,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:44:05] 2025-06-04 17:43:39,966 | INFO     | job 6678392576 has state=finished
[2025-06-04 13:44:05] 2025-06-04 17:43:39,967 | INFO     | preparing for final server update for job 6678392576 in state='finished'
[2025-06-04 13:44:05] 2025-06-04 17:43:39,967 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:44:05] 2025-06-04 17:43:39,967 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:44:05] 2025-06-04 17:43:39,968 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:44:05] 2025-06-04 17:43:39,968 | INFO     | job 6678392576 has finished - writing final server update
[2025-06-04 13:44:05] 2025-06-04 17:43:39,968 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:44:05] 2025-06-04 17:43:39,975 | INFO     | executing command: lscpu
[2025-06-04 13:44:05] 2025-06-04 17:43:40,031 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:44:05] 2025-06-04 17:43:42,853 | WARNING  | process 109334 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:44:05] 2025-06-04 17:43:42,853 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392576/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:44:05] 2025-06-04 17:43:42,962 | INFO     | number of running child processes to parent process 109334: 1
[2025-06-04 13:44:05] 2025-06-04 17:43:42,962 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:44:05] 2025-06-04 17:43:45,023 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:44:05] 2025-06-04 17:43:45,024 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392576/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:44:05] 2025-06-04 17:43:45,024 | INFO     | extracted standard info from prmon json
[2025-06-04 13:44:05] 2025-06-04 17:43:45,025 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:44:05] 2025-06-04 17:43:45,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:44:05] 2025-06-04 17:43:45,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:44:05] 2025-06-04 17:43:45,026 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:44:05] 2025-06-04 17:43:45,027 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:44:05] 2025-06-04 17:43:45,027 | INFO     | sum of square deviations: 19832930.0
[2025-06-04 13:44:05] 2025-06-04 17:43:45,027 | INFO     | sum of deviations: -684760562.9999999
[2025-06-04 13:44:05] 2025-06-04 17:43:45,027 | INFO     | mean x: 1749057694.5
[2025-06-04 13:44:05] 2025-06-04 17:43:45,027 | INFO     | mean y: 2556315.15
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | -- intersect: 60391300268.02544
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | intersect: 60391300268.02544
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | chi2: 0.007997018408263307
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | -- intersect: 60391300268.02544
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | current memory leak: -34.53 B/s (using 40 data points, chi2=0.01)
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | ..............................
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | . Timing measurements:
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | . get job = 0 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | . initial setup = 2 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,028 | INFO     | . payload setup = 7 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,029 | INFO     | . stage-in = 0 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,029 | INFO     | . payload execution = 2822 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,029 | INFO     | . stage-out = 0 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,029 | INFO     | . log creation = 0 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,029 | INFO     | ..............................
[2025-06-04 13:44:05] 2025-06-04 17:43:45,109 | INFO     | 
[2025-06-04 13:44:05] 2025-06-04 17:43:45,110 | INFO     | job summary report
[2025-06-04 13:44:05] 2025-06-04 17:43:45,110 | INFO     | --------------------------------------------------
[2025-06-04 13:44:05] 2025-06-04 17:43:45,110 | INFO     | PanDA job id: 6678392576
[2025-06-04 13:44:05] 2025-06-04 17:43:45,110 | INFO     | task id: 45006595
[2025-06-04 13:44:05] 2025-06-04 17:43:45,110 | INFO     | errors: (none)
[2025-06-04 13:44:05] 2025-06-04 17:43:45,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | pilot state: finished 
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | transexitcode: 0
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | exeerrorcode: 0
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | exeerrordiag: 
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | exitcode: 0
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | exitmsg: OK
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | cpuconsumptiontime: 22757 s
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | nevents: 400
[2025-06-04 13:44:05] 2025-06-04 17:43:45,111 | INFO     | neventsw: 0
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | pid: 109334
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | pgrp: 109334
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | corecount: 9
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | event service: False
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | sizes: {0: 2397342, 5: 2397548, 11: 2397604, 2830: 2422814, 2831: 2431755, 2834: 2431811, 2841: 2432109}
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | --------------------------------------------------
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | 
[2025-06-04 13:44:05] 2025-06-04 17:43:45,112 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:44:05] 2025-06-04 17:43:45,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,141 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,143 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:44:05] 2025-06-04 17:43:45,144 | INFO     | job 6678392576 has completed (purged errors)
[2025-06-04 13:44:05] 2025-06-04 17:43:45,144 | INFO     | overall cleanup function is called
[2025-06-04 13:44:05] 2025-06-04 17:43:46,153 | INFO     | --- collectZombieJob: --- 10, [109334]
[2025-06-04 13:44:05] 2025-06-04 17:43:46,153 | INFO     | zombie collector waiting for pid 109334
[2025-06-04 13:44:05] 2025-06-04 17:43:46,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:44:05] 2025-06-04 17:43:46,154 | INFO     | collected zombie processes
[2025-06-04 13:44:05] 2025-06-04 17:43:46,154 | INFO     | will attempt to kill all subprocesses of pid=109334
[2025-06-04 13:44:05] 2025-06-04 17:43:46,260 | INFO     | process IDs to be killed: [109334] (in reverse order)
[2025-06-04 13:44:05] 2025-06-04 17:43:46,325 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:44:05] 2025-06-04 17:43:46,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:44:05] 2025-06-04 17:43:46,331 | INFO     | did not find any defunct processes belonging to 109334
[2025-06-04 13:44:05] 2025-06-04 17:43:46,337 | INFO     | did not find any defunct processes belonging to 109334
[2025-06-04 13:44:05] 2025-06-04 17:43:46,337 | INFO     | ready for new job
[2025-06-04 13:44:05] 2025-06-04 17:43:46,337 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:44:05] 2025-06-04 17:43:46,339 | INFO     | **************************************
[2025-06-04 13:44:05] 2025-06-04 17:43:46,339 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:44:05] 2025-06-04 17:43:46,339 | INFO     | **************************************
[2025-06-04 13:44:05] 2025-06-04 17:43:46,339 | INFO     | 
[2025-06-04 13:44:05] 2025-06-04 17:43:46,341 | INFO     | architecture information:
[2025-06-04 13:44:05] 2025-06-04 17:43:46,341 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:44:05] 2025-06-04 17:43:46,361 | INFO     | cat /etc/os-release:
[2025-06-04 13:44:05] NAME="CentOS Linux"
[2025-06-04 13:44:05] VERSION="7 (Core)"
[2025-06-04 13:44:05] ID="centos"
[2025-06-04 13:44:05] ID_LIKE="rhel fedora"
[2025-06-04 13:44:05] VERSION_ID="7"
[2025-06-04 13:44:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:44:05] ANSI_COLOR="0;31"
[2025-06-04 13:44:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:44:05] HOME_URL="https://www.centos.org/"
[2025-06-04 13:44:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:44:05] 
[2025-06-04 13:44:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:44:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:44:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:44:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:44:05] 
[2025-06-04 13:44:05] 2025-06-04 17:43:46,361 | INFO     | **************************************
[2025-06-04 13:44:05] 2025-06-04 17:43:46,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:44:05] 2025-06-04 17:43:46,891 | INFO     | sufficient remaining disk space (57781780480 B)
[2025-06-04 13:44:05] 2025-06-04 17:43:46,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:44:05] 2025-06-04 17:43:46,892 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:44:05] 2025-06-04 17:43:46,892 | INFO     | update_server=False
[2025-06-04 13:44:05] 2025-06-04 17:43:46,892 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:44:05] 2025-06-04 17:43:46,892 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:44:05] 2025-06-04 17:43:46,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:44:05] 2025-06-04 17:43:46,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:44:05] 2025-06-04 17:43:46,894 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:44:05] 2025-06-04 17:43:46,895 | INFO     | aborting loop
[2025-06-04 13:44:05] 2025-06-04 17:43:46,895 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:44:05] 2025-06-04 17:43:46,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:44:05] 2025-06-04 17:43:46,925 | INFO     | all job control threads have been joined
[2025-06-04 13:44:05] 2025-06-04 17:43:47,105 | INFO     | all data control threads have been joined
[2025-06-04 13:44:05] 2025-06-04 17:43:47,372 | INFO     | all payload control threads have been joined
[2025-06-04 13:44:05] 2025-06-04 17:43:47,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:44:05] 2025-06-04 17:43:47,898 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:47,900 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:47,900 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:47,930 | INFO     | [job] control thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:47,986 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,111 | INFO     | [data] control thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:44:05] 2025-06-04 17:43:48,376 | INFO     | [payload] control thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,497 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,612 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,777 | INFO     | [job] validate thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,889 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:48,920 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:49,103 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:49,872 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:52,380 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:57,079 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:44:05] 2025-06-04 17:43:58,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:44:05] 2025-06-04 17:43:59,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463098726208)>', '<ExcThread(monitor, started 140462677554944)>']
[2025-06-04 13:44:05] 2025-06-04 17:43:59,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:44:05] 2025-06-04 17:43:59,952 | INFO     | [monitor] control thread has ended
[2025-06-04 13:44:05] 2025-06-04 17:44:04,794 | INFO     | all workflow threads have been joined
[2025-06-04 13:44:05] 2025-06-04 17:44:04,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:44:05] 2025-06-04 17:44:04,795 | INFO     | traces error code: 0
[2025-06-04 13:44:05] 2025-06-04 17:44:04,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:44:05] 2025-06-04 17:44:04,884 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:44:05] 2025-06-04 17:44:04,889 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:44:05] 2025-06-04 17:44:04,893 [wrapper] pilotpid: 102846
[2025-06-04 13:44:05] 2025-06-04 17:44:04,897 [wrapper] Pilot exit status: 0
[2025-06-04 13:44:05] 2025-06-04 17:44:04,913 [wrapper] pandaids: 6678392576
[2025-06-04 13:44:05] 2025-06-04 17:44:04,965 [wrapper] cleanup supervisor_pilot 163167 102847
[2025-06-04 13:44:05] 2025-06-04 17:44:04,970 [wrapper] Test setup, not cleaning
[2025-06-04 13:44:05] 2025-06-04 17:44:04,975 [wrapper] apfmon messages muted
[2025-06-04 13:44:05] 2025-06-04 17:44:04,979 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:44:05] 2025-06-04 17:44:04,983 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:44:05]  *** Error codes and diagnostics ***
[2025-06-04 13:44:05]     "exeErrorCode": 0,
[2025-06-04 13:44:05]     "exeErrorDiag": "",
[2025-06-04 13:44:05]     "pilotErrorCode": 0,
[2025-06-04 13:44:05]     "pilotErrorDiag": "",
[2025-06-04 13:44:05]  *** Listing of results directory ***
[2025-06-04 13:44:05] total 392608
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:42 queuedata.json
[2025-06-04 13:44:05] -rwx------ 1 boincer umatlas     37140 Jun  4 03:43 runpilot2-wrapper.sh
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas       100 Jun  4 12:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:44:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 12:55 run_atlas
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas       105 Jun  4 12:55 job.xml
[2025-06-04 13:44:05] -rw-r--r-- 2 boincer umatlas 217531192 Jun  4 12:55 EVNT.45006593._002211.pool.root.1
[2025-06-04 13:44:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:55 start_atlas.sh
[2025-06-04 13:44:05] drwxrwx--x 2 boincer umatlas      4096 Jun  4 12:55 shared
[2025-06-04 13:44:05] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 12:55 input.tar.gz
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas         0 Jun  4 12:55 boinc_lockfile
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 12:55 pandaJob.out
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas    990984 Jun  4 12:56 agis_schedconf.cvmfs.json
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas   1598969 Jun  4 12:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:44:05] drwx------ 4 boincer umatlas      4096 Jun  4 12:56 pilot3
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas      6266 Jun  4 13:37 init_data.xml
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas 179456408 Jun  4 13:43 HITS.45006595._055259.pool.root.1
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas       530 Jun  4 13:43 boinc_task_state.xml
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas      1042 Jun  4 13:43 memory_monitor_summary.json
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas    296675 Jun  4 13:43 log.45006595._055259.job.log.tgz.1
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas        95 Jun  4 13:43 pilot_heartbeat.json
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas      7731 Jun  4 13:43 heartbeat.json
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:43 boinc_mmap_file
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:43 wrapper_checkpoint.txt
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas      4548 Jun  4 13:44 pilotlog.txt
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas    303788 Jun  4 13:44 log.45006595._055259.job.log.1
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas       357 Jun  4 13:44 output.list
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:44 runtime_log
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas    624640 Jun  4 13:44 result.tar.gz
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 13:44 runtime_log.err
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas       658 Jun  4 13:44 DMUKDmKxxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrhnKDmJJ2Ktm.diag
[2025-06-04 13:44:05] -rw-r--r-- 1 boincer umatlas     21406 Jun  4 13:44 stderr.txt
[2025-06-04 13:44:05] HITS file was successfully produced:
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas 179456408 Jun  4 13:43 shared/HITS.pool.root.1
[2025-06-04 13:44:05]  *** Contents of shared directory: ***
[2025-06-04 13:44:05] total 388820
[2025-06-04 13:44:05] -rw-r--r-- 2 boincer umatlas 217531192 Jun  4 12:55 ATLAS.root_0
[2025-06-04 13:44:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:55 start_atlas.sh
[2025-06-04 13:44:05] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 12:55 input.tar.gz
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas 179456408 Jun  4 13:43 HITS.pool.root.1
[2025-06-04 13:44:05] -rw------- 1 boincer umatlas    624640 Jun  4 13:44 result.tar.gz
13:44:06 (99219): run_atlas exited; CPU time 22749.601763
13:44:06 (99219): called boinc_finish(0)

</stderr_txt>
]]>

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