Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:25:51 (945806): wrapper (7.7.26015): starting
12:25:51 (945806): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:25:51] Arguments: --nthreads 8
[2025-06-04 12:25:51] Threads: 8
[2025-06-04 12:25:51] Checking for CVMFS
[2025-06-04 12:25:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:25:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:25:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:25:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:25:51] 2.12.6.0 383503 23746 610868 146788 3 32 25176563 32935937 7009 16776704 0 227153481 99.691 181388762 22467 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 12:25:51] CVMFS is ok
[2025-06-04 12:25:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:25:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:25:51] Further information can be found at the LHC@home message board.
[2025-06-04 12:25:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:25:51] Checking for apptainer binary...
[2025-06-04 12:25:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:25:51] Running /usr/bin/apptainer --version
[2025-06-04 12:25:51] apptainer version 1.4.1-1.el9
[2025-06-04 12:25:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:25:51] c7-2-14.aglt2.org
[2025-06-04 12:25:51] apptainer works
[2025-06-04 12:25:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:25:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:25:52] Starting ATLAS job with PandaID=6678392164
[2025-06-04 12:25:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:10:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:10:19]  filesize=291122
[2025-06-04 13:10:19]  filetype=log
[2025-06-04 13:10:19]  guid=3e88b418-837d-4486-b8ff-f466ce5fd8ea
[2025-06-04 13:10:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:10:19]  is_altstaged=None
[2025-06-04 13:10:19]  is_tar=False
[2025-06-04 13:10:19]  lfn=log.45006595._055193.job.log.tgz.1
[2025-06-04 13:10:19]  mtime=0
[2025-06-04 13:10:19]  protocol_id=None
[2025-06-04 13:10:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:10:19]  replicas=None
[2025-06-04 13:10:19]  scope=mc23_13p6TeV
[2025-06-04 13:10:19]  status=None
[2025-06-04 13:10:19]  status_code=0
[2025-06-04 13:10:19]  storage_token=
[2025-06-04 13:10:19]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6678392164/log.45006595._055193.job.log.tgz.1
[2025-06-04 13:10:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/d8/log.45006595._055193.job.log.tgz.1
[2025-06-04 13:10:19]  workdir=None
[2025-06-04 13:10:19] ]
[2025-06-04 13:10:19] 2025-06-04 17:09:54,160 | INFO     | transferring file log.45006595._055193.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6678392164/log.45006595._055193.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:10:19] 2025-06-04 17:09:54,160 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6678392164/log.45006595._055193.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._055193.job
[2025-06-04 13:10:19] 2025-06-04 17:09:54,177 | INFO     | adding to output.list: log.45006595._055193.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3c/d8/log.45006595._055193.job.log.tg
[2025-06-04 13:10:19] 2025-06-04 17:09:54,178 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:10:19] 2025-06-04 17:09:54,178 | INFO     | summary of transferred files:
[2025-06-04 13:10:19] 2025-06-04 17:09:54,178 | INFO     |  -- lfn=log.45006595._055193.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:10:19] 2025-06-04 17:09:54,178 | INFO     | stage-out finished correctly
[2025-06-04 13:10:19] 2025-06-04 17:09:55,653 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:10:19] 2025-06-04 17:09:57,257 | INFO     | job 6678392164 has state=finished
[2025-06-04 13:10:19] 2025-06-04 17:09:57,258 | INFO     | preparing for final server update for job 6678392164 in state='finished'
[2025-06-04 13:10:19] 2025-06-04 17:09:57,259 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:10:19] 2025-06-04 17:09:57,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:10:19] 2025-06-04 17:09:57,259 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:10:19] 2025-06-04 17:09:57,259 | INFO     | job 6678392164 has finished - writing final server update
[2025-06-04 13:10:19] 2025-06-04 17:09:57,259 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:10:19] 2025-06-04 17:09:57,277 | INFO     | executing command: lscpu
[2025-06-04 13:10:19] 2025-06-04 17:09:57,331 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:10:19] 2025-06-04 17:09:58,736 | WARNING  | process 976640 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:10:19] 2025-06-04 17:09:58,736 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678392164/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:10:19] 2025-06-04 17:09:58,984 | INFO     | number of running child processes to parent process 976640: 1
[2025-06-04 13:10:19] 2025-06-04 17:09:58,984 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:10:19] 2025-06-04 17:10:00,226 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:10:19] 2025-06-04 17:10:00,226 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6678392164/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:10:19] 2025-06-04 17:10:00,227 | INFO     | extracted standard info from prmon json
[2025-06-04 13:10:19] 2025-06-04 17:10:00,227 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:10:19] 2025-06-04 17:10:00,227 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:10:19] 2025-06-04 17:10:00,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:10:19] 2025-06-04 17:10:00,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:10:19] 2025-06-04 17:10:00,228 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:10:19] 2025-06-04 17:10:00,228 | INFO     | sum of square deviations: 14456085.0
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | sum of deviations: 180556949.99999997
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | mean x: 1749055753.5
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | mean y: 2330031.0555555555
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | -- intersect: -21843430576.461056
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | intersect: -21843430576.461056
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | chi2: 0.002195744354654569
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | -- intersect: -21843430576.461056
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | current memory leak: 12.49 B/s (using 36 data points, chi2=0.00)
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | ..............................
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | . Timing measurements:
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | . get job = 0 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | . initial setup = 2 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | . payload setup = 4 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,229 | INFO     | . stage-in = 0 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,230 | INFO     | . payload execution = 2612 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,230 | INFO     | . stage-out = 0 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,230 | INFO     | . log creation = 0 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,230 | INFO     | ..............................
[2025-06-04 13:10:19] 2025-06-04 17:10:00,743 | INFO     | 
[2025-06-04 13:10:19] 2025-06-04 17:10:00,743 | INFO     | job summary report
[2025-06-04 13:10:19] 2025-06-04 17:10:00,743 | INFO     | --------------------------------------------------
[2025-06-04 13:10:19] 2025-06-04 17:10:00,743 | INFO     | PanDA job id: 6678392164
[2025-06-04 13:10:19] 2025-06-04 17:10:00,743 | INFO     | task id: 45006595
[2025-06-04 13:10:19] 2025-06-04 17:10:00,743 | INFO     | errors: (none)
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | pilot state: finished 
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | transexitcode: 0
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | exeerrorcode: 0
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | exeerrordiag: 
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | exitcode: 0
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | exitmsg: OK
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | cpuconsumptiontime: 19138 s
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | nevents: 400
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | neventsw: 0
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | pid: 976640
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | pgrp: 976640
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | corecount: 8
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | event service: False
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | sizes: {0: 2397115, 1: 2397370, 4: 2397576, 11: 2397604, 2620: 2422737, 2621: 2431678, 2623: 2431862, 2627: 2432032}
[2025-06-04 13:10:19] 2025-06-04 17:10:00,744 | INFO     | --------------------------------------------------
[2025-06-04 13:10:19] 2025-06-04 17:10:00,745 | INFO     | 
[2025-06-04 13:10:19] 2025-06-04 17:10:00,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 13:10:19] 2025-06-04 17:10:00,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:10:19] 2025-06-04 17:10:00,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:10:19] 2025-06-04 17:10:00,766 | INFO     | job 6678392164 has completed (purged errors)
[2025-06-04 13:10:19] 2025-06-04 17:10:00,766 | INFO     | overall cleanup function is called
[2025-06-04 13:10:19] 2025-06-04 17:10:01,773 | INFO     | --- collectZombieJob: --- 10, [976640]
[2025-06-04 13:10:19] 2025-06-04 17:10:01,773 | INFO     | zombie collector waiting for pid 976640
[2025-06-04 13:10:19] 2025-06-04 17:10:01,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:10:19] 2025-06-04 17:10:01,774 | INFO     | collected zombie processes
[2025-06-04 13:10:19] 2025-06-04 17:10:01,774 | INFO     | will attempt to kill all subprocesses of pid=976640
[2025-06-04 13:10:19] 2025-06-04 17:10:02,087 | INFO     | process IDs to be killed: [976640] (in reverse order)
[2025-06-04 13:10:19] 2025-06-04 17:10:02,213 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:10:19] 2025-06-04 17:10:02,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:10:19] 2025-06-04 17:10:02,226 | INFO     | did not find any defunct processes belonging to 976640
[2025-06-04 13:10:19] 2025-06-04 17:10:02,238 | INFO     | did not find any defunct processes belonging to 976640
[2025-06-04 13:10:19] 2025-06-04 17:10:02,239 | INFO     | ready for new job
[2025-06-04 13:10:19] 2025-06-04 17:10:02,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:10:19] 2025-06-04 17:10:02,240 | INFO     | **************************************
[2025-06-04 13:10:19] 2025-06-04 17:10:02,240 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:10:19] 2025-06-04 17:10:02,240 | INFO     | **************************************
[2025-06-04 13:10:19] 2025-06-04 17:10:02,240 | INFO     | 
[2025-06-04 13:10:19] 2025-06-04 17:10:02,244 | INFO     | architecture information:
[2025-06-04 13:10:19] 2025-06-04 17:10:02,244 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:10:19] 2025-06-04 17:10:02,260 | INFO     | cat /etc/os-release:
[2025-06-04 13:10:19] NAME="CentOS Linux"
[2025-06-04 13:10:19] VERSION="7 (Core)"
[2025-06-04 13:10:19] ID="centos"
[2025-06-04 13:10:19] ID_LIKE="rhel fedora"
[2025-06-04 13:10:19] VERSION_ID="7"
[2025-06-04 13:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:10:19] ANSI_COLOR="0;31"
[2025-06-04 13:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:10:19] HOME_URL="https://www.centos.org/"
[2025-06-04 13:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:10:19] 
[2025-06-04 13:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:10:19] 
[2025-06-04 13:10:19] 2025-06-04 17:10:02,261 | INFO     | **************************************
[2025-06-04 13:10:19] 2025-06-04 17:10:02,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 13:10:19] 2025-06-04 17:10:02,781 | INFO     | sufficient remaining disk space (75655806976 B)
[2025-06-04 13:10:19] 2025-06-04 17:10:02,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:10:19] 2025-06-04 17:10:02,782 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:10:19] 2025-06-04 17:10:02,782 | INFO     | update_server=False
[2025-06-04 13:10:19] 2025-06-04 17:10:02,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:10:19] 2025-06-04 17:10:02,782 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:10:19] 2025-06-04 17:10:02,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:10:19] 2025-06-04 17:10:02,783 | INFO     | aborting loop
[2025-06-04 13:10:19] 2025-06-04 17:10:02,871 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:10:19] 2025-06-04 17:10:02,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:10:19] 2025-06-04 17:10:02,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:10:19] 2025-06-04 17:10:03,122 | INFO     | all job control threads have been joined
[2025-06-04 13:10:19] 2025-06-04 17:10:03,133 | INFO     | all payload control threads have been joined
[2025-06-04 13:10:19] 2025-06-04 17:10:03,784 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:03,787 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:03,824 | INFO     | all data control threads have been joined
[2025-06-04 13:10:19] 2025-06-04 17:10:04,127 | INFO     | [job] control thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:04,138 | INFO     | [payload] control thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:04,161 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:04,784 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:04,827 | INFO     | [data] control thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:04,946 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:04,972 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:05,055 | INFO     | [job] validate thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:05,157 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:05,202 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:05,211 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:05,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:10:19] 2025-06-04 17:10:06,232 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:10:19] 2025-06-04 17:10:06,290 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:10,238 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:13,147 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:10:19] 2025-06-04 17:10:14,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:10:19] 2025-06-04 17:10:14,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594864445248)>', '<ExcThread(monitor, started 140593875384064)>']
[2025-06-04 13:10:19] 2025-06-04 17:10:14,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:10:19] 2025-06-04 17:10:14,918 | INFO     | [monitor] control thread has ended
[2025-06-04 13:10:19] 2025-06-04 17:10:19,612 | INFO     | all workflow threads have been joined
[2025-06-04 13:10:19] 2025-06-04 17:10:19,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:10:19] 2025-06-04 17:10:19,612 | INFO     | traces error code: 0
[2025-06-04 13:10:19] 2025-06-04 17:10:19,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:10:19] 2025-06-04 17:10:19,748 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:10:19] 2025-06-04 17:10:19,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:10:19] 2025-06-04 17:10:19,754 [wrapper] pilotpid: 955799
[2025-06-04 13:10:19] 2025-06-04 17:10:19,757 [wrapper] Pilot exit status: 0
[2025-06-04 13:10:19] 2025-06-04 17:10:19,766 [wrapper] pandaids: 6678392164
[2025-06-04 13:10:19] 2025-06-04 17:10:19,853 [wrapper] cleanup supervisor_pilot 1121170 955800
[2025-06-04 13:10:19] 2025-06-04 17:10:19,856 [wrapper] Test setup, not cleaning
[2025-06-04 13:10:19] 2025-06-04 17:10:19,858 [wrapper] apfmon messages muted
[2025-06-04 13:10:19] 2025-06-04 17:10:19,860 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:10:19] 2025-06-04 17:10:19,861 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:10:19]  *** Error codes and diagnostics ***
[2025-06-04 13:10:19]     "exeErrorCode": 0,
[2025-06-04 13:10:19]     "exeErrorDiag": "",
[2025-06-04 13:10:19]     "pilotErrorCode": 0,
[2025-06-04 13:10:19]     "pilotErrorDiag": "",
[2025-06-04 13:10:19]  *** Listing of results directory ***
[2025-06-04 13:10:19] total 390544
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 13:10:19] -rwx------. 1 boincer umatlas     37140 Jun  4 03:39 runpilot2-wrapper.sh
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 03:39 queuedata.json
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas       100 Jun  4 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:10:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 12:25 run_atlas
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas       105 Jun  4 12:25 job.xml
[2025-06-04 13:10:19] -rw-r--r--. 2 boincer umatlas 215036282 Jun  4 12:25 EVNT.45006593._002208.pool.root.1
[2025-06-04 13:10:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:25 start_atlas.sh
[2025-06-04 13:10:19] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 12:25 shared
[2025-06-04 13:10:19] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 12:25 input.tar.gz
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas         0 Jun  4 12:25 boinc_lockfile
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 12:25 pandaJob.out
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas    990984 Jun  4 12:25 agis_schedconf.cvmfs.json
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas   1598969 Jun  4 12:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:10:19] drwx------. 4 boincer umatlas      4096 Jun  4 12:25 pilot3
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas      6934 Jun  4 13:09 init_data.xml
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas 179899667 Jun  4 13:09 HITS.45006595._055193.pool.root.1
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas       529 Jun  4 13:09 boinc_task_state.xml
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas      1032 Jun  4 13:09 memory_monitor_summary.json
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas    291122 Jun  4 13:09 log.45006595._055193.job.log.tgz.1
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas        95 Jun  4 13:09 pilot_heartbeat.json
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas      7683 Jun  4 13:10 heartbeat.json
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:10 boinc_mmap_file
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas        27 Jun  4 13:10 wrapper_checkpoint.txt
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas      4425 Jun  4 13:10 pilotlog.txt
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas    280444 Jun  4 13:10 log.45006595._055193.job.log.1
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas       357 Jun  4 13:10 output.list
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:10 runtime_log
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas    593920 Jun  4 13:10 result.tar.gz
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 13:10 runtime_log.err
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas       652 Jun  4 13:10 DETMDmEuxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmngnKDmJiPzjm.diag
[2025-06-04 13:10:19] -rw-r--r--. 1 boincer umatlas     21111 Jun  4 13:10 stderr.txt
[2025-06-04 13:10:19] HITS file was successfully produced:
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas 179899667 Jun  4 13:09 shared/HITS.pool.root.1
[2025-06-04 13:10:19]  *** Contents of shared directory: ***
[2025-06-04 13:10:19] total 386784
[2025-06-04 13:10:19] -rw-r--r--. 2 boincer umatlas 215036282 Jun  4 12:25 ATLAS.root_0
[2025-06-04 13:10:19] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 12:25 start_atlas.sh
[2025-06-04 13:10:19] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 12:25 input.tar.gz
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas 179899667 Jun  4 13:09 HITS.pool.root.1
[2025-06-04 13:10:19] -rw-------. 1 boincer umatlas    593920 Jun  4 13:10 result.tar.gz
13:10:21 (945806): run_atlas exited; CPU time 19193.268627
13:10:21 (945806): called boinc_finish(0)

</stderr_txt>
]]>

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