Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:19 (46434): wrapper (7.7.26015): starting
12:15:19 (46434): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:15:19] Arguments: --nthreads 8
[2025-06-04 12:15:19] Threads: 8
[2025-06-04 12:15:19] Checking for CVMFS
[2025-06-04 12:15:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:15:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:15:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:15:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:15:19] 2.11.2.0 10304 12875 320888 146787 1 245 11847987 18432001 11827 130560 0 111990069 99.322 150486242 50811 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 12:15:19] CVMFS is ok
[2025-06-04 12:15:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:15:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:15:19] Further information can be found at the LHC@home message board.
[2025-06-04 12:15:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:15:19] Checking for apptainer binary...
[2025-06-04 12:15:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:15:19] Running /usr/bin/apptainer --version
[2025-06-04 12:15:19] apptainer version 1.3.2-1.el7
[2025-06-04 12:15:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:15:21] c-212-11.aglt2.org
[2025-06-04 12:15:21] apptainer works
[2025-06-04 12:15:21] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:15:21] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:15:21] Starting ATLAS job with PandaID=6679857016
[2025-06-04 12:15:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:42:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:42:49]  is_altstaged=None
[2025-06-04 13:42:49]  is_tar=False
[2025-06-04 13:42:49]  lfn=log.44871837._102231.job.log.tgz.1
[2025-06-04 13:42:49]  mtime=0
[2025-06-04 13:42:49]  protocol_id=None
[2025-06-04 13:42:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:42:49]  replicas=None
[2025-06-04 13:42:49]  scope=mc23_13p6TeV
[2025-06-04 13:42:49]  status=None
[2025-06-04 13:42:49]  status_code=0
[2025-06-04 13:42:49]  storage_token=
[2025-06-04 13:42:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679857016/log.44871837._102231.job.log.tgz.1
[2025-06-04 13:42:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/31/log.44871837._102231.job.log.tgz.1
[2025-06-04 13:42:49]  workdir=None
[2025-06-04 13:42:49] ]
[2025-06-04 13:42:49] 2025-06-04 17:42:22,215 | INFO     | transferring file log.44871837._102231.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679857016/log.44871837._102231.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:42:49] 2025-06-04 17:42:22,215 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679857016/log.44871837._102231.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._102231.job
[2025-06-04 13:42:49] 2025-06-04 17:42:22,315 | INFO     | adding to output.list: log.44871837._102231.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/31/log.44871837._102231.job.log.tg
[2025-06-04 13:42:49] 2025-06-04 17:42:22,315 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:42:49] 2025-06-04 17:42:22,315 | INFO     | summary of transferred files:
[2025-06-04 13:42:49] 2025-06-04 17:42:22,315 | INFO     |  -- lfn=log.44871837._102231.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:42:49] 2025-06-04 17:42:22,316 | INFO     | stage-out finished correctly
[2025-06-04 13:42:49] 2025-06-04 17:42:23,748 | INFO     | monitor loop #395: job 0:6679857016 is in state 'finished'
[2025-06-04 13:42:49] 2025-06-04 17:42:23,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:42:49] 2025-06-04 17:42:24,080 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:42:49] 2025-06-04 17:42:24,870 | INFO     | job 6679857016 has state=finished
[2025-06-04 13:42:49] 2025-06-04 17:42:24,870 | INFO     | preparing for final server update for job 6679857016 in state='finished'
[2025-06-04 13:42:49] 2025-06-04 17:42:24,870 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:42:49] 2025-06-04 17:42:24,870 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:42:49] 2025-06-04 17:42:24,871 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:42:49] 2025-06-04 17:42:24,871 | INFO     | job 6679857016 has finished - writing final server update
[2025-06-04 13:42:49] 2025-06-04 17:42:24,871 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:42:49] 2025-06-04 17:42:24,873 | INFO     | executing command: lscpu
[2025-06-04 13:42:49] 2025-06-04 17:42:24,896 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:42:49] 2025-06-04 17:42:26,252 | INFO     | monitor loop #396: job 0:6679857016 is in state 'finished'
[2025-06-04 13:42:49] 2025-06-04 17:42:26,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:42:49] 2025-06-04 17:42:27,841 | INFO     | 5221s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 13:42:49] 2025-06-04 17:42:28,754 | INFO     | monitor loop #397: job 0:6679857016 is in state 'finished'
[2025-06-04 13:42:49] 2025-06-04 17:42:28,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:42:49] 2025-06-04 17:42:29,378 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:42:49] 2025-06-04 17:42:29,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679857016/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:42:49] 2025-06-04 17:42:29,379 | INFO     | extracted standard info from prmon json
[2025-06-04 13:42:49] 2025-06-04 17:42:29,379 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:42:49] 2025-06-04 17:42:29,379 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:42:49] 2025-06-04 17:42:29,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:42:49] 2025-06-04 17:42:29,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:42:49] 2025-06-04 17:42:29,380 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:42:49] 2025-06-04 17:42:29,380 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,380 | INFO     | sum of deviations: -4044201851.0000014
[2025-06-04 13:42:49] 2025-06-04 17:42:29,380 | INFO     | mean x: 1749056432.0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,380 | INFO     | mean y: 2561305.810126582
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | -- intersect: 46277573361.375824
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | intersect: 46277573361.375824
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | chi2: 0.008708549974153856
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | -- intersect: 46277573361.375824
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | current memory leak: -26.46 B/s (using 79 data points, chi2=0.01)
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | ..............................
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . Timing measurements:
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . get job = 0 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . initial setup = 1 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . payload setup = 4 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . stage-in = 0 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . payload execution = 5192 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . stage-out = 0 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | . log creation = 0 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,381 | INFO     | ..............................
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | 
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | job summary report
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | --------------------------------------------------
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | PanDA job id: 6679857016
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | task id: 44871837
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | errors: (none)
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | pilot state: finished 
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | transexitcode: 0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | exeerrorcode: 0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | exeerrordiag: 
[2025-06-04 13:42:49] 2025-06-04 17:42:29,810 | INFO     | exitcode: 0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | exitmsg: OK
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | cpuconsumptiontime: 38007 s
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | nevents: 400
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | neventsw: 0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | pid: 57477
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | pgrp: 57477
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | corecount: 8
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | event service: False
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | sizes: {0: 2397114, 1: 2397369, 3: 2397575, 11: 2397603, 5200: 2424061, 5201: 2424060, 5202: 2433185, 5203: 2433241, 5209: 2433411}
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | --------------------------------------------------
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | 
[2025-06-04 13:42:49] 2025-06-04 17:42:29,811 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:42:49] 2025-06-04 17:42:29,828 | INFO     | job 6679857016 has completed (purged errors)
[2025-06-04 13:42:49] 2025-06-04 17:42:29,828 | INFO     | overall cleanup function is called
[2025-06-04 13:42:49] 2025-06-04 17:42:30,833 | INFO     | --- collectZombieJob: --- 10, [57477]
[2025-06-04 13:42:49] 2025-06-04 17:42:30,833 | INFO     | zombie collector waiting for pid 57477
[2025-06-04 13:42:49] 2025-06-04 17:42:30,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:42:49] 2025-06-04 17:42:30,834 | INFO     | collected zombie processes
[2025-06-04 13:42:49] 2025-06-04 17:42:30,834 | INFO     | will attempt to kill all subprocesses of pid=57477
[2025-06-04 13:42:49] 2025-06-04 17:42:30,970 | INFO     | process IDs to be killed: [57477] (in reverse order)
[2025-06-04 13:42:49] 2025-06-04 17:42:31,097 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:42:49] 2025-06-04 17:42:31,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:42:49] 2025-06-04 17:42:31,106 | INFO     | did not find any defunct processes belonging to 57477
[2025-06-04 13:42:49] 2025-06-04 17:42:31,114 | INFO     | did not find any defunct processes belonging to 57477
[2025-06-04 13:42:49] 2025-06-04 17:42:31,114 | INFO     | ready for new job
[2025-06-04 13:42:49] 2025-06-04 17:42:31,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:42:49] 2025-06-04 17:42:31,115 | INFO     | **************************************
[2025-06-04 13:42:49] 2025-06-04 17:42:31,115 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:42:49] 2025-06-04 17:42:31,115 | INFO     | **************************************
[2025-06-04 13:42:49] 2025-06-04 17:42:31,115 | INFO     | 
[2025-06-04 13:42:49] 2025-06-04 17:42:31,119 | INFO     | architecture information:
[2025-06-04 13:42:49] 2025-06-04 17:42:31,119 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:42:49] 2025-06-04 17:42:31,142 | INFO     | cat /etc/os-release:
[2025-06-04 13:42:49] NAME="CentOS Linux"
[2025-06-04 13:42:49] VERSION="7 (Core)"
[2025-06-04 13:42:49] ID="centos"
[2025-06-04 13:42:49] ID_LIKE="rhel fedora"
[2025-06-04 13:42:49] VERSION_ID="7"
[2025-06-04 13:42:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:42:49] ANSI_COLOR="0;31"
[2025-06-04 13:42:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:42:49] HOME_URL="https://www.centos.org/"
[2025-06-04 13:42:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:42:49] 
[2025-06-04 13:42:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:42:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:42:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:42:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:42:49] 
[2025-06-04 13:42:49] 2025-06-04 17:42:31,143 | INFO     | **************************************
[2025-06-04 13:42:49] 2025-06-04 17:42:31,646 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:42:49] 2025-06-04 17:42:31,752 | INFO     | sufficient remaining disk space (105565388800 B)
[2025-06-04 13:42:49] 2025-06-04 17:42:31,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | INFO     | update_server=False
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:42:49] 2025-06-04 17:42:31,753 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:42:49] 2025-06-04 17:42:31,839 | INFO     | all job control threads have been joined
[2025-06-04 13:42:49] 2025-06-04 17:42:32,142 | INFO     | all payload control threads have been joined
[2025-06-04 13:42:49] 2025-06-04 17:42:32,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:42:49] 2025-06-04 17:42:32,258 | INFO     | aborting loop
[2025-06-04 13:42:49] 2025-06-04 17:42:32,724 | INFO     | all data control threads have been joined
[2025-06-04 13:42:49] 2025-06-04 17:42:32,758 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:32,845 | INFO     | [job] control thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:32,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:42:49] 2025-06-04 17:42:33,146 | INFO     | [payload] control thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,263 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,290 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,347 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,413 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,518 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,730 | INFO     | [data] control thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,851 | INFO     | [job] validate thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:33,993 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:34,187 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:34,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:42:49] 2025-06-04 17:42:34,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:42:49] 2025-06-04 17:42:34,860 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:35,429 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:38,624 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:42,764 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:42:49] 2025-06-04 17:42:43,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:42:49] 2025-06-04 17:42:44,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494923163456)>', '<ExcThread(monitor, started 140494210328320)>']
[2025-06-04 13:42:49] 2025-06-04 17:42:44,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:42:49] 2025-06-04 17:42:44,817 | INFO     | [monitor] control thread has ended
[2025-06-04 13:42:49] 2025-06-04 17:42:49,126 | INFO     | all workflow threads have been joined
[2025-06-04 13:42:49] 2025-06-04 17:42:49,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:42:49] 2025-06-04 17:42:49,126 | INFO     | traces error code: 0
[2025-06-04 13:42:49] 2025-06-04 17:42:49,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:42:49] 2025-06-04 17:42:49,182 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:42:49] 2025-06-04 17:42:49,184 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:42:49] 2025-06-04 17:42:49,186 [wrapper] pilotpid: 50139
[2025-06-04 13:42:49] 2025-06-04 17:42:49,200 [wrapper] Pilot exit status: 0
[2025-06-04 13:42:49] 2025-06-04 17:42:49,276 [wrapper] pandaids: 6679857016
[2025-06-04 13:42:49] 2025-06-04 17:42:49,359 [wrapper] cleanup supervisor_pilot 83061 50142
[2025-06-04 13:42:49] 2025-06-04 17:42:49,361 [wrapper] Test setup, not cleaning
[2025-06-04 13:42:49] 2025-06-04 17:42:49,363 [wrapper] apfmon messages muted
[2025-06-04 13:42:49] 2025-06-04 17:42:49,365 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:42:49] 2025-06-04 17:42:49,366 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:42:49]  *** Error codes and diagnostics ***
[2025-06-04 13:42:49]     "exeErrorCode": 0,
[2025-06-04 13:42:49]     "exeErrorDiag": "",
[2025-06-04 13:42:49]     "pilotErrorCode": 0,
[2025-06-04 13:42:49]     "pilotErrorDiag": "",
[2025-06-04 13:42:49]  *** Listing of results directory ***
[2025-06-04 13:42:49] total 422056
[2025-06-04 13:42:49] -rwx------ 1 boincer umatlas     37140 Jun  4 12:14 runpilot2-wrapper.sh
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 12:14 queuedata.json
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 12:14 pilot3.tar.gz
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas       100 Jun  4 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:42:49] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 12:15 run_atlas
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas       105 Jun  4 12:15 job.xml
[2025-06-04 13:42:49] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:15 start_atlas.sh
[2025-06-04 13:42:49] drwxrwx--x 2 boincer umatlas      4096 Jun  4 12:15 shared
[2025-06-04 13:42:49] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 12:15 input.tar.gz
[2025-06-04 13:42:49] -rw-r--r-- 2 boincer umatlas 222450913 Jun  4 12:15 EVNT.44871834._002216.pool.root.1
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas         0 Jun  4 12:15 boinc_lockfile
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 12:15 pandaJob.out
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas    990989 Jun  4 12:15 agis_schedconf.cvmfs.json
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas   1598969 Jun  4 12:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:42:49] drwx------ 4 boincer umatlas      4096 Jun  4 12:15 pilot3
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 13:40 init_data.xml
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas       529 Jun  4 13:41 boinc_task_state.xml
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas 204233532 Jun  4 13:41 HITS.44871837._102231.pool.root.1
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas      1076 Jun  4 13:42 memory_monitor_summary.json
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas    317148 Jun  4 13:42 log.44871837._102231.job.log.tgz.1
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas        95 Jun  4 13:42 pilot_heartbeat.json
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas      7747 Jun  4 13:42 heartbeat.json
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:42 wrapper_checkpoint.txt
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:42 boinc_mmap_file
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas      4549 Jun  4 13:42 pilotlog.txt
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas    512095 Jun  4 13:42 log.44871837._102231.job.log.1
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas       357 Jun  4 13:42 output.list
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:42 runtime_log
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas    849920 Jun  4 13:42 result.tar.gz
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 13:42 runtime_log.err
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas       658 Jun  4 13:42 eqNNDmOw5g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmd3aKDmlhFB5n.diag
[2025-06-04 13:42:49] -rw-r--r-- 1 boincer umatlas     21431 Jun  4 13:42 stderr.txt
[2025-06-04 13:42:49] HITS file was successfully produced:
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas 204233532 Jun  4 13:41 shared/HITS.pool.root.1
[2025-06-04 13:42:49]  *** Contents of shared directory: ***
[2025-06-04 13:42:49] total 418044
[2025-06-04 13:42:49] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 12:15 start_atlas.sh
[2025-06-04 13:42:49] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 12:15 input.tar.gz
[2025-06-04 13:42:49] -rw-r--r-- 2 boincer umatlas 222450913 Jun  4 12:15 ATLAS.root_0
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas 204233532 Jun  4 13:41 HITS.pool.root.1
[2025-06-04 13:42:49] -rw------- 1 boincer umatlas    849920 Jun  4 13:42 result.tar.gz
13:42:51 (46434): run_atlas exited; CPU time 37872.075978
13:42:51 (46434): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN