Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:21 (44531): wrapper (7.7.26015): starting
11:55:21 (44531): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 11:55:21] Arguments: --nthreads 9
[2025-06-04 11:55:21] Threads: 9
[2025-06-04 11:55:21] Checking for CVMFS
[2025-06-04 11:55:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:55:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:55:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:55:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:55:22] 2.11.2.0 6627 28990 224760 146786 0 69 11264755 18432001 7988 130560 0 75110421 99.467 79543852 31782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:55:22] CVMFS is ok
[2025-06-04 11:55:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:55:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:55:22] Further information can be found at the LHC@home message board.
[2025-06-04 11:55:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:55:22] Checking for apptainer binary...
[2025-06-04 11:55:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:55:22] Running /usr/bin/apptainer --version
[2025-06-04 11:55:22] apptainer version 1.3.2-1.el7
[2025-06-04 11:55:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:55:25] c-210-35-1.aglt2.org
[2025-06-04 11:55:25] apptainer works
[2025-06-04 11:55:25] Set ATHENA_PROC_NUMBER=9
[2025-06-04 11:55:25] Set ATHENA_CORE_NUMBER=9
[2025-06-04 11:55:25] Starting ATLAS job with PandaID=6677976776
[2025-06-04 11:55:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:12:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:12:15]  guid=ef79823c-96b7-4688-8a72-5b7823a45c05
[2025-06-04 13:12:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:12:15]  is_altstaged=None
[2025-06-04 13:12:15]  is_tar=False
[2025-06-04 13:12:15]  lfn=log.45006595._043502.job.log.tgz.1
[2025-06-04 13:12:15]  mtime=0
[2025-06-04 13:12:15]  protocol_id=None
[2025-06-04 13:12:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:12:15]  replicas=None
[2025-06-04 13:12:15]  scope=mc23_13p6TeV
[2025-06-04 13:12:15]  status=None
[2025-06-04 13:12:15]  status_code=0
[2025-06-04 13:12:15]  storage_token=
[2025-06-04 13:12:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677976776/log.45006595._043502.job.log.tgz.1
[2025-06-04 13:12:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/2e/log.45006595._043502.job.log.tgz.1
[2025-06-04 13:12:15]  workdir=None
[2025-06-04 13:12:15] ]
[2025-06-04 13:12:15] 2025-06-04 17:11:49,220 | INFO     | transferring file log.45006595._043502.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677976776/log.45006595._043502.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:12:15] 2025-06-04 17:11:49,220 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677976776/log.45006595._043502.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043502.job
[2025-06-04 13:12:15] 2025-06-04 17:11:49,235 | INFO     | adding to output.list: log.45006595._043502.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/2e/log.45006595._043502.job.log.tg
[2025-06-04 13:12:15] 2025-06-04 17:11:49,236 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:12:15] 2025-06-04 17:11:49,236 | INFO     | summary of transferred files:
[2025-06-04 13:12:15] 2025-06-04 17:11:49,236 | INFO     |  -- lfn=log.45006595._043502.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:12:15] 2025-06-04 17:11:49,236 | INFO     | stage-out finished correctly
[2025-06-04 13:12:15] 2025-06-04 17:11:50,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:12:15] 2025-06-04 17:11:50,577 | WARNING  | process 56823 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:12:15] 2025-06-04 17:11:50,577 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976776/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:12:15] 2025-06-04 17:11:50,747 | INFO     | number of running child processes to parent process 56823: 1
[2025-06-04 13:12:15] 2025-06-04 17:11:50,748 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:12:15] 2025-06-04 17:11:51,672 | INFO     | job 6677976776 has state=finished
[2025-06-04 13:12:15] 2025-06-04 17:11:51,672 | INFO     | preparing for final server update for job 6677976776 in state='finished'
[2025-06-04 13:12:15] 2025-06-04 17:11:51,673 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:12:15] 2025-06-04 17:11:51,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:12:15] 2025-06-04 17:11:51,673 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:12:15] 2025-06-04 17:11:51,673 | INFO     | job 6677976776 has finished - writing final server update
[2025-06-04 13:12:15] 2025-06-04 17:11:51,674 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:12:15] 2025-06-04 17:11:51,678 | INFO     | executing command: lscpu
[2025-06-04 13:12:15] 2025-06-04 17:11:51,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:12:15] 2025-06-04 17:11:53,250 | INFO     | monitor loop #351: job 0:6677976776 is in state 'finished'
[2025-06-04 13:12:15] 2025-06-04 17:11:53,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:12:15] 2025-06-04 17:11:55,046 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:12:15] 2025-06-04 17:11:55,046 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976776/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:12:15] 2025-06-04 17:11:55,047 | INFO     | extracted standard info from prmon json
[2025-06-04 13:12:15] 2025-06-04 17:11:55,047 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:12:15] 2025-06-04 17:11:55,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:12:15] 2025-06-04 17:11:55,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:12:15] 2025-06-04 17:11:55,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:12:15] 2025-06-04 17:11:55,050 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:12:15] 2025-06-04 17:11:55,051 | INFO     | sum of square deviations: 93240818.0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,051 | INFO     | sum of deviations: -3283731625.9999995
[2025-06-04 13:12:15] 2025-06-04 17:11:55,051 | INFO     | mean x: 1749054949.0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,051 | INFO     | mean y: 2567859.343283582
[2025-06-04 13:12:15] 2025-06-04 17:11:55,052 | INFO     | -- intersect: 61600344185.62044
[2025-06-04 13:12:15] 2025-06-04 17:11:55,052 | INFO     | intersect: 61600344185.62044
[2025-06-04 13:12:15] 2025-06-04 17:11:55,052 | INFO     | chi2: 0.04933723009462086
[2025-06-04 13:12:15] 2025-06-04 17:11:55,052 | INFO     | -- intersect: 61600344185.62044
[2025-06-04 13:12:15] 2025-06-04 17:11:55,052 | INFO     | current memory leak: -35.22 B/s (using 67 data points, chi2=0.05)
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | ..............................
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . Timing measurements:
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . get job = 0 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . initial setup = 2 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . payload setup = 22 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . stage-in = 0 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . payload execution = 4492 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . stage-out = 0 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,053 | INFO     | . log creation = 0 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,054 | INFO     | ..............................
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | 
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | job summary report
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | --------------------------------------------------
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | PanDA job id: 6677976776
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | task id: 45006595
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | errors: (none)
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | pilot state: finished 
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | transexitcode: 0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,369 | INFO     | exeerrorcode: 0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | exeerrordiag: 
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | exitcode: 0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | exitmsg: OK
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | cpuconsumptiontime: 34985 s
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | nevents: 400
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | neventsw: 0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | pid: 56823
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | pgrp: 56823
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | corecount: 9
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | event service: False
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | sizes: {0: 2397342, 11: 2397342, 12: 2397576, 21: 2397604, 4517: 2423598, 4518: 2432722, 4519: 2432722, 4524: 2432892}
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | --------------------------------------------------
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | 
[2025-06-04 13:12:15] 2025-06-04 17:11:55,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 13:12:15] 2025-06-04 17:11:55,392 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,393 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | job 6677976776 has completed (purged errors)
[2025-06-04 13:12:15] 2025-06-04 17:11:55,394 | INFO     | overall cleanup function is called
[2025-06-04 13:12:15] 2025-06-04 17:11:56,403 | INFO     | --- collectZombieJob: --- 10, [56823]
[2025-06-04 13:12:15] 2025-06-04 17:11:56,403 | INFO     | zombie collector waiting for pid 56823
[2025-06-04 13:12:15] 2025-06-04 17:11:56,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:12:15] 2025-06-04 17:11:56,403 | INFO     | collected zombie processes
[2025-06-04 13:12:15] 2025-06-04 17:11:56,403 | INFO     | will attempt to kill all subprocesses of pid=56823
[2025-06-04 13:12:15] 2025-06-04 17:11:56,576 | INFO     | process IDs to be killed: [56823] (in reverse order)
[2025-06-04 13:12:15] 2025-06-04 17:11:56,645 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:12:15] 2025-06-04 17:11:56,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:12:15] 2025-06-04 17:11:56,651 | INFO     | did not find any defunct processes belonging to 56823
[2025-06-04 13:12:15] 2025-06-04 17:11:56,656 | INFO     | did not find any defunct processes belonging to 56823
[2025-06-04 13:12:15] 2025-06-04 17:11:56,656 | INFO     | ready for new job
[2025-06-04 13:12:15] 2025-06-04 17:11:56,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:12:15] 2025-06-04 17:11:56,657 | INFO     | **************************************
[2025-06-04 13:12:15] 2025-06-04 17:11:56,658 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:12:15] 2025-06-04 17:11:56,658 | INFO     | **************************************
[2025-06-04 13:12:15] 2025-06-04 17:11:56,658 | INFO     | 
[2025-06-04 13:12:15] 2025-06-04 17:11:56,660 | INFO     | architecture information:
[2025-06-04 13:12:15] 2025-06-04 17:11:56,660 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:12:15] 2025-06-04 17:11:56,672 | INFO     | cat /etc/os-release:
[2025-06-04 13:12:15] NAME="CentOS Linux"
[2025-06-04 13:12:15] VERSION="7 (Core)"
[2025-06-04 13:12:15] ID="centos"
[2025-06-04 13:12:15] ID_LIKE="rhel fedora"
[2025-06-04 13:12:15] VERSION_ID="7"
[2025-06-04 13:12:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:12:15] ANSI_COLOR="0;31"
[2025-06-04 13:12:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:12:15] HOME_URL="https://www.centos.org/"
[2025-06-04 13:12:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:12:15] 
[2025-06-04 13:12:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:12:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:12:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:12:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:12:15] 
[2025-06-04 13:12:15] 2025-06-04 17:11:56,673 | INFO     | **************************************
[2025-06-04 13:12:15] 2025-06-04 17:11:57,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 13:12:15] 2025-06-04 17:11:57,186 | INFO     | sufficient remaining disk space (57614008320 B)
[2025-06-04 13:12:15] 2025-06-04 17:11:57,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:12:15] 2025-06-04 17:11:57,186 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:12:15] 2025-06-04 17:11:57,186 | INFO     | update_server=False
[2025-06-04 13:12:15] 2025-06-04 17:11:57,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:12:15] 2025-06-04 17:11:57,186 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:12:15] 2025-06-04 17:11:57,187 | INFO     | aborting loop
[2025-06-04 13:12:15] 2025-06-04 17:11:57,225 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:12:15] 2025-06-04 17:11:57,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:12:15] 2025-06-04 17:11:57,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:12:15] 2025-06-04 17:11:57,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:12:15] 2025-06-04 17:11:57,556 | INFO     | all data control threads have been joined
[2025-06-04 13:12:15] 2025-06-04 17:11:58,148 | INFO     | all payload control threads have been joined
[2025-06-04 13:12:15] 2025-06-04 17:11:58,161 | INFO     | all job control threads have been joined
[2025-06-04 13:12:15] 2025-06-04 17:11:58,191 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:58,192 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:58,382 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:58,496 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:58,532 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:58,561 | INFO     | [data] control thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:58,783 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:59,153 | INFO     | [payload] control thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:59,167 | INFO     | [job] control thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:59,224 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:59,304 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:59,486 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:11:59,495 | INFO     | [job] validate thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:12:00,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:12:15] 2025-06-04 17:12:00,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:12:15] 2025-06-04 17:12:01,166 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:12:04,599 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:12:08,217 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:12:15] 2025-06-04 17:12:09,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:12:15] 2025-06-04 17:12:10,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394685482816)>', '<ExcThread(monitor, started 140394394269440)>']
[2025-06-04 13:12:15] 2025-06-04 17:12:10,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:12:15] 2025-06-04 17:12:10,276 | INFO     | [monitor] control thread has ended
[2025-06-04 13:12:15] 2025-06-04 17:12:15,183 | INFO     | all workflow threads have been joined
[2025-06-04 13:12:15] 2025-06-04 17:12:15,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:12:15] 2025-06-04 17:12:15,184 | INFO     | traces error code: 0
[2025-06-04 13:12:15] 2025-06-04 17:12:15,184 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:12:15] 2025-06-04 17:12:15,359 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:12:15] 2025-06-04 17:12:15,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:12:15] 2025-06-04 17:12:15,365 [wrapper] pilotpid: 48180
[2025-06-04 13:12:15] 2025-06-04 17:12:15,368 [wrapper] Pilot exit status: 0
[2025-06-04 13:12:15] 2025-06-04 17:12:15,378 [wrapper] pandaids: 6677976776
[2025-06-04 13:12:15] 2025-06-04 17:12:15,419 [wrapper] cleanup supervisor_pilot 190588 48181
[2025-06-04 13:12:15] 2025-06-04 17:12:15,422 [wrapper] Test setup, not cleaning
[2025-06-04 13:12:15] 2025-06-04 17:12:15,424 [wrapper] apfmon messages muted
[2025-06-04 13:12:15] 2025-06-04 17:12:15,428 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:12:15] 2025-06-04 17:12:15,430 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:12:15]  *** Error codes and diagnostics ***
[2025-06-04 13:12:15]     "exeErrorCode": 0,
[2025-06-04 13:12:15]     "exeErrorDiag": "",
[2025-06-04 13:12:15]     "pilotErrorCode": 0,
[2025-06-04 13:12:15]     "pilotErrorDiag": "",
[2025-06-04 13:12:15]  *** Listing of results directory ***
[2025-06-04 13:12:15] total 395612
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-04 13:12:15] -rwx------ 1 boincer umatlas     37140 Jun  3 15:15 runpilot2-wrapper.sh
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 15:15 queuedata.json
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:12:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:55 run_atlas
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:55 job.xml
[2025-06-04 13:12:15] -rw-r--r-- 2 boincer umatlas 216871098 Jun  4 11:55 EVNT.45006593._001744.pool.root.1
[2025-06-04 13:12:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:55 start_atlas.sh
[2025-06-04 13:12:15] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:55 shared
[2025-06-04 13:12:15] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 11:55 input.tar.gz
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:55 boinc_lockfile
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 11:55 pandaJob.out
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas    990989 Jun  4 11:55 agis_schedconf.cvmfs.json
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas   1598969 Jun  4 11:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:12:15] drwx------ 4 boincer umatlas      4096 Jun  4 11:55 pilot3
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas      6353 Jun  4 13:09 init_data.xml
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas 182872131 Jun  4 13:11 HITS.45006595._043502.pool.root.1
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas       529 Jun  4 13:11 boinc_task_state.xml
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas      1066 Jun  4 13:11 memory_monitor_summary.json
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas    311860 Jun  4 13:11 log.45006595._043502.job.log.tgz.1
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas      7745 Jun  4 13:11 heartbeat.json
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas        95 Jun  4 13:11 pilot_heartbeat.json
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:12 boinc_mmap_file
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:12 wrapper_checkpoint.txt
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas      4425 Jun  4 13:12 pilotlog.txt
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas    451098 Jun  4 13:12 log.45006595._043502.job.log.1
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas       357 Jun  4 13:12 output.list
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:12 runtime_log
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas    778240 Jun  4 13:12 result.tar.gz
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas       660 Jun  4 13:12 vjPNDmMHmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmaiZKDm3LRHIo.diag
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 13:12 runtime_log.err
[2025-06-04 13:12:15] -rw-r--r-- 1 boincer umatlas     21272 Jun  4 13:12 stderr.txt
[2025-06-04 13:12:15] HITS file was successfully produced:
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas 182872131 Jun  4 13:11 shared/HITS.pool.root.1
[2025-06-04 13:12:15]  *** Contents of shared directory: ***
[2025-06-04 13:12:15] total 391664
[2025-06-04 13:12:15] -rw-r--r-- 2 boincer umatlas 216871098 Jun  4 11:55 ATLAS.root_0
[2025-06-04 13:12:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:55 start_atlas.sh
[2025-06-04 13:12:15] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 11:55 input.tar.gz
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas 182872131 Jun  4 13:11 HITS.pool.root.1
[2025-06-04 13:12:15] -rw------- 1 boincer umatlas    778240 Jun  4 13:12 result.tar.gz
13:12:17 (44531): run_atlas exited; CPU time 35005.282556
13:12:17 (44531): called boinc_finish(0)

</stderr_txt>
]]>

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