Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:55:23 (2139): wrapper (7.7.26015): starting
11:55:23 (2139): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:55:23] Arguments: --nthreads 8
[2025-06-04 11:55:23] Threads: 8
[2025-06-04 11:55:23] Checking for CVMFS
[2025-06-04 11:55:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:55:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:55:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:55:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:55:23] 2.11.2.0 39063 13044 339456 146786 2 739 16840562 18432000 8554 130560 1 114236239 99.288 154266321 49011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:55:23] CVMFS is ok
[2025-06-04 11:55:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:55:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:55:23] Further information can be found at the LHC@home message board.
[2025-06-04 11:55:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:55:23] Checking for apptainer binary...
[2025-06-04 11:55:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:55:23] Running /usr/bin/apptainer --version
[2025-06-04 11:55:23] apptainer version 1.3.2-1.el7
[2025-06-04 11:55:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:55:24] c-212-9.aglt2.org
[2025-06-04 11:55:24] apptainer works
[2025-06-04 11:55:24] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:55:24] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:55:24] Starting ATLAS job with PandaID=6667433674
[2025-06-04 11:55:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:17:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:17:46]  mtime=0
[2025-06-04 13:17:46]  protocol_id=None
[2025-06-04 13:17:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:17:46]  replicas=None
[2025-06-04 13:17:46]  scope=mc23_13p6TeV
[2025-06-04 13:17:46]  status=None
[2025-06-04 13:17:46]  status_code=0
[2025-06-04 13:17:46]  storage_token=
[2025-06-04 13:17:46]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6667433674/log.44871837._071898.job.log.tgz.1
[2025-06-04 13:17:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/a8/log.44871837._071898.job.log.tgz.1
[2025-06-04 13:17:46]  workdir=None
[2025-06-04 13:17:46] ]
[2025-06-04 13:17:46] 2025-06-04 17:17:17,087 | INFO     | transferring file log.44871837._071898.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6667433674/log.44871837._071898.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:17:46] 2025-06-04 17:17:17,088 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6667433674/log.44871837._071898.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._071898.job
[2025-06-04 13:17:46] 2025-06-04 17:17:17,116 | INFO     | adding to output.list: log.44871837._071898.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/a8/log.44871837._071898.job.log.tg
[2025-06-04 13:17:46] 2025-06-04 17:17:17,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:17:46] 2025-06-04 17:17:17,116 | INFO     | summary of transferred files:
[2025-06-04 13:17:46] 2025-06-04 17:17:17,116 | INFO     |  -- lfn=log.44871837._071898.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:17:46] 2025-06-04 17:17:17,117 | INFO     | stage-out finished correctly
[2025-06-04 13:17:46] 2025-06-04 17:17:18,178 | WARNING  | process 22333 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:17:46] 2025-06-04 17:17:18,178 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667433674/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:17:46] 2025-06-04 17:17:18,301 | INFO     | number of running child processes to parent process 22333: 1
[2025-06-04 13:17:46] 2025-06-04 17:17:18,301 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:17:46] 2025-06-04 17:17:20,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:17:46] 2025-06-04 17:17:20,803 | INFO     | monitor loop #370: job 0:6667433674 is in state 'finished'
[2025-06-04 13:17:46] 2025-06-04 17:17:20,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:17:46] 2025-06-04 17:17:22,849 | INFO     | job 6667433674 has state=finished
[2025-06-04 13:17:46] 2025-06-04 17:17:22,850 | INFO     | preparing for final server update for job 6667433674 in state='finished'
[2025-06-04 13:17:46] 2025-06-04 17:17:22,850 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:17:46] 2025-06-04 17:17:22,850 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:17:46] 2025-06-04 17:17:22,850 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:17:46] 2025-06-04 17:17:22,850 | INFO     | job 6667433674 has finished - writing final server update
[2025-06-04 13:17:46] 2025-06-04 17:17:22,850 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:17:46] 2025-06-04 17:17:22,853 | INFO     | executing command: lscpu
[2025-06-04 13:17:46] 2025-06-04 17:17:22,880 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:17:46] 2025-06-04 17:17:23,306 | INFO     | monitor loop #371: job 0:6667433674 is in state 'finished'
[2025-06-04 13:17:46] 2025-06-04 17:17:23,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,809 | INFO     | monitor loop #372: job 0:6667433674 is in state 'finished'
[2025-06-04 13:17:46] 2025-06-04 17:17:25,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,858 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:17:46] 2025-06-04 17:17:25,858 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6667433674/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,858 | INFO     | extracted standard info from prmon json
[2025-06-04 13:17:46] 2025-06-04 17:17:25,858 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:17:46] 2025-06-04 17:17:25,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:17:46] 2025-06-04 17:17:25,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:17:46] 2025-06-04 17:17:25,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | sum of deviations: -687088536.5000001
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | mean x: 1749055079.5
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | mean y: 2501691.2027027025
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | -- intersect: 9568315460.25016
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | intersect: 9568315460.25016
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | chi2: 0.003726977397317525
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | -- intersect: 9568315460.25016
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | current memory leak: -5.47 B/s (using 74 data points, chi2=0.00)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | ..............................
[2025-06-04 13:17:46] 2025-06-04 17:17:25,860 | INFO     | . Timing measurements:
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . get job = 0 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . initial setup = 2 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . payload setup = 3 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . stage-in = 0 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . payload execution = 4886 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . stage-out = 0 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | . log creation = 0 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,861 | INFO     | ..............................
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | 
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | job summary report
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | --------------------------------------------------
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | PanDA job id: 6667433674
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | task id: 44871837
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | errors: (none)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | pilot state: finished 
[2025-06-04 13:17:46] 2025-06-04 17:17:25,898 | INFO     | transexitcode: 0
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | exeerrorcode: 0
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | exeerrordiag: 
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | exitcode: 0
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | exitmsg: OK
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | cpuconsumptiontime: 34871 s
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | nevents: 400
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | neventsw: 0
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | pid: 22333
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | pgrp: 22333
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | corecount: 8
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | event service: False
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | sizes: {0: 2397392, 2: 2397598, 10: 2397626, 4892: 2423875, 4893: 2423874, 4894: 2432871, 4898: 2433055, 4903: 2433225}
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | --------------------------------------------------
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | 
[2025-06-04 13:17:46] 2025-06-04 17:17:25,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | job 6667433674 has completed (purged errors)
[2025-06-04 13:17:46] 2025-06-04 17:17:25,916 | INFO     | overall cleanup function is called
[2025-06-04 13:17:46] 2025-06-04 17:17:26,922 | INFO     | --- collectZombieJob: --- 10, [22333]
[2025-06-04 13:17:46] 2025-06-04 17:17:26,923 | INFO     | zombie collector waiting for pid 22333
[2025-06-04 13:17:46] 2025-06-04 17:17:26,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:17:46] 2025-06-04 17:17:26,923 | INFO     | collected zombie processes
[2025-06-04 13:17:46] 2025-06-04 17:17:26,923 | INFO     | will attempt to kill all subprocesses of pid=22333
[2025-06-04 13:17:46] 2025-06-04 17:17:27,059 | INFO     | process IDs to be killed: [22333] (in reverse order)
[2025-06-04 13:17:46] 2025-06-04 17:17:27,137 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:17:46] 2025-06-04 17:17:27,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:17:46] 2025-06-04 17:17:27,144 | INFO     | did not find any defunct processes belonging to 22333
[2025-06-04 13:17:46] 2025-06-04 17:17:27,150 | INFO     | did not find any defunct processes belonging to 22333
[2025-06-04 13:17:46] 2025-06-04 17:17:27,150 | INFO     | ready for new job
[2025-06-04 13:17:46] 2025-06-04 17:17:27,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:17:46] 2025-06-04 17:17:27,151 | INFO     | **************************************
[2025-06-04 13:17:46] 2025-06-04 17:17:27,151 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:17:46] 2025-06-04 17:17:27,151 | INFO     | **************************************
[2025-06-04 13:17:46] 2025-06-04 17:17:27,151 | INFO     | 
[2025-06-04 13:17:46] 2025-06-04 17:17:27,154 | INFO     | architecture information:
[2025-06-04 13:17:46] 2025-06-04 17:17:27,154 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:17:46] 2025-06-04 17:17:27,164 | INFO     | cat /etc/os-release:
[2025-06-04 13:17:46] NAME="CentOS Linux"
[2025-06-04 13:17:46] VERSION="7 (Core)"
[2025-06-04 13:17:46] ID="centos"
[2025-06-04 13:17:46] ID_LIKE="rhel fedora"
[2025-06-04 13:17:46] VERSION_ID="7"
[2025-06-04 13:17:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:17:46] ANSI_COLOR="0;31"
[2025-06-04 13:17:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:17:46] HOME_URL="https://www.centos.org/"
[2025-06-04 13:17:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:17:46] 
[2025-06-04 13:17:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:17:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:17:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:17:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:17:46] 
[2025-06-04 13:17:46] 2025-06-04 17:17:27,164 | INFO     | **************************************
[2025-06-04 13:17:46] 2025-06-04 17:17:27,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 13:17:46] 2025-06-04 17:17:27,682 | INFO     | sufficient remaining disk space (104689827840 B)
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | INFO     | update_server=False
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:17:46] 2025-06-04 17:17:27,683 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:17:46] 2025-06-04 17:17:27,684 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:17:46] 2025-06-04 17:17:27,684 | INFO     | aborting loop
[2025-06-04 13:17:46] 2025-06-04 17:17:27,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:17:46] 2025-06-04 17:17:27,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:17:46] 2025-06-04 17:17:27,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:17:46] 2025-06-04 17:17:27,860 | INFO     | all job control threads have been joined
[2025-06-04 13:17:46] 2025-06-04 17:17:27,965 | INFO     | all payload control threads have been joined
[2025-06-04 13:17:46] 2025-06-04 17:17:28,055 | INFO     | all data control threads have been joined
[2025-06-04 13:17:46] 2025-06-04 17:17:28,688 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:28,689 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:28,689 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:28,864 | INFO     | [job] control thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:28,940 | INFO     | [job] validate thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:28,947 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:28,967 | INFO     | [payload] control thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,048 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,060 | INFO     | [data] control thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,119 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,543 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,697 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:29,786 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:31,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:17:46] 2025-06-04 17:17:35,149 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:37,744 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:17:46] 2025-06-04 17:17:38,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:17:46] 2025-06-04 17:17:40,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447533737792)>', '<ExcThread(monitor, started 140446957295360)>']
[2025-06-04 13:17:46] 2025-06-04 17:17:40,742 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:17:46] 2025-06-04 17:17:40,742 | INFO     | [monitor] control thread has ended
[2025-06-04 13:17:46] 2025-06-04 17:17:45,731 | INFO     | all workflow threads have been joined
[2025-06-04 13:17:46] 2025-06-04 17:17:45,731 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:17:46] 2025-06-04 17:17:45,732 | INFO     | traces error code: 0
[2025-06-04 13:17:46] 2025-06-04 17:17:45,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:17:46] 2025-06-04 17:17:45,793 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:17:46] 2025-06-04 17:17:45,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:17:46] 2025-06-04 17:17:45,795 [wrapper] pilotpid: 8993
[2025-06-04 13:17:46] 2025-06-04 17:17:45,796 [wrapper] Pilot exit status: 0
[2025-06-04 13:17:46] 2025-06-04 17:17:45,800 [wrapper] pandaids: 6667433674
[2025-06-04 13:17:46] 2025-06-04 17:17:45,883 [wrapper] cleanup supervisor_pilot 92045 8994
[2025-06-04 13:17:46] 2025-06-04 17:17:45,919 [wrapper] Test setup, not cleaning
[2025-06-04 13:17:46] 2025-06-04 17:17:45,968 [wrapper] apfmon messages muted
[2025-06-04 13:17:46] 2025-06-04 17:17:46,017 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:17:46] 2025-06-04 17:17:46,066 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:17:46]  *** Error codes and diagnostics ***
[2025-06-04 13:17:46]     "exeErrorCode": 0,
[2025-06-04 13:17:46]     "exeErrorDiag": "",
[2025-06-04 13:17:46]     "pilotErrorCode": 0,
[2025-06-04 13:17:46]     "pilotErrorDiag": "",
[2025-06-04 13:17:46]  *** Listing of results directory ***
[2025-06-04 13:17:46] total 420576
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas    495897 May 27 14:37 pilot3.tar.gz
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas      5111 May 27 14:55 queuedata.json
[2025-06-04 13:17:46] -rwx------ 1 boincer umatlas     37140 May 27 14:55 runpilot2-wrapper.sh
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:17:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:55 run_atlas
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:55 job.xml
[2025-06-04 13:17:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:55 start_atlas.sh
[2025-06-04 13:17:46] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:55 shared
[2025-06-04 13:17:46] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 11:55 input.tar.gz
[2025-06-04 13:17:46] -rw-r--r-- 2 boincer umatlas 227813900 Jun  4 11:55 EVNT.44871834._002822.pool.root.1
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:55 boinc_lockfile
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 11:55 pandaJob.out
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas    990989 Jun  4 11:55 agis_schedconf.cvmfs.json
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas   1598969 Jun  4 11:55 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:17:46] drwx------ 4 boincer umatlas      4096 Jun  4 11:55 pilot3
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas      6302 Jun  4 13:09 init_data.xml
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas        95 Jun  4 13:16 pilot_heartbeat.json
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas 197426428 Jun  4 13:16 HITS.44871837._071898.pool.root.1
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas       529 Jun  4 13:16 boinc_task_state.xml
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas      1070 Jun  4 13:17 memory_monitor_summary.json
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas    311157 Jun  4 13:17 log.44871837._071898.job.log.tgz.1
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas      7726 Jun  4 13:17 heartbeat.json
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:17 boinc_mmap_file
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:17 wrapper_checkpoint.txt
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas      4549 Jun  4 13:17 pilotlog.txt
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas    484461 Jun  4 13:17 log.44871837._071898.job.log.1
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas       357 Jun  4 13:17 output.list
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:17 runtime_log
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas    819200 Jun  4 13:17 result.tar.gz
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 13:17 runtime_log.err
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas       656 Jun  4 13:17 NN3LDmjdEe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmmGSKDmehuGnm.diag
[2025-06-04 13:17:46] -rw-r--r-- 1 boincer umatlas     21646 Jun  4 13:17 stderr.txt
[2025-06-04 13:17:46] HITS file was successfully produced:
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas 197426428 Jun  4 13:16 shared/HITS.pool.root.1
[2025-06-04 13:17:46]  *** Contents of shared directory: ***
[2025-06-04 13:17:46] total 416600
[2025-06-04 13:17:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:55 start_atlas.sh
[2025-06-04 13:17:46] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 11:55 input.tar.gz
[2025-06-04 13:17:46] -rw-r--r-- 2 boincer umatlas 227813900 Jun  4 11:55 ATLAS.root_0
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas 197426428 Jun  4 13:16 HITS.pool.root.1
[2025-06-04 13:17:46] -rw------- 1 boincer umatlas    819200 Jun  4 13:17 result.tar.gz
13:17:47 (2139): run_atlas exited; CPU time 34784.820272
13:17:47 (2139): called boinc_finish(0)

</stderr_txt>
]]>

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