Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:43:05 (18664): wrapper (7.7.26015): starting
11:43:05 (18664): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:43:05] Arguments: --nthreads 8
[2025-06-04 11:43:05] Threads: 8
[2025-06-04 11:43:05] Checking for CVMFS
[2025-06-04 11:43:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:43:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:43:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:43:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:43:06] 2.11.2.0 2924 15851 101280 146786 2 1 17062545 20275200 1 130560 0 7213759 99.958 3077821 4778 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:43:06] CVMFS is ok
[2025-06-04 11:43:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:43:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:43:06] Further information can be found at the LHC@home message board.
[2025-06-04 11:43:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:43:06] Checking for apptainer binary...
[2025-06-04 11:43:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:43:06] Running /usr/bin/apptainer --version
[2025-06-04 11:43:06] apptainer version 1.3.2-1.el7
[2025-06-04 11:43:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:43:08] c-204-30.aglt2.org
[2025-06-04 11:43:08] apptainer works
[2025-06-04 11:43:08] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:43:08] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:43:08] Starting ATLAS job with PandaID=6668235182
[2025-06-04 11:43:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:29:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:29:07] 2025-06-04 18:28:49,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:29:07] 2025-06-04 18:28:51,941 | INFO     | monitor loop #729: job 0:6668235182 is in state 'finished'
[2025-06-04 14:29:07] 2025-06-04 18:28:51,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,444 | INFO     | monitor loop #730: job 0:6668235182 is in state 'finished'
[2025-06-04 14:29:07] 2025-06-04 18:28:54,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,693 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 14:29:07] 2025-06-04 18:28:54,694 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668235182/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,695 | INFO     | extracted standard info from prmon json
[2025-06-04 14:29:07] 2025-06-04 18:28:54,695 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:29:07] 2025-06-04 18:28:54,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:29:07] 2025-06-04 18:28:54,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:29:07] 2025-06-04 18:28:54,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:29:07] 2025-06-04 18:28:54,699 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:29:07] 2025-06-04 18:28:54,700 | INFO     | sum of square deviations: 1318277740.5
[2025-06-04 14:29:07] 2025-06-04 18:28:54,701 | INFO     | sum of deviations: 7405877965.499999
[2025-06-04 14:29:07] 2025-06-04 18:28:54,701 | INFO     | mean x: 1749056751.5
[2025-06-04 14:29:07] 2025-06-04 18:28:54,701 | INFO     | mean y: 2508492.0185185187
[2025-06-04 14:29:07] 2025-06-04 18:28:54,701 | INFO     | -- intersect: -9823418517.436935
[2025-06-04 14:29:07] 2025-06-04 18:28:54,701 | INFO     | intersect: -9823418517.436935
[2025-06-04 14:29:07] 2025-06-04 18:28:54,701 | INFO     | chi2: 1.6087765914518064
[2025-06-04 14:29:07] 2025-06-04 18:28:54,702 | INFO     | sum of square deviations: 1199940638.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | sum of deviations: 7189156952.000006
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | mean x: 1749056599.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | mean y: 2508212.9171974524
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | -- intersect: -10476545508.523926
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | intersect: -10476545508.523926
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | chi2: 1.6099318356448828
[2025-06-04 14:29:07] 2025-06-04 18:28:54,703 | INFO     | current chi2=1.6099318356448828 (change=-0.07180886390408737 %)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,704 | INFO     | right removable region: 156
[2025-06-04 14:29:07] 2025-06-04 18:28:54,704 | INFO     | sum of square deviations: 1199940638.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,705 | INFO     | sum of deviations: -17187973172.000004
[2025-06-04 14:29:07] 2025-06-04 18:28:54,705 | INFO     | mean x: 1749056904.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,705 | INFO     | mean y: 2539730.5222929935
[2025-06-04 14:29:07] 2025-06-04 18:28:54,705 | INFO     | -- intersect: 25056065038.541225
[2025-06-04 14:29:07] 2025-06-04 18:28:54,705 | INFO     | intersect: 25056065038.541225
[2025-06-04 14:29:07] 2025-06-04 18:28:54,705 | INFO     | chi2: 0.1225161581336786
[2025-06-04 14:29:07] 2025-06-04 18:28:54,706 | INFO     | current chi2=0.1225161581336786 (change=92.38451387317139 %)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,706 | INFO     | sum of square deviations: 1088905998.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,707 | INFO     | sum of deviations: -15990494189.000002
[2025-06-04 14:29:07] 2025-06-04 18:28:54,707 | INFO     | mean x: 1749057056.5
[2025-06-04 14:29:07] 2025-06-04 18:28:54,707 | INFO     | mean y: 2538008.9078947366
[2025-06-04 14:29:07] 2025-06-04 18:28:54,707 | INFO     | -- intersect: 25687295691.90552
[2025-06-04 14:29:07] 2025-06-04 18:28:54,707 | INFO     | intersect: 25687295691.90552
[2025-06-04 14:29:07] 2025-06-04 18:28:54,707 | INFO     | chi2: 0.10701827973061784
[2025-06-04 14:29:07] 2025-06-04 18:28:54,708 | INFO     | current chi2=0.10701827973061784 (change=12.649660778744684 %)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,708 | INFO     | left removable region: 20
[2025-06-04 14:29:07] 2025-06-04 18:28:54,708 | INFO     | sum of square deviations: 779958810.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,709 | INFO     | sum of deviations: -5568748133.0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,709 | INFO     | mean x: 1749057178.5
[2025-06-04 14:29:07] 2025-06-04 18:28:54,709 | INFO     | mean y: 2522646.0588235296
[2025-06-04 14:29:07] 2025-06-04 18:28:54,709 | INFO     | -- intersect: 12490437100.51844
[2025-06-04 14:29:07] 2025-06-04 18:28:54,709 | INFO     | intersect: 12490437100.51844
[2025-06-04 14:29:07] 2025-06-04 18:28:54,709 | INFO     | chi2: 0.05875747239920436
[2025-06-04 14:29:07] 2025-06-04 18:28:54,710 | INFO     | -- intersect: 12490437100.51844
[2025-06-04 14:29:07] 2025-06-04 18:28:54,710 | INFO     | current memory leak: -7.14 B/s (using 136 data points, chi2=0.06)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,710 | INFO     | ..............................
[2025-06-04 14:29:07] 2025-06-04 18:28:54,710 | INFO     | . Timing measurements:
[2025-06-04 14:29:07] 2025-06-04 18:28:54,710 | INFO     | . get job = 0 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,710 | INFO     | . initial setup = 2 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,711 | INFO     | . payload setup = 12 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,711 | INFO     | . stage-in = 0 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,711 | INFO     | . payload execution = 9884 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,711 | INFO     | . stage-out = 0 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,711 | INFO     | . log creation = 0 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,711 | INFO     | ..............................
[2025-06-04 14:29:07] 2025-06-04 18:28:54,804 | INFO     | 
[2025-06-04 14:29:07] 2025-06-04 18:28:54,805 | INFO     | job summary report
[2025-06-04 14:29:07] 2025-06-04 18:28:54,805 | INFO     | --------------------------------------------------
[2025-06-04 14:29:07] 2025-06-04 18:28:54,805 | INFO     | PanDA job id: 6668235182
[2025-06-04 14:29:07] 2025-06-04 18:28:54,805 | INFO     | task id: 44871837
[2025-06-04 14:29:07] 2025-06-04 18:28:54,805 | INFO     | errors: (none)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | pilot state: finished 
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | transexitcode: 0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | exeerrorcode: 0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | exeerrordiag: 
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | exitcode: 0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | exitmsg: OK
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | cpuconsumptiontime: 73624 s
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | nevents: 400
[2025-06-04 14:29:07] 2025-06-04 18:28:54,806 | INFO     | neventsw: 0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | pid: 28744
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | pgrp: 28744
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | corecount: 8
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | event service: False
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | sizes: {0: 2396513, 1: 2397369, 7: 2397575, 12: 2397603, 9900: 2425984, 9902: 2434925, 9903: 2435109, 9911: 2435279}
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | --------------------------------------------------
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | 
[2025-06-04 14:29:07] 2025-06-04 18:28:54,807 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 14:29:07] 2025-06-04 18:28:54,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,838 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,839 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:29:07] 2025-06-04 18:28:54,839 | INFO     | job 6668235182 has completed (purged errors)
[2025-06-04 14:29:07] 2025-06-04 18:28:54,840 | INFO     | overall cleanup function is called
[2025-06-04 14:29:07] 2025-06-04 18:28:55,848 | INFO     | --- collectZombieJob: --- 10, [28744]
[2025-06-04 14:29:07] 2025-06-04 18:28:55,848 | INFO     | zombie collector waiting for pid 28744
[2025-06-04 14:29:07] 2025-06-04 18:28:55,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:29:07] 2025-06-04 18:28:55,849 | INFO     | collected zombie processes
[2025-06-04 14:29:07] 2025-06-04 18:28:55,849 | INFO     | will attempt to kill all subprocesses of pid=28744
[2025-06-04 14:29:07] 2025-06-04 18:28:55,942 | INFO     | process IDs to be killed: [28744] (in reverse order)
[2025-06-04 14:29:07] 2025-06-04 18:28:56,000 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:29:07] 2025-06-04 18:28:56,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:29:07] 2025-06-04 18:28:56,005 | INFO     | did not find any defunct processes belonging to 28744
[2025-06-04 14:29:07] 2025-06-04 18:28:56,008 | INFO     | did not find any defunct processes belonging to 28744
[2025-06-04 14:29:07] 2025-06-04 18:28:56,008 | INFO     | ready for new job
[2025-06-04 14:29:07] 2025-06-04 18:28:56,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:29:07] 2025-06-04 18:28:56,011 | INFO     | **************************************
[2025-06-04 14:29:07] 2025-06-04 18:28:56,011 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:29:07] 2025-06-04 18:28:56,012 | INFO     | **************************************
[2025-06-04 14:29:07] 2025-06-04 18:28:56,012 | INFO     | 
[2025-06-04 14:29:07] 2025-06-04 18:28:56,012 | INFO     | architecture information:
[2025-06-04 14:29:07] 2025-06-04 18:28:56,013 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:29:07] 2025-06-04 18:28:56,031 | INFO     | cat /etc/os-release:
[2025-06-04 14:29:07] NAME="CentOS Linux"
[2025-06-04 14:29:07] VERSION="7 (Core)"
[2025-06-04 14:29:07] ID="centos"
[2025-06-04 14:29:07] ID_LIKE="rhel fedora"
[2025-06-04 14:29:07] VERSION_ID="7"
[2025-06-04 14:29:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:29:07] ANSI_COLOR="0;31"
[2025-06-04 14:29:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:29:07] HOME_URL="https://www.centos.org/"
[2025-06-04 14:29:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:29:07] 
[2025-06-04 14:29:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:29:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:29:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:29:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:29:07] 
[2025-06-04 14:29:07] 2025-06-04 18:28:56,031 | INFO     | **************************************
[2025-06-04 14:29:07] 2025-06-04 18:28:56,535 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 14:29:07] 2025-06-04 18:28:56,555 | INFO     | sufficient remaining disk space (18566086656 B)
[2025-06-04 14:29:07] 2025-06-04 18:28:56,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:29:07] 2025-06-04 18:28:56,556 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:29:07] 2025-06-04 18:28:56,556 | INFO     | update_server=False
[2025-06-04 14:29:07] 2025-06-04 18:28:56,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:29:07] 2025-06-04 18:28:56,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:29:07] 2025-06-04 18:28:56,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:29:07] 2025-06-04 18:28:56,948 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 14:29:07] 2025-06-04 18:28:56,948 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 14:29:07] 2025-06-04 18:28:56,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:29:07] 2025-06-04 18:28:56,948 | INFO     | will abort loop
[2025-06-04 14:29:07] 2025-06-04 18:28:57,174 | INFO     | all job control threads have been joined
[2025-06-04 14:29:07] 2025-06-04 18:28:57,492 | INFO     | PID=22310 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 14:29:07] 2025-06-04 18:28:57,493 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:29:07] 2025-06-04 18:28:57,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:29:07] 2025-06-04 18:28:57,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:29:07] 2025-06-04 18:28:57,554 | INFO     | all data control threads have been joined
[2025-06-04 14:29:07] 2025-06-04 18:28:57,562 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:57,563 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:57,572 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:57,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:57,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:29:07] 2025-06-04 18:28:57,856 | INFO     | [job] validate thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:57,954 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:57,980 | INFO     | all payload control threads have been joined
[2025-06-04 14:29:07] 2025-06-04 18:28:58,164 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,180 | INFO     | [job] control thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,286 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,560 | INFO     | [data] control thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,628 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,783 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,795 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,795 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:28:58,986 | INFO     | [payload] control thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:29:01,770 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:29:07] 2025-06-04 18:29:02,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412663600960)>', '<ExcThread(monitor, started 140412362659584)>']
[2025-06-04 14:29:07] 2025-06-04 18:29:02,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:29:07] 2025-06-04 18:29:02,517 | INFO     | [monitor] control thread has ended
[2025-06-04 14:29:07] 2025-06-04 18:29:07,215 | INFO     | all workflow threads have been joined
[2025-06-04 14:29:07] 2025-06-04 18:29:07,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:29:07] 2025-06-04 18:29:07,223 | INFO     | traces error code: 0
[2025-06-04 14:29:07] 2025-06-04 18:29:07,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:29:07] 2025-06-04 18:29:07,349 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:29:07] 2025-06-04 18:29:07,352 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:29:07] 2025-06-04 18:29:07,354 [wrapper] pilotpid: 22310
[2025-06-04 14:29:07] 2025-06-04 18:29:07,357 [wrapper] Pilot exit status: 0
[2025-06-04 14:29:07] 2025-06-04 18:29:07,373 [wrapper] pandaids: 6668235182
[2025-06-04 14:29:07] 2025-06-04 18:29:07,411 [wrapper] cleanup supervisor_pilot 16962 22311
[2025-06-04 14:29:07] 2025-06-04 18:29:07,415 [wrapper] Test setup, not cleaning
[2025-06-04 14:29:07] 2025-06-04 18:29:07,420 [wrapper] apfmon messages muted
[2025-06-04 14:29:07] 2025-06-04 18:29:07,423 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:29:07] 2025-06-04 18:29:07,426 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:29:07]  *** Error codes and diagnostics ***
[2025-06-04 14:29:07]     "exeErrorCode": 0,
[2025-06-04 14:29:07]     "exeErrorDiag": "",
[2025-06-04 14:29:07]     "pilotErrorCode": 0,
[2025-06-04 14:29:07]     "pilotErrorDiag": "",
[2025-06-04 14:29:07]  *** Listing of results directory ***
[2025-06-04 14:29:07] total 421200
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas      5111 May 28 05:02 queuedata.json
[2025-06-04 14:29:07] -rwx------ 1 boincer umatlas     37140 May 28 05:03 runpilot2-wrapper.sh
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas    495897 May 28 05:03 pilot3.tar.gz
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:29:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:43 run_atlas
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:43 job.xml
[2025-06-04 14:29:07] -rw-r--r-- 2 boincer umatlas 227345553 Jun  4 11:43 EVNT.44871834._003199.pool.root.1
[2025-06-04 14:29:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 14:29:07] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:43 shared
[2025-06-04 14:29:07] -rw-r--r-- 2 boincer umatlas    508865 Jun  4 11:43 input.tar.gz
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:43 boinc_lockfile
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 11:43 pandaJob.out
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas    990989 Jun  4 11:43 agis_schedconf.cvmfs.json
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas   1598969 Jun  4 11:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:29:07] drwx------ 4 boincer umatlas      4096 Jun  4 11:43 pilot3
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 14:27 init_data.xml
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas 197641847 Jun  4 14:28 HITS.44871837._081914.pool.root.1
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas       529 Jun  4 14:28 boinc_task_state.xml
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas      1049 Jun  4 14:28 memory_monitor_summary.json
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas        95 Jun  4 14:28 pilot_heartbeat.json
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas    350103 Jun  4 14:28 log.44871837._081914.job.log.tgz.1
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas      7745 Jun  4 14:28 heartbeat.json
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 14:28 boinc_mmap_file
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas        28 Jun  4 14:28 wrapper_checkpoint.txt
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas      4856 Jun  4 14:29 pilotlog.txt
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas    891178 Jun  4 14:29 log.44871837._081914.job.log.1
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas       357 Jun  4 14:29 output.list
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas       620 Jun  4 14:29 runtime_log
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas   1259520 Jun  4 14:29 result.tar.gz
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 14:29 runtime_log.err
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas       661 Jun  4 14:29 0vSLDmisRe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXlbKDmwxgJWo.diag
[2025-06-04 14:29:07] -rw-r--r-- 1 boincer umatlas     21153 Jun  4 14:29 stderr.txt
[2025-06-04 14:29:07] HITS file was successfully produced:
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas 197641847 Jun  4 14:28 shared/HITS.pool.root.1
[2025-06-04 14:29:07]  *** Contents of shared directory: ***
[2025-06-04 14:29:07] total 416788
[2025-06-04 14:29:07] -rw-r--r-- 2 boincer umatlas 227345553 Jun  4 11:43 ATLAS.root_0
[2025-06-04 14:29:07] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 14:29:07] -rw-r--r-- 2 boincer umatlas    508865 Jun  4 11:43 input.tar.gz
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas 197641847 Jun  4 14:28 HITS.pool.root.1
[2025-06-04 14:29:07] -rw------- 1 boincer umatlas   1259520 Jun  4 14:29 result.tar.gz
14:29:08 (18664): run_atlas exited; CPU time 73555.000010
14:29:08 (18664): called boinc_finish(0)

</stderr_txt>
]]>

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