Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:41 (18917): wrapper (7.7.26015): starting
02:51:41 (18917): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:51:41] Arguments: --nthreads 8
[2025-06-05 02:51:41] Threads: 8
[2025-06-05 02:51:41] Checking for CVMFS
[2025-06-05 02:51:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:51:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:51:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:51:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:51:42] 2.11.2.0 31978 34063 90132 146799 3 202 13509651 25165825 2640 130560 0 18262260 99.816 19740576 2519 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:51:42] CVMFS is ok
[2025-06-05 02:51:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:51:42] Checking for apptainer binary...
[2025-06-05 02:51:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:51:42] Running /usr/bin/apptainer --version
[2025-06-05 02:51:42] apptainer version 1.3.2-1.el7
[2025-06-05 02:51:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:51:43] cg-vwn266.simple-grid.lan
[2025-06-05 02:51:43] apptainer works
[2025-06-05 02:51:43] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:51:43] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:51:43] Starting ATLAS job with PandaID=6668051154
[2025-06-05 02:51:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:27:12]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:27:12] 2025-06-05 06:07:55,240 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:27:12] 2025-06-05 06:07:55,240 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:27:12] 2025-06-05 06:07:55,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:27:12] 2025-06-05 06:07:55,247 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:27:12] 2025-06-05 06:07:55,248 | INFO     | sum of square deviations: 9148487810.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,251 | INFO     | sum of deviations: -5747413534.000004
[2025-06-05 08:27:12] 2025-06-05 06:07:55,251 | INFO     | mean x: 1749094170.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,251 | INFO     | mean y: 2480432.0388349514
[2025-06-05 08:27:12] 2025-06-05 06:07:55,251 | INFO     | -- intersect: 1101325149.7319665
[2025-06-05 08:27:12] 2025-06-05 06:07:55,251 | INFO     | intersect: 1101325149.7319665
[2025-06-05 08:27:12] 2025-06-05 06:07:55,252 | INFO     | chi2: 3.5944639577458948
[2025-06-05 08:27:12] 2025-06-05 06:07:55,252 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,259 | INFO     | sum of deviations: 38608705965.99999
[2025-06-05 08:27:12] 2025-06-05 06:07:55,259 | INFO     | mean x: 1749094017.5
[2025-06-05 08:27:12] 2025-06-05 06:07:55,259 | INFO     | mean y: 2495757.9342105263
[2025-06-05 08:27:12] 2025-06-05 06:07:55,259 | INFO     | -- intersect: -7749328615.295765
[2025-06-05 08:27:12] 2025-06-05 06:07:55,259 | INFO     | intersect: -7749328615.295765
[2025-06-05 08:27:12] 2025-06-05 06:07:55,260 | INFO     | chi2: 1.751628900508223
[2025-06-05 08:27:12] 2025-06-05 06:07:55,260 | INFO     | current chi2=1.751628900508223 (change=51.268703175238464 %)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,260 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,263 | INFO     | sum of deviations: 37908308235.99999
[2025-06-05 08:27:12] 2025-06-05 06:07:55,264 | INFO     | mean x: 1749093865.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,264 | INFO     | mean y: 2495505.3076923075
[2025-06-05 08:27:12] 2025-06-05 06:07:55,264 | INFO     | -- intersect: -7996959291.645275
[2025-06-05 08:27:12] 2025-06-05 06:07:55,264 | INFO     | intersect: -7996959291.645275
[2025-06-05 08:27:12] 2025-06-05 06:07:55,264 | INFO     | chi2: 1.7522585958485783
[2025-06-05 08:27:12] 2025-06-05 06:07:55,265 | INFO     | current chi2=1.7522585958485783 (change=-0.0359491294173431 %)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,265 | INFO     | right removable region: 298
[2025-06-05 08:27:12] 2025-06-05 06:07:55,265 | INFO     | sum of square deviations: 8711530780.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,268 | INFO     | sum of deviations: -59461539801.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,268 | INFO     | mean x: 1749094322.5
[2025-06-05 08:27:12] 2025-06-05 06:07:55,269 | INFO     | mean y: 2499063.4802631577
[2025-06-05 08:27:12] 2025-06-05 06:07:55,269 | INFO     | -- intersect: 11941140422.793337
[2025-06-05 08:27:12] 2025-06-05 06:07:55,269 | INFO     | intersect: 11941140422.793337
[2025-06-05 08:27:12] 2025-06-05 06:07:55,269 | INFO     | chi2: 2.006146515443661
[2025-06-05 08:27:12] 2025-06-05 06:07:55,269 | INFO     | current chi2=2.006146515443661 (change=44.18788061233684 %)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,270 | INFO     | sum of square deviations: 8288713550.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,273 | INFO     | sum of deviations: -55384618038.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,273 | INFO     | mean x: 1749094475.0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,273 | INFO     | mean y: 2497573.408026756
[2025-06-05 08:27:12] 2025-06-05 06:07:55,273 | INFO     | -- intersect: 11689827437.793453
[2025-06-05 08:27:12] 2025-06-05 06:07:55,273 | INFO     | intersect: 11689827437.793453
[2025-06-05 08:27:12] 2025-06-05 06:07:55,274 | INFO     | chi2: 1.9891525170076023
[2025-06-05 08:27:12] 2025-06-05 06:07:55,274 | INFO     | current chi2=1.9891525170076023 (change=0.8470965757104882 %)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,274 | INFO     | left removable region: 20
[2025-06-05 08:27:12] 2025-06-05 06:07:55,275 | INFO     | sum of square deviations: 6662039329.5
[2025-06-05 08:27:12] 2025-06-05 06:07:55,281 | INFO     | sum of deviations: 8242192784.499999
[2025-06-05 08:27:12] 2025-06-05 06:07:55,282 | INFO     | mean x: 1749094444.5
[2025-06-05 08:27:12] 2025-06-05 06:07:55,282 | INFO     | mean y: 2505675.1834532376
[2025-06-05 08:27:12] 2025-06-05 06:07:55,282 | INFO     | -- intersect: -2161452370.8205943
[2025-06-05 08:27:12] 2025-06-05 06:07:55,282 | INFO     | intersect: -2161452370.8205943
[2025-06-05 08:27:12] 2025-06-05 06:07:55,282 | INFO     | chi2: 0.026185873118583173
[2025-06-05 08:27:12] 2025-06-05 06:07:55,283 | INFO     | -- intersect: -2161452370.8205943
[2025-06-05 08:27:12] 2025-06-05 06:07:55,283 | INFO     | current memory leak: 1.24 B/s (using 278 data points, chi2=0.03)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | ..............................
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . Timing measurements:
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . get job = 0 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . initial setup = 2 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . payload setup = 13 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . stage-in = 0 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . payload execution = 18809 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . stage-out = 3 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,284 | INFO     | . log creation = 1 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,285 | INFO     | ..............................
[2025-06-05 08:27:12] 2025-06-05 06:07:55,412 | INFO     | 
[2025-06-05 08:27:12] 2025-06-05 06:07:55,412 | INFO     | job summary report
[2025-06-05 08:27:12] 2025-06-05 06:07:55,412 | INFO     | --------------------------------------------------
[2025-06-05 08:27:12] 2025-06-05 06:07:55,412 | INFO     | PanDA job id: 6668051154
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | task id: 44871837
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | errors: (none)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | pilot state: finished 
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | transexitcode: 0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | exeerrorcode: 0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | exeerrordiag: 
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | exitcode: 0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | exitmsg: OK
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | cpuconsumptiontime: 72414 s
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | nevents: 400
[2025-06-05 08:27:12] 2025-06-05 06:07:55,413 | INFO     | neventsw: 0
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | pid: 29166
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | pgrp: 29166
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | corecount: 8
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | event service: False
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | sizes: {0: 2397220, 1: 2397419, 9: 2397625, 12: 2397653, 18826: 2429433, 18827: 2429432, 18831: 2438557, 18833: 2438613, 18934: 2438783}
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | --------------------------------------------------
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | 
[2025-06-05 08:27:12] 2025-06-05 06:07:55,414 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-05 08:27:12] 2025-06-05 06:07:55,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:27:12] 2025-06-05 06:07:55,935 | INFO     | job 6668051154 has completed (purged errors)
[2025-06-05 08:27:12] 2025-06-05 06:07:55,935 | INFO     | overall cleanup function is called
[2025-06-05 08:27:12] 2025-06-05 06:07:56,944 | INFO     | --- collectZombieJob: --- 10, [29166]
[2025-06-05 08:27:12] 2025-06-05 06:07:56,944 | INFO     | zombie collector waiting for pid 29166
[2025-06-05 08:27:12] 2025-06-05 06:07:56,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:27:12] 2025-06-05 06:07:56,945 | INFO     | collected zombie processes
[2025-06-05 08:27:12] 2025-06-05 06:07:56,945 | INFO     | will attempt to kill all subprocesses of pid=29166
[2025-06-05 08:27:12] 2025-06-05 06:07:57,061 | INFO     | process IDs to be killed: [29166] (in reverse order)
[2025-06-05 08:27:12] 2025-06-05 06:07:57,763 | INFO     | PID=22629 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-05 08:27:12] 2025-06-05 06:07:57,763 | INFO     | .. there are 9 such processes running
[2025-06-05 08:27:12] 2025-06-05 06:07:57,809 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:27:12] 2025-06-05 06:07:57,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:27:12] 2025-06-05 06:07:57,813 | INFO     | did not find any defunct processes belonging to 29166
[2025-06-05 08:27:12] 2025-06-05 06:07:57,816 | INFO     | did not find any defunct processes belonging to 29166
[2025-06-05 08:27:12] 2025-06-05 06:07:57,817 | INFO     | ready for new job
[2025-06-05 08:27:12] 2025-06-05 06:07:57,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:27:12] 2025-06-05 06:07:57,819 | INFO     | **************************************
[2025-06-05 08:27:12] 2025-06-05 06:07:57,819 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:27:12] 2025-06-05 06:07:57,819 | INFO     | **************************************
[2025-06-05 08:27:12] 2025-06-05 06:07:57,819 | INFO     | 
[2025-06-05 08:27:12] 2025-06-05 06:07:57,820 | INFO     | pilot is running in a VM
[2025-06-05 08:27:12] 2025-06-05 06:07:57,820 | INFO     | architecture information:
[2025-06-05 08:27:12] 2025-06-05 06:07:57,821 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:27:12] 2025-06-05 06:07:57,847 | INFO     | cat /etc/os-release:
[2025-06-05 08:27:12] NAME="CentOS Linux"
[2025-06-05 08:27:12] VERSION="7 (Core)"
[2025-06-05 08:27:12] ID="centos"
[2025-06-05 08:27:12] ID_LIKE="rhel fedora"
[2025-06-05 08:27:12] VERSION_ID="7"
[2025-06-05 08:27:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:27:12] ANSI_COLOR="0;31"
[2025-06-05 08:27:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:27:12] HOME_URL="https://www.centos.org/"
[2025-06-05 08:27:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:27:12] 
[2025-06-05 08:27:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:27:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:27:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:27:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:27:12] 
[2025-06-05 08:27:12] 2025-06-05 06:07:57,847 | INFO     | **************************************
[2025-06-05 08:27:12] 2025-06-05 06:07:58,351 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-05 08:27:12] 2025-06-05 06:07:58,585 | INFO     | sufficient remaining disk space (497440260096 B)
[2025-06-05 08:27:12] 2025-06-05 06:07:58,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:27:12] 2025-06-05 06:07:58,585 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:27:12] 2025-06-05 06:07:58,585 | INFO     | update_server=False
[2025-06-05 08:27:12] 2025-06-05 06:07:58,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:27:12] 2025-06-05 06:07:58,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:27:12] 2025-06-05 06:07:58,591 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:27:12] 2025-06-05 06:07:58,592 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:27:12] 2025-06-05 06:07:58,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:27:12] 2025-06-05 06:07:58,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:27:12] 2025-06-05 06:07:58,606 | INFO     | all job control threads have been joined
[2025-06-05 08:27:12] 2025-06-05 06:07:58,772 | INFO     | all data control threads have been joined
[2025-06-05 08:27:12] 2025-06-05 06:07:58,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:27:12] 2025-06-05 06:07:58,937 | INFO     | aborting loop
[2025-06-05 08:27:12] 2025-06-05 06:07:59,179 | INFO     | all payload control threads have been joined
[2025-06-05 08:27:12] 2025-06-05 06:07:59,591 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:07:59,612 | INFO     | [job] control thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:07:59,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:27:12] 2025-06-05 06:07:59,703 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:07:59,778 | INFO     | [data] control thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:07:59,943 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,014 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,182 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,185 | INFO     | [payload] control thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,315 | INFO     | [job] validate thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:27:12] 2025-06-05 06:08:00,485 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,578 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,595 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:00,603 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:01,433 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:03,694 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:27:12] 2025-06-05 06:08:04,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140224142026560)>', '<ExcThread(monitor, started 140223915136768)>']
[2025-06-05 08:27:12] 2025-06-05 06:08:05,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:27:12] 2025-06-05 06:08:05,636 | INFO     | [monitor] control thread has ended
[2025-06-05 08:27:12] 2025-06-05 06:08:09,718 | INFO     | all workflow threads have been joined
[2025-06-05 08:27:12] 2025-06-05 06:08:09,718 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:27:12] 2025-06-05 06:08:09,719 | INFO     | traces error code: 0
[2025-06-05 08:27:12] 2025-06-05 06:08:09,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:27:12] 2025-06-05 06:08:10,127 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:27:12] 2025-06-05 06:08:10,270 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:27:12] 2025-06-05 06:08:10,360 [wrapper] pilotpid: 22629
[2025-06-05 08:27:12] 2025-06-05 06:08:10,451 [wrapper] Pilot exit status: 0
[2025-06-05 08:27:12] 2025-06-05 06:08:11,023 [wrapper] pandaids: 6668051154
[2025-06-05 08:27:12] 2025-06-05 06:08:11,601 [wrapper] cleanup supervisor_pilot  3200 22630
[2025-06-05 08:27:12] 2025-06-05 06:08:11,643 [wrapper] Test setup, not cleaning
[2025-06-05 08:27:12] 2025-06-05 06:08:11,704 [wrapper] apfmon messages muted
[2025-06-05 08:27:12] 2025-06-05 06:08:11,775 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:27:12] 2025-06-05 06:08:11,901 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:27:12]  *** Error codes and diagnostics ***
[2025-06-05 08:27:12]     "exeErrorCode": 0,
[2025-06-05 08:27:12]     "exeErrorDiag": "",
[2025-06-05 08:27:12]     "pilotErrorCode": 0,
[2025-06-05 08:27:12]     "pilotErrorDiag": "",
[2025-06-05 08:27:12]  *** Listing of results directory ***
[2025-06-05 08:27:12] total 424400
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc    495897 May 28 06:31 pilot3.tar.gz
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc      5111 May 28 07:25 queuedata.json
[2025-06-05 08:27:12] -rwx------. 1 boinc boinc     37140 May 28 07:28 runpilot2-wrapper.sh
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:27:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:51 run_atlas
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:51 job.xml
[2025-06-05 08:27:12] -rw-r--r--. 2 boinc boinc 226247542 Jun  5 02:51 EVNT.44871834._003099.pool.root.1
[2025-06-05 08:27:12] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:51 start_atlas.sh
[2025-06-05 08:27:12] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:51 shared
[2025-06-05 08:27:12] -rw-r--r--. 2 boinc boinc    508881 Jun  5 02:51 input.tar.gz
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc      6391 Jun  5 02:51 init_data.xml
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:51 boinc_lockfile
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc      2558 Jun  5 02:51 pandaJob.out
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc    987117 Jun  5 02:51 agis_schedconf.cvmfs.json
[2025-06-05 08:27:12] drwx------. 4 boinc boinc      4096 Jun  5 02:52 pilot3
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc 200437769 Jun  5 08:04 HITS.44871837._079285.pool.root.1
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc       531 Jun  5 08:05 boinc_task_state.xml
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc      1017 Jun  5 08:06 memory_monitor_summary.json
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc   1598969 Jun  5 08:06 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc    425259 Jun  5 08:06 log.44871837._079285.job.log.tgz.1
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc      7685 Jun  5 08:07 heartbeat.json
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc        95 Jun  5 08:07 pilot_heartbeat.json
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc      4539 Jun  5 08:08 pilotlog.txt
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc   1614637 Jun  5 08:08 log.44871837._079285.job.log.1
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc       357 Jun  5 08:08 output.list
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc       620 Jun  5 08:08 runtime_log
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc   2058240 Jun  5 08:08 result.tar.gz
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc      8659 Jun  5 08:08 runtime_log.err
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc       656 Jun  5 08:08 I1ELDmgWOe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPySKDmhVs3sm.diag
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc        28 Jun  5 08:27 wrapper_checkpoint.txt
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc      8192 Jun  5 08:27 boinc_mmap_file
[2025-06-05 08:27:12] -rw-r--r--. 1 boinc boinc     20606 Jun  5 08:27 stderr.txt
[2025-06-05 08:27:12] HITS file was successfully produced:
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc 200437769 Jun  5 08:04 shared/HITS.pool.root.1
[2025-06-05 08:27:12]  *** Contents of shared directory: ***
[2025-06-05 08:27:12] total 419220
[2025-06-05 08:27:12] -rw-r--r--. 2 boinc boinc 226247542 Jun  5 02:51 ATLAS.root_0
[2025-06-05 08:27:12] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:51 start_atlas.sh
[2025-06-05 08:27:12] -rw-r--r--. 2 boinc boinc    508881 Jun  5 02:51 input.tar.gz
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc 200437769 Jun  5 08:04 HITS.pool.root.1
[2025-06-05 08:27:12] -rw-------. 1 boinc boinc   2058240 Jun  5 08:08 result.tar.gz
08:27:14 (18917): run_atlas exited; CPU time 72651.440719
08:27:14 (18917): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN